RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 STPG2Q8N412 459 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 ARV1Q9H2C2 271 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 HIPK2Q9H2X6 1198 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 ZNF257Q9Y2Q1 563 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 LGALS7P47929 136 aa13.52□□□□□ -0.25
PHGDH-202ENST00000369409 RPL8P62917 257 aaKnown RBP13.52□□□□□ -0.25
PHGDH-202ENST00000369409 HBG1P69891 147 aa13.52□□□□□ -0.25
PHGDH-202ENST00000369409 HBG2P69892 147 aa13.52□□□□□ -0.25
PHGDH-202ENST00000369409 SSX2Q16385 188 aa13.52□□□□□ -0.25
PHGDH-202ENST00000369409 DEFB113Q30KQ7 82 aa13.52□□□□□ -0.25
PHGDH-202ENST00000369409 MINOS1Q5TGZ0 78 aa13.52□□□□□ -0.25
PHGDH-202ENST00000369409 LILRB2Q8N423 598 aa13.52□□□□□ -0.25
PHGDH-202ENST00000369409 OR4A5Q8NH83 315 aa13.52□□□□□ -0.25
PHGDH-202ENST00000369409 CFHR4Q92496 578 aa13.52□□□□□ -0.25
PHGDH-202ENST00000369409 GINS3Q9BRX5 216 aa13.52□□□□□ -0.25
PHGDH-202ENST00000369409 SLC25A32Q9H2D1 315 aa13.52□□□□□ -0.25
PHGDH-202ENST00000369409 BEX4Q9NWD9 120 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-202ENST00000369409 MINOS1-NBL1R4GNA1 71 aa13.52□□□□□ -0.25
PHGDH-202ENST00000369409 C15orf62A8K5M9 175 aa13.51□□□□□ -0.25
PHGDH-202ENST00000369409 DFFBO76075 338 aa13.51□□□□□ -0.25
PHGDH-202ENST00000369409 VENTXO95231 258 aa13.51□□□□□ -0.25
PHGDH-202ENST00000369409 UBE2E1P51965 193 aa13.51□□□□□ -0.25
PHGDH-202ENST00000369409 PRCDQ00LT1 54 aa13.51□□□□□ -0.25
PHGDH-202ENST00000369409 SLC38A11Q08AI6 406 aa13.51□□□□□ -0.25
PHGDH-202ENST00000369409 DYNAPQ8N1N2 210 aa13.51□□□□□ -0.25
PHGDH-202ENST00000369409 CXorf58Q96LI9 332 aa13.51□□□□□ -0.25
PHGDH-202ENST00000369409 TSNAXQ99598 290 aaKnown RBP13.51□□□□□ -0.25
PHGDH-202ENST00000369409 SH3BGRL3Q9H299 93 aa13.51□□□□□ -0.25
PHGDH-202ENST00000369409 ENY2Q9NPA8 101 aa13.51□□□□□ -0.25
PHGDH-202ENST00000369409 FKBP11Q9NYL4 201 aa13.51□□□□□ -0.25
PHGDH-202ENST00000369409 TEX50A0A1B0GTY4 177 aa13.5□□□□□ -0.25
PHGDH-202ENST00000369409 LY86O95711 162 aa13.5□□□□□ -0.25
PHGDH-202ENST00000369409 IFNA10P01566 189 aa13.5□□□□□ -0.25
PHGDH-202ENST00000369409 PAX8Q06710 450 aa13.5□□□□□ -0.25
PHGDH-202ENST00000369409 EIF5AL1Q6IS14 154 aaKnown RBP13.5□□□□□ -0.25
PHGDH-202ENST00000369409 OR5B3Q8NH48 314 aa13.5□□□□□ -0.25
PHGDH-202ENST00000369409 COMMD5Q9GZQ3 224 aa13.5□□□□□ -0.25
PHGDH-202ENST00000369409 ZNF430Q9H8G1 570 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-202ENST00000369409 PLEKHA3Q9HB20 300 aa13.5□□□□□ -0.25
PHGDH-202ENST00000369409 TBL2Q9Y4P3 447 aaKnown RBP13.5□□□□□ -0.25
PHGDH-202ENST00000369409 MAP1AP78559 2803 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-202ENST00000369409 PMS2P5A8MQ11 134 aa13.5□□□□□ -0.25
PHGDH-202ENST00000369409 MSMBP08118 114 aa13.5□□□□□ -0.25
PHGDH-202ENST00000369409 HABP2Q14520 560 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-202ENST00000369409 PSG5Q15238 335 aa13.5□□□□□ -0.25
PHGDH-202ENST00000369409 CCDC144NLQ6NUI1 221 aa13.5□□□□□ -0.25
PHGDH-202ENST00000369409 THNSL2Q86YJ6 484 aa13.5□□□□□ -0.25
PHGDH-202ENST00000369409 APCP25054 2843 aa13.5□□□□□ -0.25
PHGDH-202ENST00000369409 PLXNB1O43157 2135 aa13.5□□□□□ -0.25
PHGDH-202ENST00000369409 LINC00862A6NCI5 91 aa13.49□□□□□ -0.25
PHGDH-202ENST00000369409 IGKV1D-33P01593 117 aa13.49□□□□□ -0.25
PHGDH-202ENST00000369409 IGKV1-33P01594 117 aa13.49□□□□□ -0.25
PHGDH-202ENST00000369409 CD1BP29016 333 aa13.49□□□□□ -0.25
PHGDH-202ENST00000369409 SAA4P35542 130 aa13.49□□□□□ -0.25
PHGDH-202ENST00000369409 PJVKQ0ZLH3 352 aa13.49□□□□□ -0.25
PHGDH-202ENST00000369409 C10orf55Q5SWW7 151 aa13.49□□□□□ -0.25
PHGDH-202ENST00000369409 SLC25A24Q6NUK1 477 aa13.49□□□□□ -0.25
PHGDH-202ENST00000369409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.49□□□□□ -0.259e-8■□□□□ 11
PHGDH-202ENST00000369409 NBPF19A0A087WUL8 3843 aa13.49□□□□□ -0.25
PHGDH-202ENST00000369409 A0A096LNT2 108 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 OOSP1A8MZH6 123 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 OR8U8P0C7N1 319 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 SPP1P10451 314 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 CD24P25063 80 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 ATP6V0CP27449 155 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 RPP30P78346 268 aaKnown RBP13.48□□□□□ -0.25
PHGDH-202ENST00000369409 RUNX1Q01196 453 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 TEX45Q8NA69 505 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 SLC24A4Q8NFF2 622 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 OR10P1Q8NGE3 313 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 RNF141Q8WVD5 230 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 METTL1Q9UBP6 276 aaKnown RBP13.48□□□□□ -0.25
PHGDH-202ENST00000369409 CR1P17927 2039 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 NAV2Q8IVL1 2488 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 CENPVL3A0A0U1RRI6 287 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 UBE2L5PA0A1B0GUS4 154 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 RRHO14718 337 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 NPFFO15130 113 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 IFNA5P01569 189 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 SEC11BP0C7V7 166 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 MRGPRG-AS1Q2M3A8 158 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 LRRC75A-AS1Q8N1F1 130 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 OR1L8Q8NGR8 309 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 TMEM170AQ8WVE7 144 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 NDUFA4L2Q9NRX3 87 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 PLA2G2EQ9NZK7 142 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 SIGLEC9Q9Y336 463 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 RFNGQ9Y644 331 aa13.48□□□□□ -0.25
PHGDH-202ENST00000369409 NAV3Q8IVL0 2385 aa13.47□□□□□ -0.25
PHGDH-202ENST00000369409 TRAV40A0A0B4J280 105 aa13.47□□□□□ -0.25
PHGDH-202ENST00000369409 B4DSR2 109 aa13.47□□□□□ -0.25
PHGDH-202ENST00000369409 FGF16O43320 207 aa13.47□□□□□ -0.25
PHGDH-202ENST00000369409 CRYGBP07316 175 aa13.47□□□□□ -0.25
PHGDH-202ENST00000369409 SNRNP70P08621 437 aaKnown RBP13.47□□□□□ -0.25
PHGDH-202ENST00000369409 FAM157CP0CG43 387 aa13.47□□□□□ -0.25
PHGDH-202ENST00000369409 NPY1RP25929 384 aa13.47□□□□□ -0.25
PHGDH-202ENST00000369409 HES1Q14469 280 aa13.47□□□□□ -0.25
PHGDH-202ENST00000369409 HNF4GQ14541 408 aa13.47□□□□□ -0.25
PHGDH-202ENST00000369409 MMDQ15546 238 aa13.47□□□□□ -0.25
PHGDH-202ENST00000369409 FBLN7Q53RD9 439 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms