RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 CRYGBP07316 175 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 OPN1MW2P0DN77 364 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 OPN1MW3P0DN78 364 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 MYOD1P15172 320 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 RBMS3Q6XE24 437 aaKnown RBP8.72□□□□□ -1.01
BRCC3-204ENST00000369462 FAM71E2Q8N5Q1 922 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 OR8H1Q8NGG4 311 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 OR4D5Q8NGN0 318 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 OR2T35Q8NGX2 323 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 RBM14Q96PK6 669 aaKnown RBP8.72□□□□□ -1.01
BRCC3-204ENST00000369462 DUX5Q96PT3 197 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 QTRT1Q9BXR0 403 aaKnown RBP8.72□□□□□ -1.01
BRCC3-204ENST00000369462 C15orf61A6NNL5 157 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 ST8SIA3O43173 380 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 OR2F2O95006 317 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 NKX2-1P43699 371 aaPredicted RBP8.72□□□□□ -1.01
BRCC3-204ENST00000369462 RAP2BP61225 183 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 IL15RAQ13261 267 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 SCGB2A2Q13296 93 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 RAB32Q13637 225 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 PRSS8Q16651 343 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 Q8N9W7 124 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 OR4A5Q8NH83 315 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 OR5R1Q8NH85 324 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 MAGT1Q9H0U3 335 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 TMEM14BQ9NUH8 114 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 PRNDQ9UKY0 176 aa8.72□□□□□ -1.01
BRCC3-204ENST00000369462 SMLR1H3BR10 107 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 ACTL6BO94805 426 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 IFNA17P01571 189 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 MBPP02686 304 aaPredicted RBP8.71□□□□□ -1.02
BRCC3-204ENST00000369462 S100A10P60903 97 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 SRSF4Q08170 494 aaKnown RBP8.71□□□□□ -1.02
BRCC3-204ENST00000369462 MRGPRG-AS1Q2M3A8 158 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 Q5BKY6 102 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 MMD2Q8IY49 270 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 COMMD5Q9GZQ3 224 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 GNB1P62873 340 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 ID3Q02535 119 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 TNXAQ16473 311 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 SPINK9Q5DT21 86 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 C10orf55Q5SWW7 151 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 ZNF429Q86V71 674 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 RASL11BQ9BPW5 248 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 HINT2Q9BX68 163 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 FOXA2Q9Y261 457 aaPredicted RBP8.71□□□□□ -1.02
BRCC3-204ENST00000369462 MOB4Q9Y3A3 225 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 LSM5Q9Y4Y9 91 aaKnown RBP8.71□□□□□ -1.02
BRCC3-204ENST00000369462 OR51B2Q9Y5P1 312 aa8.71□□□□□ -1.02
BRCC3-204ENST00000369462 PSMB6P28072 239 aa8.7□□□□□ -1.02
BRCC3-204ENST00000369462 POLR2GP62487 172 aaKnown RBP eCLIP8.7□□□□□ -1.02
BRCC3-204ENST00000369462 TNFRSF9Q07011 255 aa8.7□□□□□ -1.02
BRCC3-204ENST00000369462 FKBP11Q9NYL4 201 aa8.7□□□□□ -1.02
BRCC3-204ENST00000369462 VPREB3Q9UKI3 123 aa8.7□□□□□ -1.02
BRCC3-204ENST00000369462 SH2D7A6NKC9 451 aaPredicted RBP8.7□□□□□ -1.02
BRCC3-204ENST00000369462 E7EUB6 86 aa8.7□□□□□ -1.02
BRCC3-204ENST00000369462 CHST1O43916 411 aa8.7□□□□□ -1.02
BRCC3-204ENST00000369462 CA2P00918 260 aa8.7□□□□□ -1.02
BRCC3-204ENST00000369462 HSPE1P61604 102 aaKnown RBP8.7□□□□□ -1.02
BRCC3-204ENST00000369462 C5orf56Q8N8D9 126 aa8.7□□□□□ -1.02
BRCC3-204ENST00000369462 ASB13Q8WXK3 278 aa8.7□□□□□ -1.02
BRCC3-204ENST00000369462 HSPB7Q9UBY9 170 aa8.7□□□□□ -1.02
BRCC3-204ENST00000369462 TEX50A0A1B0GTY4 177 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 WRBO00258 174 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 CNIH1O95406 144 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 MPC2O95563 127 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 PF4P02776 101 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 AMY1AP04745 511 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 AARDQ4LEZ3 155 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 CLUHP3Q96NS8 147 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 TET2Q6N021 2002 aaPredicted RBP8.69□□□□□ -1.02
BRCC3-204ENST00000369462 FAM90A26D6RGX4 464 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 K7EPK0 472 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 FGF16O43320 207 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 SYNGR2O43760 224 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 SPCS3P61009 180 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 CX3CL1P78423 397 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 SSBP2P81877 361 aaPredicted RBP8.69□□□□□ -1.02
BRCC3-204ENST00000369462 TCTE3Q8IZS6 198 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 OR1L8Q8NGR8 309 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 OR5B3Q8NH48 314 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 ZNF257Q9Y2Q1 563 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 POMT1Q9Y6A1 747 aa8.69□□□□□ -1.02
BRCC3-204ENST00000369462 CEBPZOSA8MTT3 80 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 H0YIZ8 118 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 SSSCA1O60232 199 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 COMPP49747 757 aaPredicted RBP8.68□□□□□ -1.02
BRCC3-204ENST00000369462 ZNF562Q6V9R5 426 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 OR52E5Q8NH55 327 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 RBKSQ9H477 322 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 RCL1Q9Y2P8 373 aaKnown RBP8.68□□□□□ -1.02
BRCC3-204ENST00000369462 JMJD1CQ15652 2540 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 TRAV14DV4A0A0A6YYC5 116 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 G3V3Q6 166 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 M0QZK8 103 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 HLA-DRB1P01911 266 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 RLN2P04090 185 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 FGF2P09038 288 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 MAS1LP35410 378 aa8.68□□□□□ -1.02
BRCC3-204ENST00000369462 RPL27AP46776 148 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms