RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PKIBQ9C010 78 aa13.63□□□□□ -0.23
COL18A1-203ENST00000359759 NPDC1Q9NQX5 325 aaPredicted RBP13.63□□□□□ -0.23
COL18A1-203ENST00000359759 PAPPA-AS1Q5QFB9 102 aa13.63□□□□□ -0.23
COL18A1-203ENST00000359759 CDCP2Q5VXM1 449 aa13.63□□□□□ -0.23
COL18A1-203ENST00000359759 TMEM74BQ9NUR3 256 aa13.63□□□□□ -0.23
COL18A1-203ENST00000359759 A0A1W2PRX2 142 aa13.62□□□□□ -0.23
COL18A1-203ENST00000359759 GPR183P32249 361 aa13.62□□□□□ -0.23
COL18A1-203ENST00000359759 C1orf100Q5SVJ3 147 aa13.62□□□□□ -0.23
COL18A1-203ENST00000359759 SPOCK3Q9BQ16 436 aa13.62□□□□□ -0.23
COL18A1-203ENST00000359759 DUSP15Q9H1R2 295 aaPredicted RBP13.62□□□□□ -0.23
COL18A1-203ENST00000359759 C1orf174Q8IYL3 243 aa13.62□□□□□ -0.23
COL18A1-203ENST00000359759 SCARF2Q96GP6 870 aaPredicted RBP13.62□□□□□ -0.23
COL18A1-203ENST00000359759 PAPPAQ13219 1627 aa13.62□□□□□ -0.23
COL18A1-203ENST00000359759 TMEM250H0YL14 139 aa13.62□□□□□ -0.23
COL18A1-203ENST00000359759 ZP1P60852 638 aa13.62□□□□□ -0.23
COL18A1-203ENST00000359759 PRB3Q04118 309 aaPredicted RBP13.62□□□□□ -0.23
COL18A1-203ENST00000359759 RCC1LQ96I51 464 aaKnown RBP13.62□□□□□ -0.23
COL18A1-203ENST00000359759 TNRC6CQ9HCJ0 1690 aaKnown RBP13.62□□□□□ -0.23
COL18A1-203ENST00000359759 PAX2Q02962 417 aa13.62□□□□□ -0.23
COL18A1-203ENST00000359759 OR9G1Q8NH87 305 aa13.62□□□□□ -0.23
COL18A1-203ENST00000359759 CITED2Q99967 270 aaPredicted RBP13.62□□□□□ -0.23
COL18A1-203ENST00000359759 IGHV1-69-2A0A0G2JMI3 117 aa13.62□□□□□ -0.23
COL18A1-203ENST00000359759 SMCHD1A6NHR9 2005 aa13.62□□□□□ -0.23
COL18A1-203ENST00000359759 CTSBP07858 339 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 SSBP4Q9BWG4 385 aaPredicted RBP13.61□□□□□ -0.23
COL18A1-203ENST00000359759 RPRMQ9NS64 109 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 H3BRM9 83 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 GATA2P23769 480 aaPredicted RBP13.61□□□□□ -0.23
COL18A1-203ENST00000359759 ADMP35318 185 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 CNTRLQ7Z7A1 2325 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 ANAPC13Q9BS18 74 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 RPP21Q9H633 154 aaKnown RBP13.61□□□□□ -0.23
COL18A1-203ENST00000359759 SEMA5BQ9P283 1151 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 FAM90A10PA6NDY2 464 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 FAM90A18PA6NE21 464 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 FAM90A16PA6NEW6 464 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 FAM90A20PA6NIJ5 464 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 FAM90A8PA6NJQ4 464 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 FAM90A7PA6NKC0 464 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 FAM90A22PA8MWA6 464 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 FAM90A12PA8MX19 464 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 FAM90A5PA8MXJ8 464 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 FAM90A23PA8MXZ1 464 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 FAM90A15PP0C7V4 464 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 FAM90A13PP0C7W8 464 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 FAM90A14PP0C7W9 464 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 FAM90A24PP0C7X0 464 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 RAMP1O60894 148 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 NBEAP1P0C6P0 100 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 GNG5P63218 68 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 MIR17HGQ75NE6 70 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 C19orf24Q9BVV8 132 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 PGPEP1LA6NFU8 196 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 MSGN1A6NI15 193 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 ATP5J2P56134 94 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 TMEM186Q96B77 213 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 FBXL15Q9H469 300 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 NHP2Q9NX24 153 aaKnown RBP13.61□□□□□ -0.23
COL18A1-203ENST00000359759 TRPM6Q9BX84 2022 aa13.61□□□□□ -0.23
COL18A1-203ENST00000359759 PQLC2LA1A4F0 135 aa13.6□□□□□ -0.23
COL18A1-203ENST00000359759 CTSSP25774 331 aa13.6□□□□□ -0.23
COL18A1-203ENST00000359759 CFAP161Q6P656 301 aa13.6□□□□□ -0.23
COL18A1-203ENST00000359759 SPRED2Q7Z698 418 aa13.6□□□□□ -0.23
COL18A1-203ENST00000359759 LOC390937A0A1W2PQ73 354 aa13.6□□□□□ -0.23
COL18A1-203ENST00000359759 A0A1W2PQF6 199 aa13.6□□□□□ -0.23
COL18A1-203ENST00000359759 LINC01587Q99440 93 aa13.6□□□□□ -0.23
COL18A1-203ENST00000359759 IGHV3-64A0A075B6Q5 118 aa13.6□□□□□ -0.23
COL18A1-203ENST00000359759 ATP5LO75964 103 aa13.6□□□□□ -0.23
COL18A1-203ENST00000359759 MALP21145 153 aa13.6□□□□□ -0.23
COL18A1-203ENST00000359759 FAM201AQ5SY85 155 aa13.6□□□□□ -0.23
COL18A1-203ENST00000359759 SCN8AQ9UQD0 1980 aa13.6□□□□□ -0.23
COL18A1-203ENST00000359759 TSPAN7P41732 249 aa13.6□□□□□ -0.23
COL18A1-203ENST00000359759 CLEC19AQ6UXS0 136 aa13.6□□□□□ -0.23
COL18A1-203ENST00000359759 LINC01560Q8TB33 94 aa13.6□□□□□ -0.23
COL18A1-203ENST00000359759 RNASE7Q9H1E1 156 aaKnown RBP13.6□□□□□ -0.23
COL18A1-203ENST00000359759 ALS2Q96Q42 1657 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 AHRRA9YTQ3 701 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 NHSQ6T4R5 1651 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 TBX6O95947 436 aaPredicted RBP13.59□□□□□ -0.23
COL18A1-203ENST00000359759 IGKV1D-33P01593 117 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 IGKV1-33P01594 117 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 FTH1P19P0C7X4 201 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 STARD6P59095 220 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 NHSL1Q5SYE7 1610 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 ZNF729A6NN14 1252 aaPredicted RBP13.59□□□□□ -0.23
COL18A1-203ENST00000359759 C4orf51C9J302 202 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 FMC1Q96HJ9 113 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 BCORQ6W2J9 1755 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 TRAV8-4A0A0B4J246 113 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 ZNF362Q5T0B9 420 aaPredicted RBP13.59□□□□□ -0.23
COL18A1-203ENST00000359759 DNM1P46Q6ZS02 220 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 JMJD8Q96S16 334 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 TRAV2A0A0B4J234 112 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 EVI2AP22794 236 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 NPC2P61916 151 aa13.59□□□□□ -0.23
COL18A1-203ENST00000359759 MYO16Q9Y6X6 1858 aa13.58□□□□□ -0.23
COL18A1-203ENST00000359759 A0A1B0GUT8 65 aa13.58□□□□□ -0.23
COL18A1-203ENST00000359759 FGF5P12034 268 aa13.58□□□□□ -0.23
COL18A1-203ENST00000359759 MESP2Q0VG99 397 aa13.58□□□□□ -0.23
COL18A1-203ENST00000359759 PTGDSP41222 190 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms