RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 SPATA12Q7Z6I5 190 aa13.43□□□□□ -0.26
CHD1L-203ENST00000369259 SPACA3Q8IXA5 215 aa13.43□□□□□ -0.26
CHD1L-203ENST00000369259 TP73-AS1Q9UF72 201 aa13.43□□□□□ -0.26
CHD1L-203ENST00000369259 MPC1Q9Y5U8 109 aa13.43□□□□□ -0.26
CHD1L-203ENST00000369259 LOC102724200A0A096LPH7 203 aaPredicted RBP13.43□□□□□ -0.26
CHD1L-203ENST00000369259 SS18L1O75177 396 aaPredicted RBP13.43□□□□□ -0.26
CHD1L-203ENST00000369259 SSTR5P35346 364 aa13.43□□□□□ -0.26
CHD1L-203ENST00000369259 CA7P43166 264 aa13.43□□□□□ -0.26
CHD1L-203ENST00000369259 B3GALT5-AS1P59052 145 aa13.43□□□□□ -0.26
CHD1L-203ENST00000369259 KLF5Q13887 457 aaPredicted RBP13.43□□□□□ -0.26
CHD1L-203ENST00000369259 IBA57Q5T440 356 aaKnown RBP13.43□□□□□ -0.26
CHD1L-203ENST00000369259 C12orf54Q6X4T0 127 aa13.43□□□□□ -0.26
CHD1L-203ENST00000369259 WDR31Q8NA23 367 aa13.43□□□□□ -0.26
CHD1L-203ENST00000369259 PRRG4Q9BZD6 226 aa13.43□□□□□ -0.26
CHD1L-203ENST00000369259 IL19Q9UHD0 177 aa13.43□□□□□ -0.26
CHD1L-203ENST00000369259 KIAA1549Q9HCM3 1950 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 MUC21A0A0G2JKD1 596 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 MUC21A0A140T8X8 626 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 PRSS46E5RG02 174 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 CELA3BP08861 270 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 NPY1RP25929 384 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 CD27P26842 260 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 PSG9Q00887 426 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 MUC21Q5SSG8 566 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 GGNQ86UU5 652 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 OR52L2PQ8NGH6 319 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 NINJ1Q92982 152 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 TMEM45BQ96B21 275 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 GALMQ96C23 342 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 MEGF9Q9H1U4 602 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 TNFRSF19Q9NS68 423 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 SERTAD4Q9NUC0 356 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 ARL2-SNX15V9GYD0 113 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 J3QT63 122 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 ESPL1Q14674 2120 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 RASL11AQ6T310 242 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 YRDCQ86U90 279 aaKnown RBP13.42□□□□□ -0.26
CHD1L-203ENST00000369259 WIPF2Q8TF74 440 aaPredicted RBP13.42□□□□□ -0.26
CHD1L-203ENST00000369259 TMEM70Q9BUB7 260 aa13.42□□□□□ -0.26
CHD1L-203ENST00000369259 A0A096LPE4 126 aa13.41□□□□□ -0.26
CHD1L-203ENST00000369259 A0A1W2PPZ6 126 aa13.41□□□□□ -0.26
CHD1L-203ENST00000369259 OR4C46A6NHA9 309 aa13.41□□□□□ -0.26
CHD1L-203ENST00000369259 CORTO00230 105 aa13.41□□□□□ -0.26
CHD1L-203ENST00000369259 OR9G9P0C7N8 305 aa13.41□□□□□ -0.26
CHD1L-203ENST00000369259 FAM53AQ6NSI3 398 aaPredicted RBP13.41□□□□□ -0.26
CHD1L-203ENST00000369259 RNASEKQ6P5S7 137 aaKnown RBP13.41□□□□□ -0.26
CHD1L-203ENST00000369259 SLC25A34Q6PIV7 304 aa13.41□□□□□ -0.26
CHD1L-203ENST00000369259 KIR3DL3Q8N743 410 aa13.41□□□□□ -0.26
CHD1L-203ENST00000369259 SAP30LQ9HAJ7 183 aa13.41□□□□□ -0.26
CHD1L-203ENST00000369259 LSM4Q9Y4Z0 139 aaKnown RBP13.41□□□□□ -0.26
CHD1L-203ENST00000369259 CD5LO43866 347 aa13.4□□□□□ -0.26
CHD1L-203ENST00000369259 NBEAP1P0C6P0 100 aa13.4□□□□□ -0.26
CHD1L-203ENST00000369259 COL8A2P25067 703 aa13.4□□□□□ -0.26
CHD1L-203ENST00000369259 DUSP3P51452 185 aaPredicted RBP13.4□□□□□ -0.26
CHD1L-203ENST00000369259 STPG3Q8N7X2 389 aa13.4□□□□□ -0.26
CHD1L-203ENST00000369259 C1orf159Q96HA4 380 aa13.4□□□□□ -0.26
CHD1L-203ENST00000369259 NPVFQ9HCQ7 196 aa13.4□□□□□ -0.26
CHD1L-203ENST00000369259 HEYLQ9NQ87 328 aaPredicted RBP13.4□□□□□ -0.26
CHD1L-203ENST00000369259 TNRC6BQ9UPQ9 1833 aaKnown RBP13.4□□□□□ -0.26
CHD1L-203ENST00000369259 TRANK1O15050 2925 aa13.4□□□□□ -0.26
CHD1L-203ENST00000369259 Q6ZS52 159 aa13.4□□□□□ -0.26
CHD1L-203ENST00000369259 OR10D3Q8NH80 312 aa13.4□□□□□ -0.26
CHD1L-203ENST00000369259 SH2D2AQ9NP31 389 aa13.4□□□□□ -0.26
CHD1L-203ENST00000369259 USF3Q68DE3 2245 aa13.4□□□□□ -0.26
CHD1L-203ENST00000369259 LINC00473A8K010 186 aa13.39□□□□□ -0.27
CHD1L-203ENST00000369259 IGLV2-8P01709 118 aa13.39□□□□□ -0.27
CHD1L-203ENST00000369259 MGST1P10620 155 aaKnown RBP13.39□□□□□ -0.27
CHD1L-203ENST00000369259 PCOLCEQ15113 449 aa13.39□□□□□ -0.27
CHD1L-203ENST00000369259 C9orf135Q5VTT2 229 aa13.39□□□□□ -0.27
CHD1L-203ENST00000369259 GP6Q9HCN6 339 aa13.39□□□□□ -0.27
CHD1L-203ENST00000369259 REV3LO60673 3130 aa13.39□□□□□ -0.27
CHD1L-203ENST00000369259 CRXO43186 299 aaPredicted RBP13.39□□□□□ -0.27
CHD1L-203ENST00000369259 RIPPLY3P57055 190 aa13.39□□□□□ -0.27
CHD1L-203ENST00000369259 LINC00205P59089 165 aa13.39□□□□□ -0.27
CHD1L-203ENST00000369259 PSG5Q15238 335 aa13.39□□□□□ -0.27
CHD1L-203ENST00000369259 ABHD3Q8WU67 409 aa13.39□□□□□ -0.27
CHD1L-203ENST00000369259 PHF7Q9BWX1 381 aaPredicted RBP13.39□□□□□ -0.27
CHD1L-203ENST00000369259 TMEM167BQ9NRX6 74 aa13.39□□□□□ -0.27
CHD1L-203ENST00000369259 C1RLQ9NZP8 487 aa13.39□□□□□ -0.27
CHD1L-203ENST00000369259 CLCF1Q9UBD9 225 aa13.39□□□□□ -0.27
CHD1L-203ENST00000369259 SPEGQ15772 3267 aa13.39□□□□□ -0.27
CHD1L-203ENST00000369259 IGHV1OR15-9A0A0B4J2B8 117 aa13.38□□□□□ -0.27
CHD1L-203ENST00000369259 C12orf77C9JDV5 145 aa13.38□□□□□ -0.27
CHD1L-203ENST00000369259 GATA2P23769 480 aaPredicted RBP13.38□□□□□ -0.27
CHD1L-203ENST00000369259 VDAC2P45880 294 aaPredicted RBP13.38□□□□□ -0.27
CHD1L-203ENST00000369259 SSR4P51571 173 aa13.38□□□□□ -0.27
CHD1L-203ENST00000369259 RPL8P62917 257 aaKnown RBP13.38□□□□□ -0.27
CHD1L-203ENST00000369259 VWA1Q6PCB0 445 aa13.38□□□□□ -0.27
CHD1L-203ENST00000369259 COMMD5Q9GZQ3 224 aa13.38□□□□□ -0.27
CHD1L-203ENST00000369259 CLEC5AQ9NY25 188 aa13.38□□□□□ -0.27
CHD1L-203ENST00000369259 PEF1Q9UBV8 284 aaKnown RBP13.38□□□□□ -0.27
CHD1L-203ENST00000369259 SLC25A10Q9UBX3 287 aaPredicted RBP13.38□□□□□ -0.27
CHD1L-203ENST00000369259 TRAV8-6A0A0B4J262 113 aa13.38□□□□□ -0.27
CHD1L-203ENST00000369259 CA1P00915 261 aaPredicted RBP13.38□□□□□ -0.27
CHD1L-203ENST00000369259 REG1BP48304 166 aa13.38□□□□□ -0.27
CHD1L-203ENST00000369259 TEPPQ6URK8 271 aa13.38□□□□□ -0.27
CHD1L-203ENST00000369259 MIR17HGQ75NE6 70 aa13.38□□□□□ -0.27
CHD1L-203ENST00000369259 Q8IYB0 196 aa13.38□□□□□ -0.27
CHD1L-203ENST00000369259 OR2Y1Q8NGV0 311 aa13.38□□□□□ -0.27
CHD1L-203ENST00000369259 CDX2Q99626 313 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms