RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 USP9XQ93008 2570 aaPredicted RBP8.3□□□□□ -1.08
CUX1-203ENST00000360264 IGHV3-72A0A0B4J1Y9 119 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 LEPROTL1O95214 131 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 MEF2CQ06413 473 aaPredicted RBP8.3□□□□□ -1.08
CUX1-203ENST00000360264 GCSAMLQ5JQS6 135 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 SHANK3Q9BYB0 1731 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 SLC25A47Q6Q0C1 308 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 OR4X2Q8NGF9 303 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 VENTXO95231 258 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 CFHR5Q9BXR6 569 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 NKX2-8O15522 239 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 IGFBP6P24592 240 aaPredicted RBP8.3□□□□□ -1.08
CUX1-203ENST00000360264 DNASE2BQ8WZ79 361 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 GLI3P10071 1580 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 FNDC1Q4ZHG4 1894 aaPredicted RBP8.29□□□□□ -1.08
CUX1-203ENST00000360264 FAM159AQ6UWV7 190 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 PGPEP1Q9NXJ5 209 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 SEMA5BQ9P283 1151 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 CD160O95971 181 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 IGHV4-34P06331 123 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 OR4D11Q8NGI4 311 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 SCTP09683 121 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 CFAP161Q6P656 301 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 EMP1P54849 157 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 PEMTQ9UBM1 199 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 A0A1B0GV72 72 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 TSPAN13O95857 204 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 OSR1Q8TAX0 266 aaPredicted RBP8.29□□□□□ -1.08
CUX1-203ENST00000360264 FMC1Q96HJ9 113 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 SOD3P08294 240 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 PSMB11A5LHX3 300 aa8.29□□□□□ -1.08
CUX1-203ENST00000360264 IGSF11Q5DX21 431 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 SSBP3Q9BWW4 388 aaPredicted RBP8.28□□□□□ -1.08
CUX1-203ENST00000360264 AURKAIP1Q9NWT8 199 aaPredicted RBP8.28□□□□□ -1.08
CUX1-203ENST00000360264 DPM3Q9P2X0 92 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 COL24A1Q17RW2 1714 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 C1QTNF9BB2RNN3 333 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 IL6RP08887 468 aaPredicted RBP8.28□□□□□ -1.08
CUX1-203ENST00000360264 TLNRD1Q9H1K6 362 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 KLK13Q9UKR3 277 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 PRRC2CQ9Y520 2896 aaKnown RBP8.28□□□□□ -1.08
CUX1-203ENST00000360264 OR4D5Q8NGN0 318 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 TMEM106BQ9NUM4 274 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.28□□□□□ -1.08
CUX1-203ENST00000360264 PLAUP00749 431 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 GLRXP35754 106 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 PRSS53Q2L4Q9 553 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 SP7Q8TDD2 431 aaPredicted RBP8.28□□□□□ -1.08
CUX1-203ENST00000360264 GATAD1Q8WUU5 269 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 A0A1W2PPV9 198 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 RBMY1BA6NDE4 496 aaKnown RBP8.28□□□□□ -1.08
CUX1-203ENST00000360264 RBMY1EA6NEQ0 496 aaKnown RBP8.28□□□□□ -1.08
CUX1-203ENST00000360264 RBMY1DP0C7P1 496 aaKnown RBP8.28□□□□□ -1.08
CUX1-203ENST00000360264 RBMY1A1P0DJD3 496 aaKnown RBP8.28□□□□□ -1.08
CUX1-203ENST00000360264 RBMY1CP0DJD4 496 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 HOXA5P20719 270 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 DSCR9P59020 149 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 SP9P0CG40 484 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 NPBWR2P48146 333 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 AICDAQ9GZX7 198 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 V9GYH0 126 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 KLF14Q8TD94 323 aaPredicted RBP8.28□□□□□ -1.08
CUX1-203ENST00000360264 MGAMO43451 1857 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 SSTR5P35346 364 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 SOX21Q9Y651 276 aaPredicted RBP8.28□□□□□ -1.08
CUX1-203ENST00000360264 HYAL3O43820 417 aaPredicted RBP8.28□□□□□ -1.08
CUX1-203ENST00000360264 UCP3P55916 312 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 PKD1L2Q7Z442 2459 aa8.28□□□□□ -1.08
CUX1-203ENST00000360264 IGHV3-21A0A0B4J1V1 117 aa8.27□□□□□ -1.08
CUX1-203ENST00000360264 TRAV39A0A0B4J263 110 aa8.27□□□□□ -1.08
CUX1-203ENST00000360264 MOSP00540 346 aa8.27□□□□□ -1.08
CUX1-203ENST00000360264 C1orf100Q5SVJ3 147 aa8.27□□□□□ -1.08
CUX1-203ENST00000360264 MALP21145 153 aa8.27□□□□□ -1.08
CUX1-203ENST00000360264 OR13C6PQ8NH95 151 aa8.27□□□□□ -1.08
CUX1-203ENST00000360264 GCHFRP30047 84 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 FAM57AQ8TBR7 257 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 SRXN1Q9BYN0 137 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 VDAC2P45880 294 aaPredicted RBP8.27□□□□□ -1.09
CUX1-203ENST00000360264 C1QTNF12Q5T7M4 302 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 OR1P1Q8NH06 330 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 Q96M66 194 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 RARRES2Q99969 163 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 A0A1W2PQF6 199 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 CD69Q07108 199 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 LHFPL6Q9Y693 200 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 TCF21O43680 179 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 ARF6P62330 175 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 ISOC2Q96AB3 205 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 MRPL18Q9H0U6 180 aaKnown RBP8.27□□□□□ -1.09
CUX1-203ENST00000360264 FAM206AQ9NX38 181 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 PEF1Q9UBV8 284 aaKnown RBP8.27□□□□□ -1.09
CUX1-203ENST00000360264 IGKV3OR2-268A0A0C4DH90 116 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 ERGP11308 486 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 PEX7O00628 323 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 MIC13Q5XKP0 118 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 RNASEH2CQ8TDP1 164 aaKnown RBP8.27□□□□□ -1.09
CUX1-203ENST00000360264 NEUROG1Q92886 237 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 HDHD3Q9BSH5 251 aaPredicted RBP8.27□□□□□ -1.09
CUX1-203ENST00000360264 SBF2Q86WG5 1849 aa8.27□□□□□ -1.09
CUX1-203ENST00000360264 TRBV5-3A0A0A0MS03 114 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms