RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 C1QTNF12Q5T7M4 302 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 SEMA5BQ9P283 1151 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 DEFB124Q8NES8 71 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 TUBA4BQ9H853 241 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 APOHP02749 345 aaPredicted RBP10.67□□□□□ -0.7
TPR-201ENST00000367478 RIPPLY2Q5TAB7 128 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 FAM57AQ8TBR7 257 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 NPDC1Q9NQX5 325 aaPredicted RBP10.67□□□□□ -0.7
TPR-201ENST00000367478 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.67□□□□□ -0.74e-7■■■■□ 22
TPR-201ENST00000367478 IGHV1OR15-9A0A0B4J2B8 117 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 ZNF729A6NN14 1252 aaPredicted RBP10.67□□□□□ -0.7
TPR-201ENST00000367478 SCTP09683 121 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 GPR183P32249 361 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 P2RY4P51582 365 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 WDYHV1Q96HA8 205 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 CYSLTR1Q9Y271 337 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 PRDM13Q9H4Q3 707 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 GVINP1Q7Z2Y8 2422 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 PLAUP00749 431 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 COX6B1P14854 86 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 SEC11AP67812 179 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 PRSS53Q2L4Q9 553 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 CCL13Q99616 98 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 GREB1Q4ZG55 1949 aa10.67□□□□□ -0.7
TPR-201ENST00000367478 PTPRFP10586 1907 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 IFI6P09912 130 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 ATXN8Q156A1 80 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 PPBPP02775 128 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 PF4P02776 101 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 EFNB2P52799 333 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 FAM214BQ7L5A3 538 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 PGFP49763 221 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 SRSF4Q08170 494 aaKnown RBP10.66□□□□□ -0.7
TPR-201ENST00000367478 C14orf144Q96I85 54 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 A8MWV9 139 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 J3QW42 95 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 DXOO77932 396 aaKnown RBP10.66□□□□□ -0.7
TPR-201ENST00000367478 KIAA1644Q3SXP7 199 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 FOXI3A8MTJ6 420 aaPredicted RBP10.66□□□□□ -0.7
TPR-201ENST00000367478 FOXH1O75593 365 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 CCL8P80075 99 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 DCAF12L2Q5VW00 463 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 C18orf15Q96N68 181 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 CYP2G1PQ6ZSU1 146 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 PCNX1Q96RV3 2341 aa10.66□□□□□ -0.7
TPR-201ENST00000367478 C1QL1O75973 258 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 UCN2Q96RP3 112 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 TCF19Q9Y242 345 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 TRBV5-5A0A0J9YX44 114 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 TM4SF5O14894 197 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 C1orf100Q5SVJ3 147 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 CACNA1GO43497 2377 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 HOXA3O43365 443 aaPredicted RBP10.65□□□□□ -0.7
TPR-201ENST00000367478 NBEAP1P0C6P0 100 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 DTX1Q86Y01 620 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 CD8AP01732 235 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 CCL3P10147 92 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 GAGE2BQ13066 116 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 GAGE2EQ4V326 116 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 ZNF562Q6V9R5 426 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.65□□□□□ -0.7
TPR-201ENST00000367478 CACNG8Q8WXS5 425 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 GAGE2DQ9UEU5 116 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 LHX8Q68G74 356 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 SPANXDQ9BXN6 97 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 RPP21Q9H633 154 aaKnown RBP10.65□□□□□ -0.7
TPR-201ENST00000367478 SPEM2Q0P670 501 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 ASCL2Q99929 193 aa10.65□□□□□ -0.7
TPR-201ENST00000367478 COX5BP10606 129 aa10.65□□□□□ -0.71
TPR-201ENST00000367478 MYF5P13349 255 aa10.65□□□□□ -0.71
TPR-201ENST00000367478 TMEM249Q2WGJ8 235 aa10.65□□□□□ -0.71
TPR-201ENST00000367478 CENPVQ7Z7K6 275 aaPredicted RBP10.65□□□□□ -0.71
TPR-201ENST00000367478 RNASEH2CQ8TDP1 164 aaKnown RBP10.65□□□□□ -0.71
TPR-201ENST00000367478 ANK1P16157 1881 aa10.65□□□□□ -0.71
TPR-201ENST00000367478 DPM2O94777 84 aa10.65□□□□□ -0.71
TPR-201ENST00000367478 ZNF585BQ52M93 769 aa10.65□□□□□ -0.71
TPR-201ENST00000367478 ORMDL2Q53FV1 153 aa10.65□□□□□ -0.71
TPR-201ENST00000367478 HLA-DQB1P01920 261 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 WNT10AQ9GZT5 417 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 M0R381 172 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 PMS2CLQ68D20 193 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 MORN3Q6PF18 240 aaPredicted RBP10.64□□□□□ -0.71
TPR-201ENST00000367478 C16orf47Q6ZP98 133 aaPredicted RBP10.64□□□□□ -0.71
TPR-201ENST00000367478 NAPSAO96009 420 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 CISD3P0C7P0 127 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 OR10J3Q5JRS4 329 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 DCAF10Q5QP82 559 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 LOC105371242A0A075B767 164 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 PPIAL4CA0A0B4J2A2 164 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 IZUMO1RA6ND01 250 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 PPIAL4GP0DN37 164 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 C1QL3Q5VWW1 255 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 IGHV5-10-1A0A0J9YXX1 117 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 PSG4Q00888 419 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 SRSF1Q07955 248 aaKnown RBP eCLIP10.64□□□□□ -0.718e-7■■■□□ 18.3
TPR-201ENST00000367478 OR11H4Q8NGC9 324 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 LAMTOR2Q9Y2Q5 125 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 DUX3Q96PT4 197 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 IMMP2LQ96T52 175 aa10.64□□□□□ -0.71
TPR-201ENST00000367478 TOMM7Q9P0U1 55 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms