RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 TMEM95Q3KNT9 176 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 PLET1Q6UQ28 207 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 HSD17B13Q7Z5P4 300 aaPredicted RBP10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 NRARPQ7Z6K4 114 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 LYG2Q86SG7 212 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 MINDY2Q8NBR6 621 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 OR5B3Q8NH48 314 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 OR4A16Q8NH70 328 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 SRSF12Q8WXF0 261 aaKnown RBP10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 COMMD5Q9GZQ3 224 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 TMEM14BQ9NUH8 114 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 ZNF257Q9Y2Q1 563 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 TNCP24821 2201 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 TRAV41A0A0B4J266 112 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 PSMB11A5LHX3 300 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 C15orf61A6NNL5 157 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 BRI3O95415 125 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 IGKV1-5P01602 117 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 IGHG4P01861 327 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 ELANEP08246 267 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 PPIFP30405 207 aaKnown RBP10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 RPL27AP46776 148 aaKnown RBP10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 C4orf46Q504U0 113 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 C19orf54Q5BKX5 351 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 TMEM268Q5VZI3 342 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 TEX38Q6PEX7 206 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 C3orf56Q8N813 242 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 OR4X2Q8NGF9 303 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 OR5M8Q8NGP6 311 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 COQ8AQ8NI60 647 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 LHFPL5Q8TAF8 219 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 ABHD5Q8WTS1 349 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 NOL4LQ96MY1 436 aaPredicted RBP10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 COA4Q9NYJ1 87 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 FOXA2Q9Y261 457 aaPredicted RBP10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 TMED3Q9Y3Q3 217 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 STAB1Q9NY15 2570 aa10.87□□□□□ -0.67
NSMCE1-201ENST00000361439 TENM1Q9UKZ4 2725 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 TRAV6A0A075B6T7 132 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 MSGN1A6NI15 193 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 H3BUA1 57 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 HAX1O00165 279 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 PRAF2O60831 178 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 IL5P05113 134 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 OR9G9P0C7N8 305 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 SLC25A6P12236 298 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 ANXA7P20073 488 aaKnown RBP10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 FOXE3Q13461 319 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 AARDQ4LEZ3 155 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 SHISA2Q6UWI4 295 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 MRPL41Q8IXM3 137 aaKnown RBP10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 SLC35G3Q8N808 338 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 RNF152Q8N8N0 203 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 LFNGQ8NES3 379 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 OR5AU1Q8NGC0 362 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 OR1L8Q8NGR8 309 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 RNASE11Q8TAA1 199 aaKnown RBP10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 GRPEL2Q8TAA5 225 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 PHB2Q99623 299 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 CITED1Q99966 193 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 MARVELD1Q9BSK0 173 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 QTRT1Q9BXR0 403 aaKnown RBP10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 FBXO7Q9Y3I1 522 aa10.86□□□□□ -0.67
NSMCE1-201ENST00000361439 TRAV3A0A0B4J244 114 aa10.85□□□□□ -0.67
NSMCE1-201ENST00000361439 A0A0B4J293 547 aa10.85□□□□□ -0.67
NSMCE1-201ENST00000361439 IGLV1-40P01703 118 aa10.85□□□□□ -0.67
NSMCE1-201ENST00000361439 OR2B8PP59922 312 aa10.85□□□□□ -0.67
NSMCE1-201ENST00000361439 ANKRD55Q3KP44 614 aa10.85□□□□□ -0.67
NSMCE1-201ENST00000361439 UNQ5815/PRO19632Q6UWF5 114 aa10.85□□□□□ -0.67
NSMCE1-201ENST00000361439 TTC9CQ8N5M4 171 aa10.85□□□□□ -0.67
NSMCE1-201ENST00000361439 OR52E5Q8NH55 327 aa10.85□□□□□ -0.67
NSMCE1-201ENST00000361439 CASTOR1Q8WTX7 329 aa10.85□□□□□ -0.67
NSMCE1-201ENST00000361439 MITD1Q8WV92 249 aa10.85□□□□□ -0.67
NSMCE1-201ENST00000361439 NDUFA4L2Q9NRX3 87 aa10.85□□□□□ -0.67
NSMCE1-201ENST00000361439 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.85□□□□□ -0.67
NSMCE1-201ENST00000361439 OR51B2Q9Y5P1 312 aa10.85□□□□□ -0.67
NSMCE1-201ENST00000361439 PLXNB1O43157 2135 aa10.85□□□□□ -0.67
NSMCE1-201ENST00000361439 TEX50A0A1B0GTY4 177 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 A0A1B0GU03 582 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 NPIPB5A8MRT5 1133 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 TEX22C9J3V5 150 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 INMT-MINDY4F8WBC2 141 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 G3V318 75 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 FBXO24O75426 580 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 RBMXL2O75526 392 aaKnown RBP10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 DHFRP00374 187 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 OPN1MWP04001 364 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 TRAPPC2P0DI81 140 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 TRAPPC2BP0DI82 140 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 OPN1MW2P0DN77 364 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 OPN1MW3P0DN78 364 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 PSMB8P28062 276 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 HSPE1P61604 102 aaKnown RBP10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 CD83Q01151 205 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 ECSCRQ19T08 205 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 PDLIM3Q53GG5 364 aaPredicted RBP10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 NMSQ5H8A3 153 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 CXorf66Q5JRM2 361 aaPredicted RBP10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 LYZL2Q7Z4W2 148 aa10.84□□□□□ -0.67
NSMCE1-201ENST00000361439 ZNF431Q8TF32 576 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms