RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 LGALS3P17931 250 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-201ENST00000361246 BRD3OSQ6XYD6 125 aa17.13■□□□□ 0.33
CDC42BPB-201ENST00000361246 TAF15Q92804 592 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDC42BPB-201ENST00000361246 GALNT14Q96FL9 552 aa17.13■□□□□ 0.33
CDC42BPB-201ENST00000361246 CACNA1IQ9P0X4 2223 aa17.13■□□□□ 0.33
CDC42BPB-201ENST00000361246 GATA2P23769 480 aaPredicted RBP17.13■□□□□ 0.33
CDC42BPB-201ENST00000361246 ZNF79Q15937 498 aa17.13■□□□□ 0.33
CDC42BPB-201ENST00000361246 LINC00469Q8N7U9 141 aa17.13■□□□□ 0.33
CDC42BPB-201ENST00000361246 A8MWL6 223 aa17.13■□□□□ 0.33
CDC42BPB-201ENST00000361246 P2RY4P51582 365 aa17.13■□□□□ 0.33
CDC42BPB-201ENST00000361246 PLA2G10O15496 165 aa17.13■□□□□ 0.33
CDC42BPB-201ENST00000361246 TP53RKQ96S44 253 aa17.13■□□□□ 0.33
CDC42BPB-201ENST00000361246 WNT10AQ9GZT5 417 aa17.13■□□□□ 0.33
CDC42BPB-201ENST00000361246 FXYD7P58549 80 aa17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 CTHRC1Q96CG8 243 aa17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 SAP30O75446 220 aa17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 Q96M66 194 aa17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 TNFRSF18Q9Y5U5 241 aa17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 C7orf77A4D0Y5 90 aa17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 LY6HO94772 140 aa17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 RPL35AP18077 110 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 RIPPLY2Q5TAB7 128 aa17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 FAM71F2Q6NXP2 309 aa17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 TMEM101Q96IK0 257 aa17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 MAP1LC3AQ9H492 121 aa17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 GGCTO75223 188 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 PNRC1Q12796 327 aaPredicted RBP17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 LEMD1Q68G75 181 aa17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 MUC1P15941 1255 aaPredicted RBP17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 ZXDCQ2QGD7 858 aaPredicted RBP17.12■□□□□ 0.33
CDC42BPB-201ENST00000361246 ATG101Q9BSB4 218 aa17.11■□□□□ 0.33
CDC42BPB-201ENST00000361246 WDR82Q6UXN9 313 aa17.11■□□□□ 0.33
CDC42BPB-201ENST00000361246 CSRP1P21291 193 aaKnown RBP17.11■□□□□ 0.33
CDC42BPB-201ENST00000361246 NPFFR1Q9GZQ6 430 aa17.11■□□□□ 0.33
CDC42BPB-201ENST00000361246 NABP2Q9BQ15 211 aa17.11■□□□□ 0.33
CDC42BPB-201ENST00000361246 PEMTQ9UBM1 199 aa17.11■□□□□ 0.33
CDC42BPB-201ENST00000361246 TDGF1P13385 188 aa17.11■□□□□ 0.33
CDC42BPB-201ENST00000361246 FSTP19883 344 aa17.11■□□□□ 0.33
CDC42BPB-201ENST00000361246 ZNF146Q15072 292 aa17.11■□□□□ 0.33
CDC42BPB-201ENST00000361246 ZNF585BQ52M93 769 aa17.11■□□□□ 0.33
CDC42BPB-201ENST00000361246 LYRM7Q5U5X0 104 aa17.11■□□□□ 0.33
CDC42BPB-201ENST00000361246 ZIC4Q8N9L1 334 aa17.11■□□□□ 0.33
CDC42BPB-201ENST00000361246 PRSS22Q9GZN4 317 aa17.11■□□□□ 0.33
CDC42BPB-201ENST00000361246 SCGB1A1P11684 91 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 IRF3Q14653 427 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 NYNRINQ9P2P1 1898 aaKnown RBP17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 CYP2G1PQ6ZSU1 146 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 C18orf15Q96N68 181 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 C17orf98A8MV24 154 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 TRBV20OR9-2A0A075B6H5 130 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 TRBV5-5A0A0J9YX44 114 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 RBFOX2O43251 390 aaKnown RBP eCLIP17.1■□□□□ 0.338e-8■□□□□ 8.6
CDC42BPB-201ENST00000361246 HOXA6P31267 233 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 RAG2P55895 527 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 ZFP30Q9Y2G7 519 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 LCTP09848 1927 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 IGHV1-18A0A0C4DH31 117 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 C8orf88P0DMB2 117 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 SEMA5BQ9P283 1151 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 HLA-DQB1P01920 261 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 RPLP1P05386 114 aaKnown RBP17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 SELENOTP62341 195 aa17.1■□□□□ 0.33
CDC42BPB-201ENST00000361246 C12orf77C9JDV5 145 aa17.09■□□□□ 0.33
CDC42BPB-201ENST00000361246 GRIFINA4D1Z8 144 aa17.09■□□□□ 0.33
CDC42BPB-201ENST00000361246 IGFBP2P18065 325 aa17.09■□□□□ 0.33
CDC42BPB-201ENST00000361246 A0A0G2JLM5 398 aa17.09■□□□□ 0.33
CDC42BPB-201ENST00000361246 IGHMP01871 453 aa17.09■□□□□ 0.33
CDC42BPB-201ENST00000361246 GTF3AQ92664 365 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-201ENST00000361246 LINC00470Q9BZP3 86 aa17.09■□□□□ 0.33
CDC42BPB-201ENST00000361246 BCL2P10415 239 aa17.09■□□□□ 0.33
CDC42BPB-201ENST00000361246 BEND2Q8NDZ0 799 aa17.09■□□□□ 0.33
CDC42BPB-201ENST00000361246 TMEM218A2RU14 115 aa17.08■□□□□ 0.33
CDC42BPB-201ENST00000361246 DIRC3C9JPN6 131 aa17.08■□□□□ 0.33
CDC42BPB-201ENST00000361246 COX5BP10606 129 aa17.08■□□□□ 0.33
CDC42BPB-201ENST00000361246 FAM74A3Q4VXF1 159 aa17.08■□□□□ 0.33
CDC42BPB-201ENST00000361246 ATOH7Q8N100 152 aa17.08■□□□□ 0.33
CDC42BPB-201ENST00000361246 IMMP1LQ96LU5 166 aa17.08■□□□□ 0.32
CDC42BPB-201ENST00000361246 C5orf66Q9H5L9 145 aa17.08■□□□□ 0.32
CDC42BPB-201ENST00000361246 JMJD8Q96S16 334 aa17.08■□□□□ 0.32
CDC42BPB-201ENST00000361246 COL4A6Q14031 1691 aa17.08■□□□□ 0.32
CDC42BPB-201ENST00000361246 TRAV24A0A0B4J272 114 aa17.08■□□□□ 0.32
CDC42BPB-201ENST00000361246 TFF3Q07654 80 aa17.08■□□□□ 0.32
CDC42BPB-201ENST00000361246 VAX1Q5SQQ9 334 aa17.08■□□□□ 0.32
CDC42BPB-201ENST00000361246 TEX45Q8NA69 505 aa17.08■□□□□ 0.32
CDC42BPB-201ENST00000361246 MALP21145 153 aa17.07■□□□□ 0.32
CDC42BPB-201ENST00000361246 TMEM45BQ96B21 275 aa17.07■□□□□ 0.32
CDC42BPB-201ENST00000361246 VMO1Q7Z5L0 202 aa17.07■□□□□ 0.32
CDC42BPB-201ENST00000361246 TP53BP1Q12888 1972 aaPredicted RBP17.07■□□□□ 0.32
CDC42BPB-201ENST00000361246 C9orf62Q8N4C0 152 aa17.07■□□□□ 0.32
CDC42BPB-201ENST00000361246 YLPM1P49750 1951 aaKnown RBP17.07■□□□□ 0.32
CDC42BPB-201ENST00000361246 CXCL2P19875 107 aa17.07■□□□□ 0.32
CDC42BPB-201ENST00000361246 PRR30Q53SZ7 412 aaPredicted RBP17.07■□□□□ 0.32
CDC42BPB-201ENST00000361246 HIST1H4GQ99525 98 aa17.07■□□□□ 0.32
CDC42BPB-201ENST00000361246 ACAA1P09110 424 aaPredicted RBP17.07■□□□□ 0.32
CDC42BPB-201ENST00000361246 RAB24Q969Q5 203 aa17.07■□□□□ 0.32
CDC42BPB-201ENST00000361246 C21orf62Q9NYP8 219 aa17.07■□□□□ 0.32
CDC42BPB-201ENST00000361246 CLDND2Q8NHS1 167 aa17.07■□□□□ 0.32
CDC42BPB-201ENST00000361246 PIN1P1O15428 100 aa17.06■□□□□ 0.32
CDC42BPB-201ENST00000361246 C3orf56Q8N813 242 aa17.06■□□□□ 0.32
CDC42BPB-201ENST00000361246 SAXO1Q8IYX7 474 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms