RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 FREM2Q5SZK8 3169 aa11.76□□□□□ -0.53
CD48-201ENST00000368045 TM4SF5O14894 197 aa11.76□□□□□ -0.53
CD48-201ENST00000368045 RD3LP0DJH9 198 aa11.76□□□□□ -0.53
CD48-201ENST00000368045 PAX1P15863 534 aa11.76□□□□□ -0.53
CD48-201ENST00000368045 GCHFRP30047 84 aa11.76□□□□□ -0.53
CD48-201ENST00000368045 RPL15P61313 204 aaKnown RBP11.76□□□□□ -0.53
CD48-201ENST00000368045 FAM78BQ5VT40 261 aa11.76□□□□□ -0.53
CD48-201ENST00000368045 STUMQ69YW2 141 aa11.76□□□□□ -0.53
CD48-201ENST00000368045 ZNF474Q6S9Z5 364 aaPredicted RBP11.76□□□□□ -0.53
CD48-201ENST00000368045 ZNF439Q8NDP4 499 aa11.76□□□□□ -0.53
CD48-201ENST00000368045 TMEM18Q96B42 140 aa11.76□□□□□ -0.53
CD48-201ENST00000368045 C1orf159Q96HA4 380 aa11.76□□□□□ -0.53
CD48-201ENST00000368045 IDI2-AS1Q9NZ38 188 aa11.76□□□□□ -0.53
CD48-201ENST00000368045 IL19Q9UHD0 177 aa11.76□□□□□ -0.53
CD48-201ENST00000368045 SPAARA0A1B0GVQ0 90 aa11.75□□□□□ -0.53
CD48-201ENST00000368045 MKRN2OSH3BPM6 223 aa11.75□□□□□ -0.53
CD48-201ENST00000368045 CNN1P51911 297 aaKnown RBP11.75□□□□□ -0.53
CD48-201ENST00000368045 ARSJQ5FYB0 599 aaPredicted RBP11.75□□□□□ -0.53
CD48-201ENST00000368045 C1orf185Q5T7R7 199 aa11.75□□□□□ -0.53
CD48-201ENST00000368045 OR5T1Q8NG75 326 aa11.75□□□□□ -0.53
CD48-201ENST00000368045 TMEM37Q8WXS4 190 aa11.75□□□□□ -0.53
CD48-201ENST00000368045 UHRF2Q96PU4 802 aa11.75□□□□□ -0.53
CD48-201ENST00000368045 SLC25A10Q9UBX3 287 aaPredicted RBP11.75□□□□□ -0.53
CD48-201ENST00000368045 PCNX2A6NKB5 2137 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 CA2P00918 260 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 C1QTNF9P0C862 333 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 GZMBP10144 247 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 AREGP15514 252 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 TNFSF4P23510 183 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 DDTP30046 118 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 TIMP3P35625 211 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 GPX4P36969 197 aaPredicted RBP11.74□□□□□ -0.53
CD48-201ENST00000368045 PRR20EP86478 221 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 PRR20CP86479 221 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 PRR20DP86480 221 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 PRR20BP86481 221 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 PRR20AP86496 221 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 EFNB3Q15768 340 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 SPRNQ5BIV9 151 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 C1orf229Q6ZS94 237 aaPredicted RBP11.74□□□□□ -0.53
CD48-201ENST00000368045 REC114Q7Z4M0 266 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 STPG3Q8N7X2 389 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 NEUROG1Q92886 237 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 DERL1Q9BUN8 251 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 OR51B2Q9Y5P1 312 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 A0A0U1RQK1 487 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 SCO2A0A1W2PP80 73 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 ZNF320A2RRD8 509 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 C9JCJ5 164 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 TNFAIP6P98066 277 aaPredicted RBP11.74□□□□□ -0.53
CD48-201ENST00000368045 CLEC12BQ2HXU8 276 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 LINC00469Q8N7U9 141 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 SSMEM1Q8WWF3 244 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 NOL4LQ96MY1 436 aaPredicted RBP11.74□□□□□ -0.53
CD48-201ENST00000368045 GAFA1Q96PS6 74 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 TRAPPC1Q9Y5R8 145 aa11.74□□□□□ -0.53
CD48-201ENST00000368045 CACNA1DQ01668 2161 aa11.73□□□□□ -0.53
CD48-201ENST00000368045 TRBV20OR9-2A0A075B6H5 130 aa11.73□□□□□ -0.53
CD48-201ENST00000368045 IGHV3-7P01780 117 aa11.73□□□□□ -0.53
CD48-201ENST00000368045 YPEL3P61236 119 aaPredicted RBP11.73□□□□□ -0.53
CD48-201ENST00000368045 PRCDQ00LT1 54 aa11.73□□□□□ -0.53
CD48-201ENST00000368045 SSX2Q16385 188 aa11.73□□□□□ -0.53
CD48-201ENST00000368045 RTL8BQ17RB0 113 aa11.73□□□□□ -0.53
CD48-201ENST00000368045 ZNF788Q6ZQV5 615 aa11.73□□□□□ -0.53
CD48-201ENST00000368045 LYG1Q8N1E2 194 aa11.73□□□□□ -0.53
CD48-201ENST00000368045 ZNF114Q8NC26 417 aa11.73□□□□□ -0.53
CD48-201ENST00000368045 OR10G8Q8NGN5 311 aa11.73□□□□□ -0.53
CD48-201ENST00000368045 SLC35E1Q96K37 410 aa11.73□□□□□ -0.53
CD48-201ENST00000368045 GCM1Q9NP62 436 aa11.73□□□□□ -0.53
CD48-201ENST00000368045 FKBP11Q9NYL4 201 aa11.73□□□□□ -0.53
CD48-201ENST00000368045 ELOVL5Q9NYP7 299 aa11.73□□□□□ -0.53
CD48-201ENST00000368045 RPUSD1Q9UJJ7 312 aaKnown RBP11.73□□□□□ -0.53
CD48-201ENST00000368045 YTHDF2Q9Y5A9 579 aaKnown RBP11.73□□□□□ -0.53
CD48-201ENST00000368045 FAM215AQ9Y5M1 114 aa11.73□□□□□ -0.53
CD48-201ENST00000368045 UPK2O00526 184 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 IGHV1-46P01743 117 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 SELLP14151 372 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 BMP5P22003 454 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 TEX38Q6PEX7 206 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 SLC25A48Q6ZT89 311 aaKnown RBP11.72□□□□□ -0.53
CD48-201ENST00000368045 PNKDQ8N490 385 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 GBGT1Q8N5D6 347 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 SGMS2Q8NHU3 365 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 ZCCHC14Q8WYQ9 949 aaKnown RBP11.72□□□□□ -0.53
CD48-201ENST00000368045 LEAP2Q969E1 77 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 C14orf144Q96I85 54 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 C19orf24Q9BVV8 132 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 PLEKHA3Q9HB20 300 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 TMEM167BQ9NRX6 74 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 SLC45A2Q9UMX9 530 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 TP53TG5Q9Y2B4 290 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 A8MXE2 369 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 TEX36Q5VZQ5 186 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 VHLLQ6RSH7 139 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 TCF23Q7RTU1 214 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 PARD6AQ9NPB6 346 aa11.72□□□□□ -0.53
CD48-201ENST00000368045 A0A087X0M5 115 aa11.71□□□□□ -0.54
CD48-201ENST00000368045 A0A1B0GX30 115 aa11.71□□□□□ -0.54
CD48-201ENST00000368045 hADV38S2A0JD32 116 aa11.71□□□□□ -0.54
CD48-201ENST00000368045 J3QR06 171 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms