RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 HTN3P15516 51 aa15.6■□□□□ 0.09
SHANK1-202ENST00000359082 APOBEC3AP31941 199 aaPredicted RBP15.6■□□□□ 0.09
SHANK1-202ENST00000359082 FAM201AQ5SY85 155 aa15.6■□□□□ 0.09
SHANK1-202ENST00000359082 EPOPA6NHQ4 379 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 REC114Q7Z4M0 266 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 NPCDR1Q9BY65 106 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 FBXL7Q9UJT9 491 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 ACP7Q6ZNF0 438 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 NUDT10Q8NFP7 164 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 NUDT11Q96G61 164 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 IGHV3OR16-8A0A075B7F1 116 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 C1QTNF9BB2RNN3 333 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 TIAF1O95411 115 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 IGFBP2P18065 325 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 DNASE2BQ8WZ79 361 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 SLC17A3O00476 420 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 NDUFA3O95167 84 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 APOHP02749 345 aaPredicted RBP15.59■□□□□ 0.09
SHANK1-202ENST00000359082 SAPCD1Q5SSQ6 148 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 GGACTQ9BVM4 153 aa15.59■□□□□ 0.09
SHANK1-202ENST00000359082 NPDC1Q9NQX5 325 aaPredicted RBP15.59■□□□□ 0.09
SHANK1-202ENST00000359082 Q5BKY6 102 aa15.58■□□□□ 0.09
SHANK1-202ENST00000359082 ST6GALNAC6Q969X2 333 aa15.58■□□□□ 0.09
SHANK1-202ENST00000359082 TOMM7Q9P0U1 55 aa15.58■□□□□ 0.09
SHANK1-202ENST00000359082 C2orf68Q2NKX9 166 aa15.58■□□□□ 0.08
SHANK1-202ENST00000359082 CLEC19AQ6UXS0 136 aa15.58■□□□□ 0.08
SHANK1-202ENST00000359082 STARD6P59095 220 aa15.58■□□□□ 0.08
SHANK1-202ENST00000359082 KCNS1Q96KK3 526 aa15.58■□□□□ 0.08
SHANK1-202ENST00000359082 SCGB3A1Q96QR1 104 aa15.58■□□□□ 0.08
SHANK1-202ENST00000359082 NUTF2P61970 127 aaKnown RBP15.58■□□□□ 0.08
SHANK1-202ENST00000359082 PAPPA-AS1Q5QFB9 102 aa15.58■□□□□ 0.08
SHANK1-202ENST00000359082 OR11H4Q8NGC9 324 aa15.58■□□□□ 0.08
SHANK1-202ENST00000359082 TMEM106BQ9NUM4 274 aa15.58■□□□□ 0.08
SHANK1-202ENST00000359082 MCM3APO60318 1980 aa15.58■□□□□ 0.08
SHANK1-202ENST00000359082 PEX7O00628 323 aa15.58■□□□□ 0.08
SHANK1-202ENST00000359082 CELA3AP09093 270 aa15.58■□□□□ 0.08
SHANK1-202ENST00000359082 ST6GALNAC3Q8NDV1 305 aa15.58■□□□□ 0.08
SHANK1-202ENST00000359082 FDCSPQ8NFU4 85 aa15.58■□□□□ 0.08
SHANK1-202ENST00000359082 SCO2A0A1W2PP80 73 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 CTAG1AP78358 180 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 MEF2CQ06413 473 aaPredicted RBP15.57■□□□□ 0.08
SHANK1-202ENST00000359082 LINC01587Q99440 93 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 IGKV3D-20A0A0C4DH25 116 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 OR11H12B2RN74 326 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 FAM27E3Q08E93 113 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 ZNF600Q6ZNG1 722 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 OR11H1Q8NG94 326 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 OR11H2Q8NH07 326 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 SIGLEC12Q96PQ1 595 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 PPP1R27Q86WC6 154 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 TMEM183AQ8IXX5 376 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 MPTX1A8MV57 137 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 HIST1H2BAQ96A08 127 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 IMMP2LQ96T52 175 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 GPR183P32249 361 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 SCN4AP35499 1836 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 SEMA5BQ9P283 1151 aa15.57■□□□□ 0.08
SHANK1-202ENST00000359082 RFPL3SP0C7P2 107 aa15.56■□□□□ 0.08
SHANK1-202ENST00000359082 TMEM30BQ3MIR4 351 aa15.56■□□□□ 0.08
SHANK1-202ENST00000359082 UNQ9370/PRO34162Q6UXP9 181 aa15.56■□□□□ 0.08
SHANK1-202ENST00000359082 IFI27L2Q9H2X8 130 aa15.56■□□□□ 0.08
SHANK1-202ENST00000359082 NPIPB9F8W1W9 429 aa15.56■□□□□ 0.08
SHANK1-202ENST00000359082 NPIPB7O75200 414 aa15.56■□□□□ 0.08
SHANK1-202ENST00000359082 NHLRC3Q5JS37 347 aa15.56■□□□□ 0.08
SHANK1-202ENST00000359082 TRPM6Q9BX84 2022 aa15.56■□□□□ 0.08
SHANK1-202ENST00000359082 UCP3P55916 312 aa15.56■□□□□ 0.08
SHANK1-202ENST00000359082 TMEM14DPA8MWL7 114 aa15.56■□□□□ 0.08
SHANK1-202ENST00000359082 H7C1H1 209 aa15.56■□□□□ 0.08
SHANK1-202ENST00000359082 EIF4EBP2Q13542 120 aaPredicted RBP15.56■□□□□ 0.08
SHANK1-202ENST00000359082 DPRXA6NFQ7 191 aa15.55■□□□□ 0.08
SHANK1-202ENST00000359082 PROB1E7EW31 1015 aa15.55■□□□□ 0.08
SHANK1-202ENST00000359082 TDGF1P13385 188 aa15.55■□□□□ 0.08
SHANK1-202ENST00000359082 PRB3Q04118 309 aaPredicted RBP15.55■□□□□ 0.08
SHANK1-202ENST00000359082 RIPPLY2Q5TAB7 128 aa15.55■□□□□ 0.08
SHANK1-202ENST00000359082 ATAD5Q96QE3 1844 aa15.55■□□□□ 0.08
SHANK1-202ENST00000359082 C14orf144Q96I85 54 aa15.55■□□□□ 0.08
SHANK1-202ENST00000359082 JKAMPQ9P055 326 aa15.55■□□□□ 0.08
SHANK1-202ENST00000359082 COL11A2P13942 1736 aaPredicted RBP15.55■□□□□ 0.08
SHANK1-202ENST00000359082 ZNF708P17019 499 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 EGR4Q05215 589 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 BSPH1Q075Z2 132 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 Q6ZT83 130 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 ARPC1AQ92747 370 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 FMC1Q96HJ9 113 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 ARID1AO14497 2285 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 SMIM10L1P0DMW3 83 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 SMIM10Q96HG1 83 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 IL36BQ9NZH7 164 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 NPIPB4C9JG80 1138 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 TBR1Q16650 682 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 C1QL2Q7Z5L3 287 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 NBEAP1P0C6P0 100 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 FBLIM1Q8WUP2 373 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 CD200R1LQ6Q8B3 271 aa15.54■□□□□ 0.08
SHANK1-202ENST00000359082 PCM1Q15154 2024 aa15.53■□□□□ 0.08
SHANK1-202ENST00000359082 PQLC2LA1A4F0 135 aa15.53■□□□□ 0.08
SHANK1-202ENST00000359082 C17orf98A8MV24 154 aa15.53■□□□□ 0.08
SHANK1-202ENST00000359082 HOXA5P20719 270 aa15.53■□□□□ 0.08
SHANK1-202ENST00000359082 FAM71F2Q6NXP2 309 aa15.53■□□□□ 0.08
SHANK1-202ENST00000359082 ZFC3H1O60293 1989 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms