RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 LOXL3P58215 753 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 TMEM177Q53S58 311 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 TIMM23BQ5SRD1 257 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 C19orf48Q6RUI8 117 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 LRTM2Q8N967 370 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 OR11H1Q8NG94 326 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 OR11H2Q8NH07 326 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 CTHRC1Q96CG8 243 aa7.63□□□□□ -1.19
SYNE1-209ENST00000367257 SIRT4Q9Y6E7 314 aaPredicted RBP7.63□□□□□ -1.19
SYNE1-209ENST00000367257 TMEM229AB2RXF0 380 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 RAMP1O60894 148 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 GZMBP10144 247 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 HIST1H1AQ02539 215 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-209ENST00000367257 FUT5Q11128 374 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 FHL5Q5TD97 284 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 RNASEH2CQ8TDP1 164 aaKnown RBP7.62□□□□□ -1.19
SYNE1-209ENST00000367257 KCNS1Q96KK3 526 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 IL36RNQ9UBH0 155 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 IGHV1-69-2A0A0G2JMI3 117 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 A0A0J9YW62 118 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 GCHFRP30047 84 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 SPINK14Q6IE38 97 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 TTC9CQ8N5M4 171 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 ZNF502Q8TBZ5 544 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 hCG_38984A0A1B0GV85 526 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 SPINK8P0C7L1 97 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 PAX1P15863 534 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 CIARTQ8N365 385 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-209ENST00000367257 OR52M1Q8NGK5 317 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 OR4D5Q8NGN0 318 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 DDB2Q92466 427 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 ST6GALNAC6Q969X2 333 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 CSTL1Q9H114 145 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 C5orf66Q9H5L9 145 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 ST20Q9HBF5 79 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 TCF19Q9Y242 345 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 PHLDA3Q9Y5J5 127 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 F11RQ9Y624 299 aaKnown RBP7.62□□□□□ -1.19
SYNE1-209ENST00000367257 SPTBN5Q9NRC6 3674 aaKnown RBP7.62□□□□□ -1.19
SYNE1-209ENST00000367257 SRP19P09132 144 aaKnown RBP7.62□□□□□ -1.19
SYNE1-209ENST00000367257 PATE4P0C8F1 98 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 PF4V1P10720 104 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 CX3CL1P78423 397 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 SRSF7Q16629 238 aaKnown RBP eCLIP7.62□□□□□ -1.19
SYNE1-209ENST00000367257 TM4SF20Q53R12 229 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 FAM166AQ6J272 317 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 ZNF841Q6ZN19 808 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 ZAR1Q86SH2 424 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 SVIPQ8NHG7 77 aa7.62□□□□□ -1.19
SYNE1-209ENST00000367257 NPIPB11E5RHQ5 1161 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 H3BRM9 83 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 CCL2P13500 99 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 KLRB1Q12918 225 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 ACSF3Q4G176 576 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-209ENST00000367257 ZNF418Q8TF45 676 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-209ENST00000367257 RCC1LQ96I51 464 aaKnown RBP7.61□□□□□ -1.19
SYNE1-209ENST00000367257 FZR1Q9UM11 496 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 TDGF1P13385 188 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 UCP1P25874 307 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 FOXC1Q12948 553 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 TMEM144Q7Z5S9 345 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 SLC25A2Q9BXI2 301 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 IGKV1D-16P01601 117 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 RTP5Q14D33 572 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 PLPPR2Q96GM1 343 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 NRN1Q9NPD7 142 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 RAXQ9Y2V3 346 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 DNAL4O96015 105 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 MGAT2Q10469 447 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 RRN3P1Q2M238 152 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 OR4X2Q8NGF9 303 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 UCN2Q96RP3 112 aa7.61□□□□□ -1.19
SYNE1-209ENST00000367257 KLF4O43474 513 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 ZNF137PP52743 207 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 FADS6Q8N9I5 356 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 NABP2Q9BQ15 211 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 AICDAQ9GZX7 198 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 LHFPL6Q9Y693 200 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 TRAV8-2A0A0B4J237 113 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 KBTBD11-OT1A0A1B0GTJ5 212 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 RNF222A6NCQ9 220 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 CRXO43186 299 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-209ENST00000367257 ARL14EPLP0DKL9 152 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 RUNX1Q01196 453 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 ATP5G2Q06055 141 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 SLAQ13239 276 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 PMS2CLQ68D20 193 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 ZNF414Q96IQ9 312 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 CLEC7AQ9BXN2 247 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 CASP8AP2Q9UKL3 1982 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 CACNA1EQ15878 2313 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 A0A1W2PR80 420 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 J3KRW8 73 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 SERF1AO75920 110 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 SNRPD3P62318 126 aaKnown RBP7.6□□□□□ -1.19
SYNE1-209ENST00000367257 LINC01590Q5TEZ4 76 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 CLDND2Q8NHS1 167 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 SPAG8Q99932 426 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-209ENST00000367257 TMEM242Q9NWH2 141 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 SHROOM3Q8TF72 1996 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms