RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 SPSB3Q6PJ21 355 aa6.11□□□□□ -1.43
VTA1-202ENST00000367630 ATRAIDQ6UW56 229 aa6.11□□□□□ -1.43
VTA1-202ENST00000367630 TMEM167AQ8TBQ9 72 aa6.11□□□□□ -1.43
VTA1-202ENST00000367630 HTR1DP28221 377 aa6.11□□□□□ -1.43
VTA1-202ENST00000367630 CLEC7AQ9BXN2 247 aa6.11□□□□□ -1.43
VTA1-202ENST00000367630 PPBPP02775 128 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 FAM87AP0C7U9 286 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 STARD4Q96DR4 205 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 LY6G6EA0A0G2JKS1 128 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 SLC25A17O43808 307 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 SPRED2Q7Z698 418 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 PYGO2Q9BRQ0 406 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 LPAR2Q9HBW0 351 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 ZNF835Q9Y2P0 537 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 U3KQA8 63 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 GLI4P10075 376 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 MYF5P13349 255 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 ADCYAP1P18509 176 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 PSG7Q13046 419 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 TMEM177Q53S58 311 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 OR4A47Q6IF82 309 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 HIF1ANQ9NWT6 349 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 IL36RNQ9UBH0 155 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 TCRBV4S1A1TA0A5B7 111 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 HIST1H2BKO60814 126 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 HIST1H2BJP06899 126 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 HIST1H2BOP23527 126 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 HIST1H2BBP33778 126 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 HIST1H2BDP58876 126 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 HIST1H2BCP62807 126 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 HIST2H2BEQ16778 126 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.1□□□□□ -1.43
VTA1-202ENST00000367630 HIST1H2BHQ93079 126 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 HIST1H2BNQ99877 126 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 HIST1H2BMQ99879 126 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 A0A1W2PS18 150 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 CECR9P0C854 216 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 MFAP4P55083 255 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 TLE1Q04724 770 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 CD69Q07108 199 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 MRPL54Q6P161 138 aaKnown RBP6.1□□□□□ -1.43
VTA1-202ENST00000367630 VHLLQ6RSH7 139 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 MOB3BQ86TA1 216 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 COPS9Q8WXC6 57 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 SMPXQ9UHP9 88 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 PLXND1Q9Y4D7 1925 aa6.1□□□□□ -1.43
VTA1-202ENST00000367630 IGKV1D-13A0A0B4J2D9 117 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 CELA2AP08217 269 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 IGKV1-13P0DP09 117 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 SCGB2A2Q13296 93 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 ZNF738Q8NE65 137 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 MEX3AA1L020 520 aaKnown RBP6.09□□□□□ -1.43
VTA1-202ENST00000367630 SHISA7A6NL88 538 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 BMPR1BO00238 502 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 FSTL3O95633 263 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 APOBEC3AP31941 199 aaPredicted RBP6.09□□□□□ -1.43
VTA1-202ENST00000367630 TCTAP57738 103 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 HERVK_113P61574 105 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 INSIG2Q9Y5U4 225 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 PTPRSQ13332 1948 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 YPEL3P61236 119 aaPredicted RBP6.09□□□□□ -1.43
VTA1-202ENST00000367630 TBR1Q16650 682 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 SPATA31B1PQ5VZV4 182 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 PEX7O00628 323 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 IGLV1-44P01699 117 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 RFPL3SP0C7P2 107 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 FTH1P19P0C7X4 201 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 WNT5AP41221 380 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 RELQ04864 619 aaPredicted RBP6.09□□□□□ -1.43
VTA1-202ENST00000367630 FAM90A2PQ658T7 463 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 WIPF2Q8TF74 440 aaPredicted RBP6.09□□□□□ -1.43
VTA1-202ENST00000367630 SNRNP40Q96DI7 357 aaKnown RBP6.09□□□□□ -1.43
VTA1-202ENST00000367630 ASCL3Q9NQ33 180 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 RPUSD1Q9UJJ7 312 aaKnown RBP6.09□□□□□ -1.43
VTA1-202ENST00000367630 RALYQ9UKM9 306 aaKnown RBP6.09□□□□□ -1.43
VTA1-202ENST00000367630 KLK2P20151 261 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 C1orf194Q5T5A4 169 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 ITLN1Q8WWA0 313 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 TBX15Q96SF7 602 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 C11orf1Q9H5F2 150 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 ST20Q9HBF5 79 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 PROK2Q9HC23 129 aa6.09□□□□□ -1.43
VTA1-202ENST00000367630 IGKV1D-8A0A087WSZ0 117 aa6.09□□□□□ -1.44
VTA1-202ENST00000367630 SAA2-SAA4A0A096LPE2 208 aa6.09□□□□□ -1.44
VTA1-202ENST00000367630 COL8A1P27658 744 aa6.09□□□□□ -1.44
VTA1-202ENST00000367630 COTL1Q14019 142 aa6.09□□□□□ -1.44
VTA1-202ENST00000367630 OR1B1Q8NGR6 318 aa6.09□□□□□ -1.44
VTA1-202ENST00000367630 OR10AG1Q8NH19 301 aa6.09□□□□□ -1.44
VTA1-202ENST00000367630 EAF1Q96JC9 268 aaPredicted RBP6.09□□□□□ -1.44
VTA1-202ENST00000367630 SLC50A1Q9BRV3 221 aa6.09□□□□□ -1.44
VTA1-202ENST00000367630 RPP21Q9H633 154 aaKnown RBP6.09□□□□□ -1.44
VTA1-202ENST00000367630 M0QZ24 198 aa6.08□□□□□ -1.44
VTA1-202ENST00000367630 CA2P00918 260 aa6.08□□□□□ -1.44
VTA1-202ENST00000367630 LINC00614P0C842 121 aa6.08□□□□□ -1.44
VTA1-202ENST00000367630 CCL2P13500 99 aa6.08□□□□□ -1.44
VTA1-202ENST00000367630 PDE6HQ13956 83 aa6.08□□□□□ -1.44
VTA1-202ENST00000367630 MTURNQ8N3F0 131 aa6.08□□□□□ -1.44
VTA1-202ENST00000367630 TNFSF13O75888 250 aa6.08□□□□□ -1.44
VTA1-202ENST00000367630 IER3P46695 156 aa6.08□□□□□ -1.44
VTA1-202ENST00000367630 PDLIM4P50479 330 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms