RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 LPAL2Q16609 132 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 SP5Q6BEB4 398 aaPredicted RBP3.2□□□□□ -1.9
SYNE1-207ENST00000367255 A0A1B0GX51 115 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 NDUFB4O95168 129 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 C16orf47Q6ZP98 133 aaPredicted RBP3.2□□□□□ -1.9
SYNE1-207ENST00000367255 RNF182Q8N6D2 247 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 VN1R2Q8NFZ6 395 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 FAM173AQ9BQD7 235 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 A0A0G2JLM5 398 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 RBAKDNA6NC62 111 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 GGTLC3B5MD39 225 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 DEFA4P12838 97 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 NKG7Q16617 165 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 SH2D6Q7Z4S9 175 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 RNF125Q96EQ8 232 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 ZNF735P0CB33 412 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 RGRP47804 291 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 MRPL43Q8N983 215 aaKnown RBP3.2□□□□□ -1.9
SYNE1-207ENST00000367255 BUB3O43684 328 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 Q56UQ5 140 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 OR11H7Q8NGC8 314 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 TJP1Q07157 1748 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 ZDBF2Q9HCK1 2354 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 NINQ8N4C6 2090 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 TRAV27A0A087WT01 109 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 H3BT86 120 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 RHODO00212 210 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 ENSAO43768 121 aaKnown RBP3.2□□□□□ -1.9
SYNE1-207ENST00000367255 OR4X1Q8NH49 305 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 PAX2Q02962 417 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 RPL18Q07020 188 aaKnown RBP3.2□□□□□ -1.9
SYNE1-207ENST00000367255 ZC2HC1AQ96GY0 325 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 MRPL20Q9BYC9 149 aaKnown RBP3.2□□□□□ -1.9
SYNE1-207ENST00000367255 PLCE1Q9P212 2302 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 TUSC2O75896 110 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 DUTP33316 252 aaKnown RBP3.2□□□□□ -1.9
SYNE1-207ENST00000367255 SIRT6Q8N6T7 355 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 RAE1P78406 368 aaKnown RBP3.2□□□□□ -1.9
SYNE1-207ENST00000367255 PSG5Q15238 335 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 CXCL3P19876 107 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 NDUFB1O75438 58 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 WNT1P04628 370 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 OR5AN1Q8NGI8 311 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 PRR7Q8TB68 274 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 DUX5Q96PT3 197 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 GNB3P16520 340 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 HIGD1AQ9Y241 93 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 AMBPP02760 352 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 SPATA45Q537H7 98 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 C17orf99Q6UX52 265 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 COX14Q96I36 57 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 CGB1A6NKQ9 187 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 COL8A1P27658 744 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 GATA4P43694 442 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 GAGE5Q13069 117 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 GAGE6Q13070 117 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 ANKRD29Q8N6D5 301 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 SLC25A15Q9Y619 301 aa3.2□□□□□ -1.9
SYNE1-207ENST00000367255 ZNF718Q3SXZ3 478 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 C5orf24Q7Z6I8 188 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 TMEM123Q8N131 208 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 TRAV17A0A0B4J275 112 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 J3KRW8 73 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 IGLV3-19P01714 112 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 RPL31P62899 125 aaKnown RBP3.19□□□□□ -1.9
SYNE1-207ENST00000367255 C9orf47Q6ZRZ4 202 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 RPP21Q9H633 154 aaKnown RBP3.19□□□□□ -1.9
SYNE1-207ENST00000367255 MYO7AQ13402 2215 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 NRXN3Q9Y4C0 1643 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 HARBI1Q96MB7 349 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 GPHA2Q96T91 129 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 DLX6P56179 175 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 FBXL15Q9H469 300 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 A0A0U1RQV1 116 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 PRDX2P32119 198 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 EFNA4P52798 201 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 TRAV13-2A0A0B4J235 113 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.19□□□□□ -1.9
SYNE1-207ENST00000367255 VGLL1Q99990 258 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 TMEM14CQ9P0S9 112 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 A0A1W2PRX2 142 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 UCNP55089 124 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 FAM222BQ8WU58 562 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 FLYWCH2Q96CP2 140 aaKnown RBP3.19□□□□□ -1.9
SYNE1-207ENST00000367255 HOXB2P14652 356 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 TDGF1P3P51864 188 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 TEX38Q6PEX7 206 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 C10orf105Q8TEF2 133 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 LHX9Q9NQ69 397 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 IBA57Q5T440 356 aaKnown RBP3.19□□□□□ -1.9
SYNE1-207ENST00000367255 NPCDR1Q9BY65 106 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 RGPD8O14715 1765 aaPredicted RBP3.19□□□□□ -1.9
SYNE1-207ENST00000367255 ABCA1O95477 2261 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 FAM181BA6NEQ2 426 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 C2orf83Q53S99 150 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 OR10AC1Q8NH08 325 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 ZNF418Q8TF45 676 aaPredicted RBP3.19□□□□□ -1.9
SYNE1-207ENST00000367255 FCGR3BO75015 233 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 GDF15Q99988 308 aa3.19□□□□□ -1.9
SYNE1-207ENST00000367255 C1QTNF4Q9BXJ3 329 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms