RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 BCL7BQ9BQE9 202 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 RSRP1Q9BUV0 290 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 HRASLSQ9HDD0 168 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 TMEM140Q9NV12 185 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 MTFP1Q9UDX5 166 aa14.5□□□□□ -0.09
CKS1B-203ENST00000368439 M0QYG6 137 aa14.49□□□□□ -0.09
CKS1B-203ENST00000368439 CTRB1P17538 263 aa14.49□□□□□ -0.09
CKS1B-203ENST00000368439 PSMB6P28072 239 aa14.49□□□□□ -0.09
CKS1B-203ENST00000368439 UCP3P55916 312 aa14.49□□□□□ -0.09
CKS1B-203ENST00000368439 ATP5G2Q06055 141 aa14.49□□□□□ -0.09
CKS1B-203ENST00000368439 CTRB2Q6GPI1 263 aa14.49□□□□□ -0.09
CKS1B-203ENST00000368439 LAX1Q8IWV1 398 aa14.49□□□□□ -0.09
CKS1B-203ENST00000368439 CMTM1Q8IZ96 169 aa14.49□□□□□ -0.09
CKS1B-203ENST00000368439 FCAMRQ8WWV6 532 aa14.49□□□□□ -0.09
CKS1B-203ENST00000368439 DMRT1Q9Y5R6 373 aa14.49□□□□□ -0.09
CKS1B-203ENST00000368439 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.48□□□□□ -0.09
CKS1B-203ENST00000368439 MARCH11A6NNE9 402 aa14.48□□□□□ -0.09
CKS1B-203ENST00000368439 OR2J3O76001 311 aa14.48□□□□□ -0.09
CKS1B-203ENST00000368439 RPA2P15927 270 aa14.48□□□□□ -0.09
CKS1B-203ENST00000368439 SPNP16150 400 aa14.48□□□□□ -0.09
CKS1B-203ENST00000368439 LPAR6P43657 344 aa14.48□□□□□ -0.09
CKS1B-203ENST00000368439 RPL5P46777 297 aaKnown RBP14.48□□□□□ -0.09
CKS1B-203ENST00000368439 DCTN2Q13561 401 aaKnown RBP14.48□□□□□ -0.09
CKS1B-203ENST00000368439 EXOSC2Q13868 293 aaKnown RBP14.48□□□□□ -0.09
CKS1B-203ENST00000368439 LPCAT3Q6P1A2 487 aa14.48□□□□□ -0.09
CKS1B-203ENST00000368439 LHFPL1Q86WI0 220 aa14.48□□□□□ -0.09
CKS1B-203ENST00000368439 CADM3Q8N126 398 aa14.48□□□□□ -0.09
CKS1B-203ENST00000368439 IGLC7A0M8Q6 106 aa14.47□□□□□ -0.09
CKS1B-203ENST00000368439 BMPR1BO00238 502 aa14.47□□□□□ -0.09
CKS1B-203ENST00000368439 CD3DP04234 171 aa14.47□□□□□ -0.09
CKS1B-203ENST00000368439 SYNJ2BPP57105 145 aa14.47□□□□□ -0.09
CKS1B-203ENST00000368439 C15orf32Q32M92 178 aa14.47□□□□□ -0.09
CKS1B-203ENST00000368439 PHLDA2Q53GA4 152 aa14.47□□□□□ -0.09
CKS1B-203ENST00000368439 DMBX1Q8NFW5 382 aa14.47□□□□□ -0.09
CKS1B-203ENST00000368439 FAM212BQ9NTI7 297 aaPredicted RBP14.47□□□□□ -0.09
CKS1B-203ENST00000368439 CCDC59Q9P031 241 aaKnown RBP14.47□□□□□ -0.09
CKS1B-203ENST00000368439 HUWE1Q7Z6Z7 4374 aaKnown RBP14.47□□□□□ -0.09
CKS1B-203ENST00000368439 DPPA5A6NC42 116 aa14.46□□□□□ -0.09
CKS1B-203ENST00000368439 NDUFB8O95169 186 aa14.46□□□□□ -0.09
CKS1B-203ENST00000368439 IGLV1-51P01701 117 aa14.46□□□□□ -0.09
CKS1B-203ENST00000368439 CD74P04233 296 aa14.46□□□□□ -0.09
CKS1B-203ENST00000368439 REG1AP05451 166 aa14.46□□□□□ -0.09
CKS1B-203ENST00000368439 TBC1D26Q86UD7 250 aa14.46□□□□□ -0.09
CKS1B-203ENST00000368439 HAPLN4Q86UW8 402 aa14.46□□□□□ -0.09
CKS1B-203ENST00000368439 SLC38A6Q8IZM9 456 aa14.46□□□□□ -0.09
CKS1B-203ENST00000368439 OR9G4Q8NGQ1 327 aa14.46□□□□□ -0.09
CKS1B-203ENST00000368439 OR6Q1Q8NGQ2 317 aa14.46□□□□□ -0.09
CKS1B-203ENST00000368439 C15orf40Q8WUR7 153 aa14.46□□□□□ -0.09
CKS1B-203ENST00000368439 OR4C12Q96R67 309 aa14.46□□□□□ -0.09
CKS1B-203ENST00000368439 ELOVL1Q9BW60 279 aa14.46□□□□□ -0.09
CKS1B-203ENST00000368439 FBXL7Q9UJT9 491 aa14.46□□□□□ -0.09
CKS1B-203ENST00000368439 IGLV11-55A0A075B6I3 123 aa14.45□□□□□ -0.1
CKS1B-203ENST00000368439 H3BMQ9 156 aa14.45□□□□□ -0.1
CKS1B-203ENST00000368439 GABARAPH6UMI1 98 aa14.45□□□□□ -0.1
CKS1B-203ENST00000368439 RGS5O15539 181 aa14.45□□□□□ -0.1
CKS1B-203ENST00000368439 G6PCP35575 357 aa14.45□□□□□ -0.1
CKS1B-203ENST00000368439 RPEL1Q2QD12 228 aa14.45□□□□□ -0.1
CKS1B-203ENST00000368439 RNASE10Q5GAN6 216 aaKnown RBP14.45□□□□□ -0.1
CKS1B-203ENST00000368439 ARRDC1Q8N5I2 433 aa14.45□□□□□ -0.1
CKS1B-203ENST00000368439 OR4D10Q8NGI6 311 aa14.45□□□□□ -0.1
CKS1B-203ENST00000368439 SRSF8Q9BRL6 282 aaKnown RBP14.45□□□□□ -0.1
CKS1B-203ENST00000368439 COMMD5Q9GZQ3 224 aa14.45□□□□□ -0.1
CKS1B-203ENST00000368439 TEX50A0A1B0GTY4 177 aa14.44□□□□□ -0.1
CKS1B-203ENST00000368439 LY86O95711 162 aa14.44□□□□□ -0.1
CKS1B-203ENST00000368439 KRASP01116 189 aa14.44□□□□□ -0.1
CKS1B-203ENST00000368439 IGKV1-39P01597 117 aa14.44□□□□□ -0.1
CKS1B-203ENST00000368439 IGKV1D-39P04432 117 aa14.44□□□□□ -0.1
CKS1B-203ENST00000368439 CSN3P07498 182 aa14.44□□□□□ -0.1
CKS1B-203ENST00000368439 GP9P14770 177 aa14.44□□□□□ -0.1
CKS1B-203ENST00000368439 TBPP20226 339 aa14.44□□□□□ -0.1
CKS1B-203ENST00000368439 PTBP1P26599 531 aaKnown RBP eCLIP14.44□□□□□ -0.1
CKS1B-203ENST00000368439 ERVK-16P61578 105 aa14.44□□□□□ -0.1
CKS1B-203ENST00000368439 CD69Q07108 199 aa14.44□□□□□ -0.1
CKS1B-203ENST00000368439 C11orf87Q6NUJ2 197 aa14.44□□□□□ -0.1
CKS1B-203ENST00000368439 TMEM229BQ8NBD8 167 aa14.44□□□□□ -0.1
CKS1B-203ENST00000368439 OR10W1Q8NGF6 305 aa14.44□□□□□ -0.1
CKS1B-203ENST00000368439 ISOC1Q96CN7 298 aa14.44□□□□□ -0.1
CKS1B-203ENST00000368439 CCDC140Q96MF4 163 aa14.44□□□□□ -0.1
CKS1B-203ENST00000368439 SLIRPQ9GZT3 109 aaKnown RBP14.44□□□□□ -0.1
CKS1B-203ENST00000368439 PPP5D1E7EU14 171 aa14.43□□□□□ -0.1
CKS1B-203ENST00000368439 HIST1H1BP16401 226 aaKnown RBP14.43□□□□□ -0.1
CKS1B-203ENST00000368439 RND3P61587 244 aa14.43□□□□□ -0.1
CKS1B-203ENST00000368439 SEC22AQ96IW7 307 aa14.43□□□□□ -0.1
CKS1B-203ENST00000368439 QTRT1Q9BXR0 403 aaKnown RBP14.43□□□□□ -0.1
CKS1B-203ENST00000368439 NDUFA4L2Q9NRX3 87 aa14.43□□□□□ -0.1
CKS1B-203ENST00000368439 SIGLEC8Q9NYZ4 499 aa14.43□□□□□ -0.1
CKS1B-203ENST00000368439 NSG2Q9Y328 171 aa14.43□□□□□ -0.1
CKS1B-203ENST00000368439 CEPT1Q9Y6K0 416 aa14.43□□□□□ -0.1
CKS1B-203ENST00000368439 DBX1A6NMT0 343 aa14.42□□□□□ -0.1
CKS1B-203ENST00000368439 CTDSPLO15194 276 aa14.42□□□□□ -0.1
CKS1B-203ENST00000368439 DHFRP00374 187 aa14.42□□□□□ -0.1
CKS1B-203ENST00000368439 IFNA6P05013 189 aa14.42□□□□□ -0.1
CKS1B-203ENST00000368439 TAS2R19P59542 299 aa14.42□□□□□ -0.1
CKS1B-203ENST00000368439 MRPS10P82664 201 aaKnown RBP14.42□□□□□ -0.1
CKS1B-203ENST00000368439 SSBP1Q04837 148 aaKnown RBP14.42□□□□□ -0.1
CKS1B-203ENST00000368439 WT1-ASQ06250 92 aa14.42□□□□□ -0.1
CKS1B-203ENST00000368439 FAM209BQ5JX69 171 aa14.42□□□□□ -0.1
CKS1B-203ENST00000368439 THOC7Q6I9Y2 204 aaKnown RBP14.42□□□□□ -0.1
CKS1B-203ENST00000368439 SMIM4Q8WVI0 70 aa14.42□□□□□ -0.1
CKS1B-203ENST00000368439 MRGPRFQ96AM1 343 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms