RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 FAM231AP0DMU4 169 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 FAM231CP0DMU5 169 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 AREGP15514 252 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 RPA2P15927 270 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 HTR2CP28335 458 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 CAPGP40121 348 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 TMBIM6P55061 237 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 UBE2KP61086 200 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 RPS11P62280 158 aaKnown RBP eCLIP6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 MRPS15P82914 257 aaKnown RBP6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 GPR176Q14439 515 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 C12orf74Q32Q52 190 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 FAM209BQ5JX69 171 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 AWAT2Q6E213 333 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 JAGN1Q8N5M9 183 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 TEX45Q8NA69 505 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 LHFPL5Q8TAF8 219 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 SETD6Q8TBK2 473 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 ACOT12Q8WYK0 555 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 MARC2Q969Z3 335 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 BCL7BQ9BQE9 202 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 CENPOQ9BU64 300 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 SDHAF2Q9NX18 166 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 PPP1R14DQ9NXH3 145 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 TMA7Q9Y2S6 64 aaKnown RBP6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 RPL36Q9Y3U8 105 aaKnown RBP6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 DEFB131BA0A096LNP1 70 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 TRBV5-5A0A0J9YX44 114 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 A0A1W2PPK0 400 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 SAC3D1A6NKF1 404 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 LALBAP00709 142 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 CA1P00915 261 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 CLEC3BP05452 202 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 CTSDP07339 412 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 LIMS3P0CW19 117 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 LIMS4P0CW20 117 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 SAA1P0DJI8 122 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 INAFM2P0DMQ5 153 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 MYOD1P15172 320 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 KLK9Q2XQG4 91 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 CCDC58Q4VC31 144 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 C1orf134Q5TEV5 83 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 OR4A47Q6IF82 309 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 AKAP14Q86UN6 197 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 PQLC1Q8N2U9 271 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 NICN1Q9BSH3 213 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 ZNF436Q9C0F3 470 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 AMBNQ9NP70 447 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 RDH8Q9NYR8 311 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 ZNF221Q9UK13 617 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 KLK9Q9UKQ9 250 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 ZNF257Q9Y2Q1 563 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 X6R8D5 127 aa6.09□□□□□ -1.43
HMGB1P39-201ENST00000366304 HMCN2Q8NDA2 5059 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 TRBV5-7A0A0A0MS05 114 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 TRBV6-6A0A0A6YYG2 114 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 CGB1A6NKQ9 187 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 LINC00473A8K010 186 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 NPIPB5A8MRT5 1133 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 EI24O14681 340 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 ZNF207O43670 478 aaKnown RBP6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 ALPLP05186 524 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 REG1AP05451 166 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 CD2P06729 351 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 GABRB1P18505 474 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 PI3P19957 117 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 GALP22466 123 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 ZBTB25P24278 435 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 DCKP27707 260 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 PSMB6P28072 239 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 GPR183P32249 361 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 GBX2P52951 348 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 SNRPGP62308 76 aaKnown RBP6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 HLA-DRB3P79483 266 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 TMEM187Q14656 261 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 MED22Q15528 200 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 ZNF600Q6ZNG1 722 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 VKORC1L1Q8N0U8 176 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 ZNF502Q8TBZ5 544 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 TMEM190Q8WZ59 177 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 SPIN2AQ99865 258 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 SPIN2BQ9BPZ2 258 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 OR2D2Q9H210 308 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 AK3Q9UIJ7 227 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 DAPK2Q9UIK4 370 aa6.08□□□□□ -1.44
HMGB1P39-201ENST00000366304 IGLV11-55A0A075B6I3 123 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 OR4C46A6NHA9 309 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 CRYGCP07315 174 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 BTF3P20290 206 aaKnown RBP6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 TFPI2P48307 235 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 SERPINB10P48595 397 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 ELLP55199 621 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 KRTAP10-2P60368 255 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 VBP1P61758 197 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 IFITM2Q01629 132 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 UNC119Q13432 240 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 VMA21Q3ZAQ7 101 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 LCE4AQ5TA78 99 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 OR2G6Q5TZ20 316 aa6.07□□□□□ -1.44
HMGB1P39-201ENST00000366304 RPL22L1Q6P5R6 122 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms