RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 CSPG4Q6UVK1 2322 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 MXRA5Q9NR99 2828 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 A0A1B0GW64 132 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 C15orf62A8K5M9 175 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 TAAR5O14804 337 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 TIMM23O14925 209 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 FBXO24O75426 580 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 IFNA17P01571 189 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 GAPDHP04406 335 aaKnown RBP11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 SULT1A1P50225 295 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 DVL1P1P54792 670 aaPredicted RBP11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 C10orf55Q5SWW7 151 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 C1orf122Q6ZSJ8 110 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 ZNF429Q86V71 674 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 OSR1Q8TAX0 266 aaPredicted RBP11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 CFHR4Q92496 578 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 RPEQ96AT9 228 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 MS4A7Q9GZW8 240 aaPredicted RBP11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 BARX1Q9HBU1 254 aaPredicted RBP11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 CGB1A6NKQ9 187 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 NDUFS8O00217 210 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 KBTBD11O94819 623 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 TOX4O94842 621 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 FAM157CP0CG43 387 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 B2MP61769 119 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 PDLIM3Q53GG5 364 aaPredicted RBP11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 THNSL2Q86YJ6 484 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 UBAC2Q8NBM4 344 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 HSD17B11Q8NBQ5 300 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 SLC25A31Q9H0C2 315 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 INSIG2Q9Y5U4 225 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 AUP1Q9Y679 476 aa11.34□□□□□ -0.59
HMGCS2-201ENST00000369406 SLC25A17O43808 307 aa11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 HTR1DP28221 377 aa11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 TAS2R30P59541 319 aa11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 SPCS3P61009 180 aa11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 RUNX1Q01196 453 aa11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 OR4C13Q8NGP0 309 aa11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 BET1LQ9NYM9 111 aa11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 POLR3KQ9Y2Y1 108 aaPredicted RBP11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 OR51B2Q9Y5P1 312 aa11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 TEX50A0A1B0GTY4 177 aa11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 FOXH1O75593 365 aa11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 RRASP10301 218 aa11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 CLEC12BQ2HXU8 276 aa11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 OR8G2PQ6IF36 304 aa11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 MAPK1IP1LQ8NDC0 245 aa11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 DPM3Q9P2X0 92 aa11.33□□□□□ -0.6
HMGCS2-201ENST00000369406 RRHO14718 337 aa11.32□□□□□ -0.6
HMGCS2-201ENST00000369406 MED6O75586 246 aa11.32□□□□□ -0.6
HMGCS2-201ENST00000369406 BAXQ07812 192 aa11.32□□□□□ -0.6
HMGCS2-201ENST00000369406 SSX2Q16385 188 aa11.32□□□□□ -0.6
HMGCS2-201ENST00000369406 OR10W1Q8NGF6 305 aa11.32□□□□□ -0.6
HMGCS2-201ENST00000369406 OR52E5Q8NH55 327 aa11.32□□□□□ -0.6
HMGCS2-201ENST00000369406 PHYHIPLQ96FC7 376 aa11.32□□□□□ -0.6
HMGCS2-201ENST00000369406 GINS3Q9BRX5 216 aa11.32□□□□□ -0.6
HMGCS2-201ENST00000369406 ZNF430Q9H8G1 570 aaPredicted RBP11.32□□□□□ -0.6
HMGCS2-201ENST00000369406 AMMECR1Q9Y4X0 333 aaPredicted RBP11.32□□□□□ -0.6
HMGCS2-201ENST00000369406 CREBBPQ92793 2442 aa11.32□□□□□ -0.6
HMGCS2-201ENST00000369406 IGHV3OR16-10A0A075B7F0 116 aa11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 JTBO76095 146 aa11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 CRYGBP07316 175 aa11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 PIP4P2Q8N4L2 257 aa11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 HINT2Q9BX68 163 aa11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 PRRC2AP48634 2157 aaKnown RBP11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 FLNAP21333 2647 aaKnown RBP11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 VENTXO95231 258 aa11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 ARHGDIBP52566 201 aa11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 F2RL1P55085 397 aa11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 HSPE1P61604 102 aaKnown RBP11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 SSBP2P81877 361 aaPredicted RBP11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 PAX8Q06710 450 aa11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 COMMD7Q86VX2 200 aa11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 STX12Q86Y82 276 aa11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 OR1S2Q8NGQ3 325 aa11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 TMEM167AQ8TBQ9 72 aa11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 ATP5SQ99766 215 aa11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 SOX21Q9Y651 276 aaPredicted RBP11.31□□□□□ -0.6
HMGCS2-201ENST00000369406 MC5RP33032 325 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 RAB13P51153 203 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 AANATQ16613 207 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 RUSC1-AS1Q66K80 236 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 STPG2Q8N412 459 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 MARC2Q969Z3 335 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 SLC25A32Q9H2D1 315 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 TLN2Q9Y4G6 2542 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 FGF16O43320 207 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 ATP6V0CP27449 155 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 HOXA1P49639 335 aaPredicted RBP11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 FHITP49789 147 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 SLC38A11Q08AI6 406 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 HABP2Q14520 560 aaPredicted RBP11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 HNF4GQ14541 408 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 PSG5Q15238 335 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 KRTAP1-3Q8IUG1 177 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 PRNDQ9UKY0 176 aa11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 STRAPQ9Y3F4 350 aaKnown RBP11.3□□□□□ -0.6
HMGCS2-201ENST00000369406 CENPVL3A0A0U1RRI6 287 aa11.29□□□□□ -0.6
HMGCS2-201ENST00000369406 PRSS46E5RG02 174 aa11.29□□□□□ -0.6
HMGCS2-201ENST00000369406 SPP1P10451 314 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms