RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 DYNC2H1Q8NCM8 4307 aaKnown RBP11.2□□□□□ -0.62
CTSD-202ENST00000367196 ZNF320A2RRD8 509 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 OR11H12B2RN74 326 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 OR2C1O95371 312 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 BRWD1-AS2P59051 145 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 FXYD4P59646 89 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 ERVK-16P61578 105 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 POU2AF1Q16633 256 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 ANKRD55Q3KP44 614 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 ZNF57Q68EA5 555 aaPredicted RBP11.2□□□□□ -0.62
CTSD-202ENST00000367196 ADAMTSL5Q6ZMM2 481 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 HSD17B13Q7Z5P4 300 aaPredicted RBP11.2□□□□□ -0.62
CTSD-202ENST00000367196 GVQW1Q8N7I0 195 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 OR5AP2Q8NGF4 316 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 OR5H6Q8NGV6 325 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 GIMAP1Q8WWP7 306 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 CCDC140Q96MF4 163 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 FANCD2OSQ96PS1 177 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 SRD5A3Q9H8P0 318 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 PLEKHA2Q9HB19 425 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 COMMD9Q9P000 198 aa11.2□□□□□ -0.62
CTSD-202ENST00000367196 IGLV11-55A0A075B6I3 123 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 ZNF785A8K8V0 405 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 E7EUB6 86 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 SULT1C2O00338 296 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 NDUFB8O95169 186 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 HLA-AP01891 365 aaKnown RBP11.19□□□□□ -0.62
CTSD-202ENST00000367196 CD7P09564 240 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 CLEC2LP0C7M8 214 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 CBLN1P23435 193 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 NEDD8Q15843 81 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 AADACL3Q5VUY0 350 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 TMEM17Q86X19 198 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 DMBX1Q8NFW5 382 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 MARC2Q969Z3 335 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 S100A16Q96FQ6 103 aaKnown RBP11.19□□□□□ -0.62
CTSD-202ENST00000367196 GPHA2Q96T91 129 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 HIPK2Q9H2X6 1198 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 DMRT1Q9Y5R6 373 aa11.19□□□□□ -0.62
CTSD-202ENST00000367196 XRCC3O43542 346 aa11.18□□□□□ -0.62
CTSD-202ENST00000367196 IGHV3-23P01764 117 aa11.18□□□□□ -0.62
CTSD-202ENST00000367196 OR2B8PP59922 312 aa11.18□□□□□ -0.62
CTSD-202ENST00000367196 KCTD21Q4G0X4 260 aa11.18□□□□□ -0.62
CTSD-202ENST00000367196 UBE2NLQ5JXB2 153 aa11.18□□□□□ -0.62
CTSD-202ENST00000367196 LINC00322Q6ZN03 302 aaPredicted RBP11.18□□□□□ -0.62
CTSD-202ENST00000367196 ZNF818PQ6ZRF7 136 aa11.18□□□□□ -0.62
CTSD-202ENST00000367196 C19orf35Q6ZS72 473 aa11.18□□□□□ -0.62
CTSD-202ENST00000367196 DEFB125Q8N687 156 aa11.18□□□□□ -0.62
CTSD-202ENST00000367196 OR51H1Q8NH63 302 aa11.18□□□□□ -0.62
CTSD-202ENST00000367196 WDR89Q96FK6 387 aaPredicted RBP11.18□□□□□ -0.62
CTSD-202ENST00000367196 QTRT1Q9BXR0 403 aaKnown RBP11.18□□□□□ -0.62
CTSD-202ENST00000367196 RNF167Q9H6Y7 350 aa11.18□□□□□ -0.62
CTSD-202ENST00000367196 VCX3AQ9NNX9 186 aa11.18□□□□□ -0.62
CTSD-202ENST00000367196 TMEM140Q9NV12 185 aa11.18□□□□□ -0.62
CTSD-202ENST00000367196 TENM2Q9NT68 2774 aa11.17□□□□□ -0.62
CTSD-202ENST00000367196 A0A1B0GW64 132 aa11.17□□□□□ -0.62
CTSD-202ENST00000367196 UPK2O00526 184 aa11.17□□□□□ -0.62
CTSD-202ENST00000367196 JTBO76095 146 aa11.17□□□□□ -0.62
CTSD-202ENST00000367196 REG1AP05451 166 aa11.17□□□□□ -0.62
CTSD-202ENST00000367196 CLEC3BP05452 202 aa11.17□□□□□ -0.62
CTSD-202ENST00000367196 PTHLHP12272 177 aa11.17□□□□□ -0.62
CTSD-202ENST00000367196 MYOD1P15172 320 aa11.17□□□□□ -0.62
CTSD-202ENST00000367196 TAS2R46P59540 309 aa11.17□□□□□ -0.62
CTSD-202ENST00000367196 CMTM1Q8IZ96 169 aa11.17□□□□□ -0.62
CTSD-202ENST00000367196 OR52B4Q8NGK2 314 aa11.17□□□□□ -0.62
CTSD-202ENST00000367196 EHFQ9NZC4 300 aa11.17□□□□□ -0.62
CTSD-202ENST00000367196 UFC1Q9Y3C8 167 aa11.17□□□□□ -0.62
CTSD-202ENST00000367196 TRAV25A0A0B4J276 109 aa11.16□□□□□ -0.62
CTSD-202ENST00000367196 IGLC7A0M8Q6 106 aa11.16□□□□□ -0.62
CTSD-202ENST00000367196 TMEM213A2RRL7 107 aa11.16□□□□□ -0.62
CTSD-202ENST00000367196 MARCH11A6NNE9 402 aa11.16□□□□□ -0.62
CTSD-202ENST00000367196 PTBP1P26599 531 aaKnown RBP eCLIP11.16□□□□□ -0.62
CTSD-202ENST00000367196 ELLP55199 621 aaPredicted RBP11.16□□□□□ -0.62
CTSD-202ENST00000367196 TMEM69Q5SWH9 247 aa11.16□□□□□ -0.62
CTSD-202ENST00000367196 PLET1Q6UQ28 207 aa11.16□□□□□ -0.62
CTSD-202ENST00000367196 RBPMS2Q6ZRY4 209 aaKnown RBP11.16□□□□□ -0.62
CTSD-202ENST00000367196 TMEM61Q8N0U2 210 aa11.16□□□□□ -0.62
CTSD-202ENST00000367196 GDPD1Q8N9F7 314 aa11.16□□□□□ -0.62
CTSD-202ENST00000367196 UXS1Q8NBZ7 420 aa11.16□□□□□ -0.62
CTSD-202ENST00000367196 TSPAN14Q8NG11 270 aa11.16□□□□□ -0.62
CTSD-202ENST00000367196 ZNF502Q8TBZ5 544 aa11.16□□□□□ -0.62
CTSD-202ENST00000367196 VN1R17PQ8TDU5 208 aa11.16□□□□□ -0.62
CTSD-202ENST00000367196 MRPL27Q9P0M9 148 aaKnown RBP11.16□□□□□ -0.62
CTSD-202ENST00000367196 S4R3C0 116 aa11.16□□□□□ -0.62
CTSD-202ENST00000367196 CSMD3Q7Z407 3707 aa11.16□□□□□ -0.62
CTSD-202ENST00000367196 RBMY1BA6NDE4 496 aaKnown RBP11.15□□□□□ -0.62
CTSD-202ENST00000367196 RBMY1EA6NEQ0 496 aaKnown RBP11.15□□□□□ -0.62
CTSD-202ENST00000367196 MFSD2BA6NFX1 497 aa11.15□□□□□ -0.62
CTSD-202ENST00000367196 CGB1A6NKQ9 187 aa11.15□□□□□ -0.62
CTSD-202ENST00000367196 S1PR2O95136 353 aa11.15□□□□□ -0.62
CTSD-202ENST00000367196 FCER2P06734 321 aa11.15□□□□□ -0.62
CTSD-202ENST00000367196 RBMY1DP0C7P1 496 aaKnown RBP11.15□□□□□ -0.62
CTSD-202ENST00000367196 TRAPPC2P0DI81 140 aa11.15□□□□□ -0.62
CTSD-202ENST00000367196 TRAPPC2BP0DI82 140 aa11.15□□□□□ -0.62
CTSD-202ENST00000367196 S100GP29377 79 aa11.15□□□□□ -0.62
CTSD-202ENST00000367196 GPR183P32249 361 aa11.15□□□□□ -0.62
CTSD-202ENST00000367196 OR1L6Q8NGR2 347 aa11.15□□□□□ -0.62
CTSD-202ENST00000367196 OR5H2Q8NGV7 314 aa11.15□□□□□ -0.62
CTSD-202ENST00000367196 CACNG8Q8WXS5 425 aa11.15□□□□□ -0.62
CTSD-202ENST00000367196 LSM10Q969L4 123 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms