RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 A0A0U1RQK1 487 aa12.78□□□□□ -0.36
LMNA-203ENST00000368297 SRRM4A7MD48 611 aaKnown RBP12.78□□□□□ -0.36
LMNA-203ENST00000368297 VENTXO95231 258 aa12.78□□□□□ -0.36
LMNA-203ENST00000368297 LY86O95711 162 aa12.78□□□□□ -0.36
LMNA-203ENST00000368297 IGKV1D-33P01593 117 aa12.78□□□□□ -0.36
LMNA-203ENST00000368297 IGKV1-33P01594 117 aa12.78□□□□□ -0.36
LMNA-203ENST00000368297 CD24P25063 80 aa12.78□□□□□ -0.36
LMNA-203ENST00000368297 BRS3P32247 399 aa12.78□□□□□ -0.36
LMNA-203ENST00000368297 PAX9P55771 341 aa12.78□□□□□ -0.36
LMNA-203ENST00000368297 UBE2KP61086 200 aa12.78□□□□□ -0.36
LMNA-203ENST00000368297 POU2AF1Q16633 256 aa12.78□□□□□ -0.36
LMNA-203ENST00000368297 OR4A47Q6IF82 309 aa12.78□□□□□ -0.36
LMNA-203ENST00000368297 CLEC9AQ6UXN8 241 aa12.78□□□□□ -0.36
LMNA-203ENST00000368297 OR4A16Q8NH70 328 aa12.78□□□□□ -0.36
LMNA-203ENST00000368297 ARV1Q9H2C2 271 aa12.78□□□□□ -0.36
LMNA-203ENST00000368297 ITPR3Q14573 2671 aa12.78□□□□□ -0.36
LMNA-203ENST00000368297 TMEM50AO95807 157 aa12.77□□□□□ -0.36
LMNA-203ENST00000368297 SNRNP70P08621 437 aaKnown RBP12.77□□□□□ -0.36
LMNA-203ENST00000368297 OR9G9P0C7N8 305 aa12.77□□□□□ -0.36
LMNA-203ENST00000368297 SAA1P0DJI8 122 aaPredicted RBP12.77□□□□□ -0.36
LMNA-203ENST00000368297 LGALS7P47929 136 aa12.77□□□□□ -0.36
LMNA-203ENST00000368297 SULT1A1P50225 295 aa12.77□□□□□ -0.36
LMNA-203ENST00000368297 HABP2Q14520 560 aaPredicted RBP12.77□□□□□ -0.36
LMNA-203ENST00000368297 HNF4GQ14541 408 aa12.77□□□□□ -0.36
LMNA-203ENST00000368297 VMA21Q3ZAQ7 101 aa12.77□□□□□ -0.36
LMNA-203ENST00000368297 OR1S2Q8NGQ3 325 aa12.77□□□□□ -0.36
LMNA-203ENST00000368297 NANPQ8TBE9 248 aa12.77□□□□□ -0.36
LMNA-203ENST00000368297 RITA1Q96K30 269 aa12.77□□□□□ -0.36
LMNA-203ENST00000368297 CXorf58Q96LI9 332 aa12.77□□□□□ -0.36
LMNA-203ENST00000368297 CIB3Q96Q77 187 aaPredicted RBP12.77□□□□□ -0.36
LMNA-203ENST00000368297 TSNAXQ99598 290 aaKnown RBP12.77□□□□□ -0.36
LMNA-203ENST00000368297 GINS3Q9BRX5 216 aa12.77□□□□□ -0.36
LMNA-203ENST00000368297 VPS13CQ709C8 3753 aa12.77□□□□□ -0.36
LMNA-203ENST00000368297 FGF16O43320 207 aa12.77□□□□□ -0.37
LMNA-203ENST00000368297 DFFBO76075 338 aa12.77□□□□□ -0.37
LMNA-203ENST00000368297 MOSP00540 346 aa12.77□□□□□ -0.37
LMNA-203ENST00000368297 OR2B8PP59922 312 aa12.77□□□□□ -0.37
LMNA-203ENST00000368297 OR2T10Q8NGZ9 312 aa12.77□□□□□ -0.37
LMNA-203ENST00000368297 SAT2Q96F10 170 aaPredicted RBP12.77□□□□□ -0.37
LMNA-203ENST00000368297 BSCL2Q96G97 398 aaPredicted RBP12.77□□□□□ -0.37
LMNA-203ENST00000368297 RBKSQ9H477 322 aa12.77□□□□□ -0.37
LMNA-203ENST00000368297 WFDC1Q9HC57 220 aa12.77□□□□□ -0.37
LMNA-203ENST00000368297 TRAV3A0A0B4J244 114 aa12.76□□□□□ -0.37
LMNA-203ENST00000368297 SLC25A17O43808 307 aa12.76□□□□□ -0.37
LMNA-203ENST00000368297 CST7O76096 145 aa12.76□□□□□ -0.37
LMNA-203ENST00000368297 SEC11BP0C7V7 166 aa12.76□□□□□ -0.37
LMNA-203ENST00000368297 IAPPP10997 89 aa12.76□□□□□ -0.37
LMNA-203ENST00000368297 HBG1P69891 147 aa12.76□□□□□ -0.37
LMNA-203ENST00000368297 HBG2P69892 147 aa12.76□□□□□ -0.37
LMNA-203ENST00000368297 OR5C1Q8NGR4 320 aa12.76□□□□□ -0.37
LMNA-203ENST00000368297 VSTM2AQ8TAG5 236 aa12.76□□□□□ -0.37
LMNA-203ENST00000368297 EAF1Q96JC9 268 aaPredicted RBP12.76□□□□□ -0.37
LMNA-203ENST00000368297 CLCC1Q96S66 551 aa12.76□□□□□ -0.37
LMNA-203ENST00000368297 NUP50Q9UKX7 468 aa12.76□□□□□ -0.37
LMNA-203ENST00000368297 SOX21Q9Y651 276 aaPredicted RBP12.76□□□□□ -0.37
LMNA-203ENST00000368297 CD5LO43866 347 aa12.75□□□□□ -0.37
LMNA-203ENST00000368297 FBXO24O75426 580 aa12.75□□□□□ -0.37
LMNA-203ENST00000368297 IGLV2-23P01705 113 aa12.75□□□□□ -0.37
LMNA-203ENST00000368297 FBP1P09467 338 aa12.75□□□□□ -0.37
LMNA-203ENST00000368297 FAM106CPP0CH98 169 aa12.75□□□□□ -0.37
LMNA-203ENST00000368297 CNTFRP26992 372 aa12.75□□□□□ -0.37
LMNA-203ENST00000368297 DYNLT3P51808 116 aa12.75□□□□□ -0.37
LMNA-203ENST00000368297 BPIFB3P59826 476 aa12.75□□□□□ -0.37
LMNA-203ENST00000368297 RELBQ01201 579 aa12.75□□□□□ -0.37
LMNA-203ENST00000368297 CLINT1Q14677 625 aa12.75□□□□□ -0.37
LMNA-203ENST00000368297 FAM120AOSQ5T036 256 aa12.75□□□□□ -0.37
LMNA-203ENST00000368297 PUSL1Q8N0Z8 303 aaKnown RBP12.75□□□□□ -0.37
LMNA-203ENST00000368297 RNF5Q99942 180 aa12.75□□□□□ -0.37
LMNA-203ENST00000368297 QTRT1Q9BXR0 403 aaKnown RBP12.75□□□□□ -0.37
LMNA-203ENST00000368297 BET1LQ9NYM9 111 aa12.75□□□□□ -0.37
LMNA-203ENST00000368297 CREBBPQ92793 2442 aa12.74□□□□□ -0.37
LMNA-203ENST00000368297 ZNF705EA8MWA4 302 aaPredicted RBP12.74□□□□□ -0.37
LMNA-203ENST00000368297 NUDT19A8MXV4 375 aa12.74□□□□□ -0.37
LMNA-203ENST00000368297 UPK2O00526 184 aa12.74□□□□□ -0.37
LMNA-203ENST00000368297 KBTBD11O94819 623 aa12.74□□□□□ -0.37
LMNA-203ENST00000368297 SCAF4O95104 1147 aaKnown RBP12.74□□□□□ -0.37
LMNA-203ENST00000368297 TMEM11P17152 192 aa12.74□□□□□ -0.37
LMNA-203ENST00000368297 SULT1A2P50226 295 aa12.74□□□□□ -0.37
LMNA-203ENST00000368297 BLOC1S1P78537 153 aa12.74□□□□□ -0.37
LMNA-203ENST00000368297 PSG5Q15238 335 aa12.74□□□□□ -0.37
LMNA-203ENST00000368297 AANATQ16613 207 aa12.74□□□□□ -0.37
LMNA-203ENST00000368297 SPANXN5Q5MJ07 72 aa12.74□□□□□ -0.37
LMNA-203ENST00000368297 TMEM217Q8N7C4 229 aa12.74□□□□□ -0.37
LMNA-203ENST00000368297 ATP5SQ99766 215 aa12.74□□□□□ -0.37
LMNA-203ENST00000368297 YAE1D1Q9NRH1 226 aa12.74□□□□□ -0.37
LMNA-203ENST00000368297 MFSD2BA6NFX1 497 aa12.73□□□□□ -0.37
LMNA-203ENST00000368297 CEBPZOSA8MTT3 80 aa12.73□□□□□ -0.37
LMNA-203ENST00000368297 H3BP45 60 aa12.73□□□□□ -0.37
LMNA-203ENST00000368297 FSHBP01225 129 aa12.73□□□□□ -0.37
LMNA-203ENST00000368297 IFNA5P01569 189 aa12.73□□□□□ -0.37
LMNA-203ENST00000368297 FAM157CP0CG43 387 aa12.73□□□□□ -0.37
LMNA-203ENST00000368297 SPP1P10451 314 aa12.73□□□□□ -0.37
LMNA-203ENST00000368297 RAB5CP51148 216 aa12.73□□□□□ -0.37
LMNA-203ENST00000368297 PLGLAQ15195 96 aa12.73□□□□□ -0.37
LMNA-203ENST00000368297 MMDQ15546 238 aa12.73□□□□□ -0.37
LMNA-203ENST00000368297 AARDQ4LEZ3 155 aa12.73□□□□□ -0.37
LMNA-203ENST00000368297 HSD17B13Q7Z5P4 300 aaPredicted RBP12.73□□□□□ -0.37
LMNA-203ENST00000368297 TEX29Q8N6K0 151 aa12.73□□□□□ -0.37
LMNA-203ENST00000368297 TEX45Q8NA69 505 aa12.73□□□□□ -0.37
LMNA-203ENST00000368297 OR52E5Q8NH55 327 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms