RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 GLRXP35754 106 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 ARSJQ5FYB0 599 aaPredicted RBP7.08□□□□□ -1.28
RFX3-202ENST00000358730 COA6Q5JTJ3 125 aaKnown RBP7.08□□□□□ -1.28
RFX3-202ENST00000358730 ZNF474Q6S9Z5 364 aaPredicted RBP7.08□□□□□ -1.28
RFX3-202ENST00000358730 RPRMLQ8N4K4 120 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 OR5R1Q8NH85 324 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 HINT2Q9BX68 163 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 PRO1933Q9H354 126 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 NPVFQ9HCQ7 196 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 ENY2Q9NPA8 101 aa7.08□□□□□ -1.28
RFX3-202ENST00000358730 YLPM1P49750 1951 aaKnown RBP7.07□□□□□ -1.28
RFX3-202ENST00000358730 DMXL1Q9Y485 3027 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 TRBV20OR9-2A0A075B6H5 130 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 TRGV10A0A0A0MS01 117 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 KBTBD11-OT1A0A1B0GTJ5 212 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 MDFIC2A0A1B0GVS7 189 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 LHBP01229 141 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 IL6RP08887 468 aaPredicted RBP7.07□□□□□ -1.28
RFX3-202ENST00000358730 HNF1AP20823 631 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 GNG10P50151 68 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 PKIAP61925 76 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 LCN2P80188 198 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 ZADH2Q8N4Q0 377 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 STPG3Q8N7X2 389 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 SFRP2Q96HF1 295 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 RAB9BQ9NP90 201 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 FOXA2Q9Y261 457 aaPredicted RBP7.07□□□□□ -1.28
RFX3-202ENST00000358730 LSM4Q9Y4Z0 139 aaKnown RBP7.07□□□□□ -1.28
RFX3-202ENST00000358730 A0A0U1RQK1 487 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 DVL1O14640 695 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 THBS3P49746 956 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 JOSD1Q15040 202 aaPredicted RBP7.07□□□□□ -1.28
RFX3-202ENST00000358730 PRSS8Q16651 343 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 TEPPQ6URK8 271 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 DEFB108BQ8NET1 73 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 RNASEH2CQ8TDP1 164 aaKnown RBP7.07□□□□□ -1.28
RFX3-202ENST00000358730 TMEM14BQ9NUH8 114 aa7.07□□□□□ -1.28
RFX3-202ENST00000358730 YTHDF2Q9Y5A9 579 aaKnown RBP7.07□□□□□ -1.28
RFX3-202ENST00000358730 TNCP24821 2201 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 ZNF320A2RRD8 509 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 ITGB1BP1O14713 200 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 CA2P00918 260 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 CGB3P0DN86 165 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 CGB7P0DN87 165 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 GZMBP10144 247 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 MYOD1P15172 320 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 PDLIM4P50479 330 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 HSPE1P61604 102 aaKnown RBP7.06□□□□□ -1.28
RFX3-202ENST00000358730 MRPS11P82912 194 aaKnown RBP7.06□□□□□ -1.28
RFX3-202ENST00000358730 EFNB3Q15768 340 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 SPATA31B1PQ5VZV4 182 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.06□□□□□ -1.28
RFX3-202ENST00000358730 C1orf159Q96HA4 380 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 TXNDC17Q9BRA2 123 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 SEPSECSQ9HD40 501 aaKnown RBP7.06□□□□□ -1.28
RFX3-202ENST00000358730 PARD6AQ9NPB6 346 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 IDI2-AS1Q9NZ38 188 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 FAM215AQ9Y5M1 114 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 CEP250Q9BV73 2442 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 IGLV3-9A0A075B6K5 115 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 DDTP30046 118 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 GCHFRP30047 84 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 GPX4P36969 197 aaPredicted RBP7.06□□□□□ -1.28
RFX3-202ENST00000358730 CNN1P51911 297 aaKnown RBP7.06□□□□□ -1.28
RFX3-202ENST00000358730 RHOBP62745 196 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 TNFAIP6P98066 277 aaPredicted RBP7.06□□□□□ -1.28
RFX3-202ENST00000358730 RAB31Q13636 194 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 TCF23Q7RTU1 214 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 TMEM144Q7Z5S9 345 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 LINC00469Q8N7U9 141 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 SGMS2Q8NHU3 365 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 GCM1Q9NP62 436 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 RNF7Q9UBF6 113 aa7.06□□□□□ -1.28
RFX3-202ENST00000358730 MAP1BP46821 2468 aaKnown RBP7.06□□□□□ -1.28
RFX3-202ENST00000358730 IGFBP2P18065 325 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 STUMQ69YW2 141 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 FAM216BQ8N7L0 139 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 C14orf144Q96I85 54 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 ADTRPQ96IZ2 230 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 TP53TG5Q9Y2B4 290 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 OR51B2Q9Y5P1 312 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 TRAPPC1Q9Y5R8 145 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 LAMA5O15230 3695 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 CEACAM4O75871 244 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 COL8A2P25067 703 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 GATA4P43694 442 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 SELENOVP59797 346 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 RPL15P61313 204 aaKnown RBP7.05□□□□□ -1.28
RFX3-202ENST00000358730 RPL31P62899 125 aaKnown RBP7.05□□□□□ -1.28
RFX3-202ENST00000358730 FAM222BQ8WU58 562 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 TMEM18Q96B42 140 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 BTF3L4Q96K17 158 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 GAFA1Q96PS6 74 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 IMMP2LQ96T52 175 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 CCL13Q99616 98 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 NCOR1P1Q9H4R4 102 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 PLEKHA3Q9HB20 300 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 A0A087X0M5 115 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 A0A1B0GX30 115 aa7.05□□□□□ -1.28
RFX3-202ENST00000358730 ZNF705GA8MUZ8 300 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms