RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 ARL14EPLP0DKL9 152 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 GZMBP10144 247 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 MGST1P10620 155 aaKnown RBP7.41□□□□□ -1.22
THBS3-201ENST00000368378 ZNF83P51522 516 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 FOXF2Q12947 444 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 TRIP6Q15654 476 aaKnown RBP7.41□□□□□ -1.22
THBS3-201ENST00000368378 TDRG1Q3Y452 100 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 SPRNQ5BIV9 151 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 Q6P435 159 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 TOMM20LQ6UXN7 152 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 YPEL4Q96NS1 127 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 DDA1Q9BW61 102 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 ACTR3CQ9C0K3 210 aaPredicted RBP7.41□□□□□ -1.22
THBS3-201ENST00000368378 PPIAL4AQ9Y536 164 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 IGHV3-21A0A0B4J1V1 117 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 FOXH1O75593 365 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 PLAUP00749 431 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 CA1P00915 261 aaPredicted RBP7.41□□□□□ -1.22
THBS3-201ENST00000368378 NPPCP23582 126 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 GCH1P30793 250 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 MSMO1Q15800 293 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 SAXO1Q8IYX7 474 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 ATOH7Q8N100 152 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 R3HDM4Q96D70 268 aa7.41□□□□□ -1.22
THBS3-201ENST00000368378 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.41□□□□□ -1.22
THBS3-201ENST00000368378 SPG11Q96JI7 2443 aa7.4□□□□□ -1.22
THBS3-201ENST00000368378 LRRC30A6NM36 301 aa7.4□□□□□ -1.22
THBS3-201ENST00000368378 A8MWP6 167 aa7.4□□□□□ -1.22
THBS3-201ENST00000368378 F2Z2F3 143 aa7.4□□□□□ -1.22
THBS3-201ENST00000368378 MLNRO43193 412 aa7.4□□□□□ -1.22
THBS3-201ENST00000368378 CLDN14O95500 239 aa7.4□□□□□ -1.22
THBS3-201ENST00000368378 SP1P08047 785 aa7.4□□□□□ -1.22
THBS3-201ENST00000368378 IGHV1-2P23083 117 aa7.4□□□□□ -1.22
THBS3-201ENST00000368378 ZNF90Q03938 601 aa7.4□□□□□ -1.22
THBS3-201ENST00000368378 ARSJQ5FYB0 599 aaPredicted RBP7.4□□□□□ -1.22
THBS3-201ENST00000368378 Q6ZS49 121 aa7.4□□□□□ -1.22
THBS3-201ENST00000368378 SNIP1Q8TAD8 396 aaKnown RBP7.4□□□□□ -1.22
THBS3-201ENST00000368378 ZCCHC14Q8WYQ9 949 aaKnown RBP7.4□□□□□ -1.22
THBS3-201ENST00000368378 NDUFAF3Q9BU61 184 aa7.4□□□□□ -1.22
THBS3-201ENST00000368378 LINC00470Q9BZP3 86 aa7.4□□□□□ -1.22
THBS3-201ENST00000368378 ZDHHC11Q9H8X9 412 aa7.4□□□□□ -1.22
THBS3-201ENST00000368378 TNRC6AQ8NDV7 1962 aaKnown RBP7.4□□□□□ -1.23
THBS3-201ENST00000368378 A0A1B0GW64 132 aa7.4□□□□□ -1.23
THBS3-201ENST00000368378 DUXBA0A1W2PPF3 345 aa7.4□□□□□ -1.23
THBS3-201ENST00000368378 OR5B21A6NL26 309 aa7.4□□□□□ -1.23
THBS3-201ENST00000368378 H3BTX0 84 aa7.4□□□□□ -1.23
THBS3-201ENST00000368378 CLEC3BP05452 202 aa7.4□□□□□ -1.23
THBS3-201ENST00000368378 CD59P13987 128 aa7.4□□□□□ -1.23
THBS3-201ENST00000368378 CATR1Q13166 79 aa7.4□□□□□ -1.23
THBS3-201ENST00000368378 ZNF766Q5HY98 468 aa7.4□□□□□ -1.23
THBS3-201ENST00000368378 PRR27Q6MZM9 219 aa7.4□□□□□ -1.23
THBS3-201ENST00000368378 SAMD10Q9BYL1 202 aa7.4□□□□□ -1.23
THBS3-201ENST00000368378 SMDT1Q9H4I9 107 aa7.4□□□□□ -1.23
THBS3-201ENST00000368378 PITPNC1Q9UKF7 332 aa7.4□□□□□ -1.23
THBS3-201ENST00000368378 POLDIP2Q9Y2S7 368 aa7.4□□□□□ -1.23
THBS3-201ENST00000368378 MRPS18CQ9Y3D5 142 aaKnown RBP7.4□□□□□ -1.23
THBS3-201ENST00000368378 MPC1Q9Y5U8 109 aa7.4□□□□□ -1.23
THBS3-201ENST00000368378 TNRC6BQ9UPQ9 1833 aaKnown RBP7.4□□□□□ -1.23
THBS3-201ENST00000368378 TMEM30CPA0ZSE6 113 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 RBFOX2O43251 390 aaKnown RBP eCLIP7.39□□□□□ -1.23
THBS3-201ENST00000368378 KBTBD11O94819 623 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 NTF3P20783 257 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 IER3P46695 156 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 DLX1P56177 255 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 MRPL54Q6P161 138 aaKnown RBP7.39□□□□□ -1.23
THBS3-201ENST00000368378 ZNF497Q6ZNH5 498 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 DOLPP1Q86YN1 238 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 TGIF2LYQ8IUE0 185 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 LYG1Q8N1E2 194 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 OR4P4Q8NGL7 312 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 VN1R17PQ8TDU5 208 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 NEIL1Q96FI4 390 aaPredicted RBP7.39□□□□□ -1.23
THBS3-201ENST00000368378 ZNF479Q96JC4 524 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 MDFIC2A0A1B0GVS7 189 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 KLRC4-KLRK1H3BQV0 150 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 OR7C2O60412 319 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 PMCHP20382 165 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 KITLGP21583 273 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 IL3RAP26951 378 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 CD1BP29016 333 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 CEACAM8P31997 349 aaPredicted RBP7.39□□□□□ -1.23
THBS3-201ENST00000368378 KRTDAPP60985 99 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 GNB1P62873 340 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 PAX5Q02548 391 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 NRN1LQ496H8 165 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 BAGE3Q86Y29 109 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 BAGE2Q86Y30 109 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 COQ2Q96H96 371 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 TMEM140Q9NV12 185 aa7.39□□□□□ -1.23
THBS3-201ENST00000368378 CTXND1A0A1B0GTU2 59 aa7.38□□□□□ -1.23
THBS3-201ENST00000368378 BRWD1-AS2P59051 145 aa7.38□□□□□ -1.23
THBS3-201ENST00000368378 HLA-DRB5Q30154 266 aa7.38□□□□□ -1.23
THBS3-201ENST00000368378 ERASQ7Z444 233 aa7.38□□□□□ -1.23
THBS3-201ENST00000368378 MOGAT3Q86VF5 341 aa7.38□□□□□ -1.23
THBS3-201ENST00000368378 TMEM183AQ8IXX5 376 aa7.38□□□□□ -1.23
THBS3-201ENST00000368378 LOXL4Q96JB6 756 aa7.38□□□□□ -1.23
THBS3-201ENST00000368378 MS4A10Q96PG2 267 aa7.38□□□□□ -1.23
THBS3-201ENST00000368378 TMEM147Q9BVK8 224 aa7.38□□□□□ -1.23
THBS3-201ENST00000368378 SSBP3Q9BWW4 388 aaPredicted RBP7.38□□□□□ -1.23
THBS3-201ENST00000368378 A0A087WWC5 75 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms