RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 FTCDNL1E5RQL4 147 aa0.24□□□□□ -2.37
RNU4-28P-201ENST00000364739 ZNF846Q147U1 533 aa0.24□□□□□ -2.37
RNU4-28P-201ENST00000364739 SBSPONQ8IVN8 264 aa0.24□□□□□ -2.37
RNU4-28P-201ENST00000364739 TBC1D19Q8N5T2 526 aa0.24□□□□□ -2.37
RNU4-28P-201ENST00000364739 UBL4BQ8N7F7 174 aa0.24□□□□□ -2.37
RNU4-28P-201ENST00000364739 OR1M1Q8NGA1 313 aa0.24□□□□□ -2.37
RNU4-28P-201ENST00000364739 EEF1AKMT1Q8WVE0 214 aa0.24□□□□□ -2.37
RNU4-28P-201ENST00000364739 YIPF3Q9GZM5 350 aa0.24□□□□□ -2.37
RNU4-28P-201ENST00000364739 EURLQ9NYK6 297 aa0.24□□□□□ -2.37
RNU4-28P-201ENST00000364739 OR5AC2Q9NZP5 309 aa0.24□□□□□ -2.37
RNU4-28P-201ENST00000364739 ANAPC10Q9UM13 185 aa0.24□□□□□ -2.37
RNU4-28P-201ENST00000364739 CNTRLQ7Z7A1 2325 aa0.24□□□□□ -2.37
RNU4-28P-201ENST00000364739 C19orf84I3L1E1 186 aa0.23□□□□□ -2.37
RNU4-28P-201ENST00000364739 I3L521 148 aa0.23□□□□□ -2.37
RNU4-28P-201ENST00000364739 ORM1P02763 201 aa0.23□□□□□ -2.37
RNU4-28P-201ENST00000364739 SULT1A3P0DMM9 295 aa0.23□□□□□ -2.37
RNU4-28P-201ENST00000364739 SULT1A4P0DMN0 295 aa0.23□□□□□ -2.37
RNU4-28P-201ENST00000364739 CSN1S1P47710 185 aa0.23□□□□□ -2.37
RNU4-28P-201ENST00000364739 RAB13P51153 203 aa0.23□□□□□ -2.37
RNU4-28P-201ENST00000364739 NDUFA5Q16718 116 aa0.23□□□□□ -2.37
RNU4-28P-201ENST00000364739 SBSNQ6UWP8 590 aa0.23□□□□□ -2.37
RNU4-28P-201ENST00000364739 HAVCR2Q8TDQ0 301 aa0.23□□□□□ -2.37
RNU4-28P-201ENST00000364739 DERL2Q9GZP9 239 aa0.23□□□□□ -2.37
RNU4-28P-201ENST00000364739 SLC22A4Q9H015 551 aa0.23□□□□□ -2.37
RNU4-28P-201ENST00000364739 XAGE1AQ9HD64 81 aa0.23□□□□□ -2.37
RNU4-28P-201ENST00000364739 ZFP30Q9Y2G7 519 aa0.23□□□□□ -2.37
RNU4-28P-201ENST00000364739 DENND4CQ5VZ89 1909 aa0.23□□□□□ -2.37
RNU4-28P-201ENST00000364739 A0A087WX48 190 aa0.22□□□□□ -2.37
RNU4-28P-201ENST00000364739 TPM1P09493 284 aa0.22□□□□□ -2.37
RNU4-28P-201ENST00000364739 SUPT4H1P63272 117 aaKnown RBP0.22□□□□□ -2.37
RNU4-28P-201ENST00000364739 AADACL4Q5VUY2 407 aa0.22□□□□□ -2.37
RNU4-28P-201ENST00000364739 TMEM251Q8N6I4 163 aa0.22□□□□□ -2.37
RNU4-28P-201ENST00000364739 ANKRD7Q92527 254 aa0.22□□□□□ -2.37
RNU4-28P-201ENST00000364739 APCP25054 2843 aa0.22□□□□□ -2.37
RNU4-28P-201ENST00000364739 TTC21AQ8NDW8 1320 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 A0A1B0GW54 56 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 GGT3PA6NGU5 568 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 GOLGA6L10A6NI86 522 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 C21orf140B9A014 251 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 LST1O00453 97 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 SLC22A1O15245 554 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 TOX3O15405 576 aaPredicted RBP0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 NEMFO60524 1076 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 NDUFS6O75380 124 aaKnown RBP0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 S100A7P31151 101 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 EIF2B2P49770 351 aaKnown RBP0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 CXCR4P61073 352 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 UBE2IP63279 158 aaKnown RBP0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 PMS2P3Q13401 168 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 TNFAIP8L3Q5GJ75 292 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 Q8N6K4 173 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 HES4Q9HCC6 221 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 TREM1Q9NP99 234 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 GPR84Q9NQS5 396 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 MCM3APO60318 1980 aa0.21□□□□□ -2.38
RNU4-28P-201ENST00000364739 KIF15Q9NS87 1388 aa0.2□□□□□ -2.38
RNU4-28P-201ENST00000364739 TINCRA0A1B0GVN0 87 aa0.2□□□□□ -2.38
RNU4-28P-201ENST00000364739 ZNF879B4DU55 563 aa0.2□□□□□ -2.38
RNU4-28P-201ENST00000364739 F8VZ95 297 aa0.2□□□□□ -2.38
RNU4-28P-201ENST00000364739 ZNF93P35789 620 aaPredicted RBP0.2□□□□□ -2.38
RNU4-28P-201ENST00000364739 ZNF75CPQ92670 426 aaPredicted RBP0.2□□□□□ -2.38
RNU4-28P-201ENST00000364739 IGHV3-7P01780 117 aa0.19□□□□□ -2.38
RNU4-28P-201ENST00000364739 CLPSP04118 112 aa0.19□□□□□ -2.38
RNU4-28P-201ENST00000364739 REG1AP05451 166 aa0.19□□□□□ -2.38
RNU4-28P-201ENST00000364739 OR4D2P58180 307 aa0.19□□□□□ -2.38
RNU4-28P-201ENST00000364739 DNM1P34Q6PK57 102 aa0.19□□□□□ -2.38
RNU4-28P-201ENST00000364739 OR7G1Q8NGA0 311 aa0.19□□□□□ -2.38
RNU4-28P-201ENST00000364739 PAQR5Q9NXK6 330 aaPredicted RBP0.19□□□□□ -2.38
RNU4-28P-201ENST00000364739 FUT9Q9Y231 359 aa0.19□□□□□ -2.38
RNU4-28P-201ENST00000364739 FAT4Q6V0I7 4981 aa0.19□□□□□ -2.38
RNU4-28P-201ENST00000364739 LOC110117498A0A087WWA1 95 aa0.18□□□□□ -2.38
RNU4-28P-201ENST00000364739 SHBGP04278 402 aa0.18□□□□□ -2.38
RNU4-28P-201ENST00000364739 METTL15P1P0C7V9 234 aa0.18□□□□□ -2.38
RNU4-28P-201ENST00000364739 PET100P0DJ07 73 aa0.18□□□□□ -2.38
RNU4-28P-201ENST00000364739 CCL1P22362 96 aa0.18□□□□□ -2.38
RNU4-28P-201ENST00000364739 FXYD2P54710 66 aa0.18□□□□□ -2.38
RNU4-28P-201ENST00000364739 SPATA8Q6RVD6 105 aa0.18□□□□□ -2.38
RNU4-28P-201ENST00000364739 FAM19A5Q7Z5A7 132 aaPredicted RBP0.18□□□□□ -2.38
RNU4-28P-201ENST00000364739 CHMP5Q9NZZ3 219 aa0.18□□□□□ -2.38
RNU4-28P-201ENST00000364739 NAV3Q8IVL0 2385 aa0.18□□□□□ -2.38
RNU4-28P-201ENST00000364739 FRAS1Q86XX4 4008 aa0.17□□□□□ -2.38
RNU4-28P-201ENST00000364739 MAST4O15021 2626 aa0.17□□□□□ -2.38
RNU4-28P-201ENST00000364739 C1orf194Q5T5A4 169 aa0.17□□□□□ -2.38
RNU4-28P-201ENST00000364739 IGKV1D-42A0A075B6H8 117 aa0.16□□□□□ -2.38
RNU4-28P-201ENST00000364739 COCHO43405 550 aa0.16□□□□□ -2.38
RNU4-28P-201ENST00000364739 TNFAIP6P98066 277 aaPredicted RBP0.16□□□□□ -2.38
RNU4-28P-201ENST00000364739 ANGPT1Q15389 498 aa0.16□□□□□ -2.38
RNU4-28P-201ENST00000364739 C5orf46Q6UWT4 87 aa0.16□□□□□ -2.38
RNU4-28P-201ENST00000364739 AAED1Q7RTV5 226 aa0.16□□□□□ -2.38
RNU4-28P-201ENST00000364739 CD302Q8IX05 232 aa0.16□□□□□ -2.38
RNU4-28P-201ENST00000364739 WFDC11Q8NEX6 87 aa0.16□□□□□ -2.38
RNU4-28P-201ENST00000364739 C19orf60Q96EN9 201 aa0.16□□□□□ -2.38
RNU4-28P-201ENST00000364739 PXMP4Q9Y6I8 212 aa0.16□□□□□ -2.38
RNU4-28P-201ENST00000364739 SCN3AQ9NY46 2000 aa0.16□□□□□ -2.38
RNU4-28P-201ENST00000364739 PEAK1Q9H792 1746 aa0.16□□□□□ -2.38
RNU4-28P-201ENST00000364739 E9PCH4 1651 aa0.15□□□□□ -2.39
RNU4-28P-201ENST00000364739 FADS1O60427 444 aa0.15□□□□□ -2.39
RNU4-28P-201ENST00000364739 PRH1P02810 166 aa0.15□□□□□ -2.39
RNU4-28P-201ENST00000364739 UGT2B7P16662 529 aa0.15□□□□□ -2.39
RNU4-28P-201ENST00000364739 RPS4Y1P22090 263 aaKnown RBP0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms