RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 TMEM186Q96B77 213 aa8.4□□□□□ -1.06
TPM3-209ENST00000368527 RPUSD4Q96CM3 377 aaKnown RBP8.4□□□□□ -1.06
TPM3-209ENST00000368527 ZNF714Q96N38 554 aa8.4□□□□□ -1.06
TPM3-209ENST00000368527 CCL13Q99616 98 aa8.4□□□□□ -1.06
TPM3-209ENST00000368527 TMEM167BQ9NRX6 74 aa8.4□□□□□ -1.06
TPM3-209ENST00000368527 GAR1Q9NY12 217 aaKnown RBP8.4□□□□□ -1.06
TPM3-209ENST00000368527 KAAG1Q9UBP8 84 aa8.4□□□□□ -1.06
TPM3-209ENST00000368527 Q9UFV3 132 aa8.4□□□□□ -1.06
TPM3-209ENST00000368527 PITPNC1Q9UKF7 332 aa8.4□□□□□ -1.06
TPM3-209ENST00000368527 PPIAL4AQ9Y536 164 aa8.4□□□□□ -1.06
TPM3-209ENST00000368527 GVINP1Q7Z2Y8 2422 aa8.4□□□□□ -1.07
TPM3-209ENST00000368527 TRBV23-1A0A0A0MS06 115 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 TMEM178BH3BS89 294 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 RRHO14718 337 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 GYPAP02724 150 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 TYMSP04818 313 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 PFN1P07737 140 aaKnown RBP8.39□□□□□ -1.07
TPM3-209ENST00000368527 CXCL1P09341 107 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 AREGP15514 252 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 NDUFB7P17568 137 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 USF1P22415 310 aaPredicted RBP8.39□□□□□ -1.07
TPM3-209ENST00000368527 CCKARP32238 428 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 MC5RP33032 325 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 GALR1P47211 349 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 SUB1P53999 127 aaKnown RBP eCLIP8.39□□□□□ -1.07
TPM3-209ENST00000368527 TAS2R45P59539 299 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 RPL31P62899 125 aaKnown RBP8.39□□□□□ -1.07
TPM3-209ENST00000368527 ERHP84090 104 aaKnown RBP8.39□□□□□ -1.07
TPM3-209ENST00000368527 EFNB3Q15768 340 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 FAM53AQ6NSI3 398 aaPredicted RBP8.39□□□□□ -1.07
TPM3-209ENST00000368527 SPNS3Q6ZMD2 512 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 TMEM144Q7Z5S9 345 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 PDPNQ86YL7 162 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 WFDC8Q8IUA0 241 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 NEUROG1Q92886 237 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 ACY3Q96HD9 319 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 MGST2Q99735 147 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 OR51M1Q9H341 326 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 SAP30LQ9HAJ7 183 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 SLC45A2Q9UMX9 530 aa8.39□□□□□ -1.07
TPM3-209ENST00000368527 EP300Q09472 2414 aaPredicted RBP8.39□□□□□ -1.07
TPM3-209ENST00000368527 SPTBN4Q9H254 2564 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 TGIF2-C20orf24A0A0A6YYL0 155 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 A0A1W2PPE3 182 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 HMGB3O15347 200 aaKnown RBP8.38□□□□□ -1.07
TPM3-209ENST00000368527 SLC31A2O15432 143 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 HIST1H2BKO60814 126 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 GGCTO75223 188 aaKnown RBP8.38□□□□□ -1.07
TPM3-209ENST00000368527 YIF1AO95070 293 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 CA2P00918 260 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 HIST1H2BJP06899 126 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 HIST1H2BOP23527 126 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 HIST1H2BBP33778 126 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 ZNF137PP52743 207 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 UCNP55089 124 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 CASP6P55212 293 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 NDUFA6P56556 154 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 HIST1H2BDP58876 126 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 B2MP61769 119 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 HIST1H2BCP62807 126 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 HIST2H2BEQ16778 126 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.38□□□□□ -1.07
TPM3-209ENST00000368527 ZNF343Q6P1L6 599 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 PQLC2Q6ZP29 291 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 C16orf82Q7Z2V1 217 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 RPRMLQ8N4K4 120 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 DEFB108BQ8NET1 73 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 OR5AN1Q8NGI8 311 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 OR51G1Q8NGK1 321 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 OR2T10Q8NGZ9 312 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 RNASEH2CQ8TDP1 164 aaKnown RBP8.38□□□□□ -1.07
TPM3-209ENST00000368527 ZCCHC14Q8WYQ9 949 aaKnown RBP8.38□□□□□ -1.07
TPM3-209ENST00000368527 RND1Q92730 232 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 HIST1H2BHQ93079 126 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 C11orf52Q96A22 123 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 ABHD17AQ96GS6 310 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 HIST1H2BNQ99877 126 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 HIST1H2BMQ99879 126 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 VKORC1Q9BQB6 163 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 MRPL32Q9BYC8 188 aaKnown RBP8.38□□□□□ -1.07
TPM3-209ENST00000368527 COMMD5Q9GZQ3 224 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 URGCP-MRPS24S4R325 110 aa8.38□□□□□ -1.07
TPM3-209ENST00000368527 INTS1Q8N201 2190 aaKnown RBP8.38□□□□□ -1.07
TPM3-209ENST00000368527 A0A087X0M5 115 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 A0A1B0GX30 115 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 DPRXA6NFQ7 191 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 B9A039 149 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 C9JCJ5 164 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 RBP4P02753 201 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 TRGC2P03986 189 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 CT45A6P0DMU7 189 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 CT45A5P0DMU8 189 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 CT45A7P0DMV0 189 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 GCHFRP30047 84 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 LGALS7P47929 136 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 PRR20EP86478 221 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 PRR20CP86479 221 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 PRR20DP86480 221 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 PRR20BP86481 221 aa8.37□□□□□ -1.07
TPM3-209ENST00000368527 PRR20AP86496 221 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms