RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 A0A087X0M5 115 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 A0A1B0GX30 115 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 FBLL1A6NHQ2 334 aaKnown RBP10.88□□□□□ -0.67
PTPRK-207ENST00000368226 NPIPB9F8W1W9 429 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 HTN3P15516 51 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 OR4A47Q6IF82 309 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 OR11H4Q8NGC9 324 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 SMIM12Q96EX1 92 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 C17orf100A8MU93 164 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 ICAM4Q14773 271 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 GPR82Q96P67 336 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 DPM3Q9P2X0 92 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 GREB1LQ9C091 1923 aaPredicted RBP10.88□□□□□ -0.67
PTPRK-207ENST00000368226 EFEMP2O95967 443 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 IGFBP2P18065 325 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 SNRPD3P62318 126 aaKnown RBP10.88□□□□□ -0.67
PTPRK-207ENST00000368226 CD69Q07108 199 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 HSPB9Q9BQS6 159 aa10.88□□□□□ -0.67
PTPRK-207ENST00000368226 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.87□□□□□ -0.67
PTPRK-207ENST00000368226 LOC390937A0A1W2PQ73 354 aa10.87□□□□□ -0.67
PTPRK-207ENST00000368226 PSMB11A5LHX3 300 aa10.87□□□□□ -0.67
PTPRK-207ENST00000368226 PPP1R27Q86WC6 154 aa10.87□□□□□ -0.67
PTPRK-207ENST00000368226 PLPPR1Q8TBJ4 325 aa10.87□□□□□ -0.67
PTPRK-207ENST00000368226 TEX29Q8N6K0 151 aa10.87□□□□□ -0.67
PTPRK-207ENST00000368226 FGFBP3Q8TAT2 258 aa10.87□□□□□ -0.67
PTPRK-207ENST00000368226 C1QTNF5Q9BXJ0 243 aa10.87□□□□□ -0.67
PTPRK-207ENST00000368226 NPDC1Q9NQX5 325 aaPredicted RBP10.87□□□□□ -0.67
PTPRK-207ENST00000368226 LINC00862A6NCI5 91 aa10.87□□□□□ -0.67
PTPRK-207ENST00000368226 RND3P61587 244 aa10.87□□□□□ -0.67
PTPRK-207ENST00000368226 POC1AQ8NBT0 407 aa10.87□□□□□ -0.67
PTPRK-207ENST00000368226 MPTX1A8MV57 137 aa10.87□□□□□ -0.67
PTPRK-207ENST00000368226 IFT22Q9H7X7 185 aa10.87□□□□□ -0.67
PTPRK-207ENST00000368226 IL6RP08887 468 aaPredicted RBP10.87□□□□□ -0.67
PTPRK-207ENST00000368226 COX19Q49B96 90 aa10.87□□□□□ -0.67
PTPRK-207ENST00000368226 NEU4Q8WWR8 484 aaPredicted RBP10.87□□□□□ -0.67
PTPRK-207ENST00000368226 A0A0G2JK05 382 aa10.86□□□□□ -0.67
PTPRK-207ENST00000368226 CIDEAO60543 219 aa10.86□□□□□ -0.67
PTPRK-207ENST00000368226 COMPP49747 757 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-207ENST00000368226 FOXG1P55316 489 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-207ENST00000368226 CRIPAKQ8N1N5 446 aa10.86□□□□□ -0.67
PTPRK-207ENST00000368226 MRPL18Q9H0U6 180 aaKnown RBP10.86□□□□□ -0.67
PTPRK-207ENST00000368226 GP6Q9HCN6 339 aa10.86□□□□□ -0.67
PTPRK-207ENST00000368226 LINC00527Q9UJ94 153 aa10.86□□□□□ -0.67
PTPRK-207ENST00000368226 NMBP08949 121 aa10.86□□□□□ -0.67
PTPRK-207ENST00000368226 COLCA1Q6ZS62 124 aa10.86□□□□□ -0.67
PTPRK-207ENST00000368226 CYP2G1PQ6ZSU1 146 aa10.86□□□□□ -0.67
PTPRK-207ENST00000368226 GLMPQ8WWB7 406 aa10.86□□□□□ -0.67
PTPRK-207ENST00000368226 AHCTF1Q8WYP5 2266 aa10.86□□□□□ -0.67
PTPRK-207ENST00000368226 KBTBD11-OT1A0A1B0GTJ5 212 aa10.86□□□□□ -0.67
PTPRK-207ENST00000368226 ARPC1AQ92747 370 aa10.86□□□□□ -0.67
PTPRK-207ENST00000368226 NPIPB6E9PJ23 425 aa10.86□□□□□ -0.67
PTPRK-207ENST00000368226 ZFP36L1Q07352 338 aaKnown RBP10.86□□□□□ -0.67
PTPRK-207ENST00000368226 LYZL4Q96KX0 146 aa10.86□□□□□ -0.67
PTPRK-207ENST00000368226 FAM159AQ6UWV7 190 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 LHFPL4Q7Z7J7 247 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 RNASE6Q93091 150 aaKnown RBP10.85□□□□□ -0.67
PTPRK-207ENST00000368226 ZFP30Q9Y2G7 519 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 IGHV1-18A0A0C4DH31 117 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 GRIFINA4D1Z8 144 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 M0R381 172 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 RPS11P62280 158 aaKnown RBP eCLIP10.85□□□□□ -0.67
PTPRK-207ENST00000368226 SMIM8Q96KF7 97 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 AQP10Q96PS8 301 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 SEMA5BQ9P283 1151 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 TBR1Q16650 682 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 MARVELD3Q96A59 401 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 NYNRINQ9P2P1 1898 aaKnown RBP10.85□□□□□ -0.67
PTPRK-207ENST00000368226 LCTP09848 1927 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 MSGN1A6NI15 193 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 SIAH2O43255 324 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 CGAP01215 116 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 WFDC12Q8WWY7 111 aa10.85□□□□□ -0.67
PTPRK-207ENST00000368226 FAM90A26D6RGX4 464 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 GCHFRP30047 84 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 PUSL1Q8N0Z8 303 aaKnown RBP10.84□□□□□ -0.67
PTPRK-207ENST00000368226 ATOH7Q8N100 152 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 F11RQ9Y624 299 aaKnown RBP10.84□□□□□ -0.67
PTPRK-207ENST00000368226 ZDBF2Q9HCK1 2354 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 NPIPB13A6NJU9 1138 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 NPIPB4C9JG80 1138 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 M0R143 59 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 ZP1P60852 638 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 SAA2-SAA4A0A096LPE2 208 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 IQCF6A8MYZ5 107 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 RBFOX2O43251 390 aaKnown RBP eCLIP10.84□□□□□ -0.671e-6■■■■■ 27.3
PTPRK-207ENST00000368226 SAA2P0DJI9 122 aaPredicted RBP10.84□□□□□ -0.67
PTPRK-207ENST00000368226 KIR3DL3Q8N743 410 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 C1orf162Q8NEQ5 155 aaPredicted RBP10.84□□□□□ -0.67
PTPRK-207ENST00000368226 RAB37Q96AX2 223 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 PARLQ9H300 379 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 GNLYP22749 145 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 SRIP30626 198 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 FAM209AQ5JX71 171 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 LINC00114Q6XXX2 140 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 COL4A6Q14031 1691 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 C7orf71A4D174 169 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 CENPWQ5EE01 88 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 GREB1Q4ZG55 1949 aa10.84□□□□□ -0.67
PTPRK-207ENST00000368226 CSRP1P21291 193 aaKnown RBP10.83□□□□□ -0.68
PTPRK-207ENST00000368226 NSUN5P1Q3KNT7 163 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms