RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 TMEM138Q9NPI0 162 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 TCRBV3S1A0A5B6 114 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 MCRIP1C9JLW8 97 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 PDCD6O75340 191 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 UBBP0CG47 229 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 GABRB1P18505 474 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 SRMP19623 302 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 VAMP1P23763 118 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 PTBP1P26599 531 aaKnown RBP eCLIP4.27□□□□□ -1.731e-7■■■■□ 24.1
CDC42SE2-201ENST00000360515 QRFPP83859 136 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 RHOGP84095 191 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 MEDAGQ5VYS4 303 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 LAMTOR1Q6IAA8 161 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 ZNF66Q6ZN08 573 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 PRSS48Q7RTY5 328 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 NRARPQ7Z6K4 114 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 ZDHHC13Q8IUH4 622 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 C15orf53Q8NAA6 179 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR13C3Q8NGS6 347 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 NEDD4LQ96PU5 975 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 RARRES2Q99969 163 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 IMPAD1Q9NX62 359 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 CBY1Q9Y3M2 126 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 HSPB11Q9Y547 144 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 GNRHRP30968 328 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 BATF2Q8N1L9 274 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 ZNF645Q8N7E2 425 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 CLRN3Q8NCR9 226 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR8J1Q8NGP2 316 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 TMEM167AQ8TBQ9 72 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 ACOT12Q8WYK0 555 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 ZNF581Q9P0T4 197 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 ELF5Q9UKW6 265 aaPredicted RBP4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 ELOA3CA0A087WX78 387 aaPredicted RBP4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 FCER2P06734 321 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 TMEM225BP0DP42 221 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 RSU1Q15404 277 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 FAM220AQ7Z4H9 259 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 C6orf223Q8N319 242 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR2AK2Q8NG84 335 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 RBPMSQ93062 196 aaKnown RBP4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 EEF1AKMT3Q96AZ1 226 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 TXN2Q99757 166 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 SPIN2AQ99865 258 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 SPIN2BQ9BPZ2 258 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 GNG12Q9UBI6 72 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 STEAP1Q9UHE8 339 aa4.26□□□□□ -1.73
CDC42SE2-201ENST00000360515 OXTP01178 125 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 CRHBPP24387 322 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 DAPP51397 102 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 C1orf100Q5SVJ3 147 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 TEX261Q6UWH6 196 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 ZNF705AQ6ZN79 300 aaPredicted RBP4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 Q6ZRN7 208 aaPredicted RBP4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 ZNF485Q8NCK3 441 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR52L2PQ8NGH6 319 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR51A4Q8NGJ6 313 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR6M1Q8NGM8 313 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR13C9Q8NGT0 318 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 ZNF503Q96F45 646 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 PARP12Q9H0J9 701 aaKnown RBP4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 RNF167Q9H6Y7 350 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 PGPEP1Q9NXJ5 209 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 KCNIP1Q9NZI2 227 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 U3KQ87 197 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 UBR4Q5T4S7 5183 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 ZNF705FA8MVS1 300 aaPredicted RBP4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 WRBO00258 174 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 TSC22D2O75157 780 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 IGKV1-16P04430 117 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 ZNF705DP0CH99 300 aaPredicted RBP4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 ZNF705BP0CI00 300 aaPredicted RBP4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 SLC2A2P11168 524 aaPredicted RBP4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 NCS1P62166 190 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 ATP6AP1Q15904 470 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 RBM48Q5RL73 367 aaKnown RBP4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 HSD17B13Q7Z5P4 300 aaPredicted RBP4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 UXS1Q8NBZ7 420 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR11H2Q8NH07 326 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR10AC1Q8NH08 325 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 ZNRF2Q8NHG8 242 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 CD300LFQ8TDQ1 290 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 LINC00052Q96N35 136 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 OR2S2Q9NQN1 319 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 F8W735 103 aaPredicted RBP4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 HTR1AP08908 422 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 HSD17B12Q53GQ0 312 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 CYP2R1Q6VVX0 501 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 MMD2Q8IY49 270 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 TNFAIP8L1Q8WVP5 186 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 CANT1Q8WVQ1 401 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 SRSF12Q8WXF0 261 aaKnown RBP4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 BSCL2Q96G97 398 aaPredicted RBP4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 ABHD14BQ96IU4 210 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 MS4A10Q96PG2 267 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 C11orf54Q9H0W9 315 aaPredicted RBP4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 FGF20Q9NP95 211 aaPredicted RBP4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 H2AFY2Q9P0M6 372 aaPredicted RBP4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 COPZ2Q9P299 210 aa4.25□□□□□ -1.73
CDC42SE2-201ENST00000360515 TBC1D24Q9ULP9 559 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms