RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ZNF439Q8NDP4 499 aa7.4□□□□□ -1.23
UPF2-202ENST00000357604 FLVCR2Q9UPI3 526 aa7.4□□□□□ -1.23
UPF2-202ENST00000357604 TMEM56-RWDD3S4R434 201 aa7.4□□□□□ -1.23
UPF2-202ENST00000357604 FOXI3A8MTJ6 420 aaPredicted RBP7.4□□□□□ -1.23
UPF2-202ENST00000357604 LYZP61626 148 aa7.4□□□□□ -1.23
UPF2-202ENST00000357604 PXDC1Q5TGL8 231 aa7.4□□□□□ -1.23
UPF2-202ENST00000357604 WNT10AQ9GZT5 417 aa7.4□□□□□ -1.23
UPF2-202ENST00000357604 C21orf62Q9NYP8 219 aa7.4□□□□□ -1.23
UPF2-202ENST00000357604 MED12LQ86YW9 2145 aa7.4□□□□□ -1.23
UPF2-202ENST00000357604 TPT1P13693 172 aaKnown RBP7.39□□□□□ -1.23
UPF2-202ENST00000357604 SELENOTP62341 195 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 PRCDQ00LT1 54 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 SPINK9Q5DT21 86 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 GPR146Q96CH1 333 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 GALNT14Q96FL9 552 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 NPIPB5A8MRT5 1133 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 FREM3P0C091 2139 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 GPX4P36969 197 aaPredicted RBP7.39□□□□□ -1.23
UPF2-202ENST00000357604 RHOGP84095 191 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 NR2C2APQ86WQ0 139 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 CIARTQ8N365 385 aaPredicted RBP7.39□□□□□ -1.23
UPF2-202ENST00000357604 MITD1Q8WV92 249 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 GPR82Q96P67 336 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 HSPB1P04792 205 aaKnown RBP7.39□□□□□ -1.23
UPF2-202ENST00000357604 OR1N2Q8NGR9 330 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 CMTM2Q8TAZ6 248 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 UHRF2Q96PU4 802 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 MAGT1Q9H0U3 335 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 APELAP0DMC3 54 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 ZNF137PP52743 207 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 TNFRSF9Q07011 255 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 HCP5Q6MZN7 132 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 TMEM217Q8N7C4 229 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 HYLS1Q96M11 299 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 HIGD1AQ9Y241 93 aa7.39□□□□□ -1.23
UPF2-202ENST00000357604 F6UZH7 168 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 SLC16A13Q7RTY0 426 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 OR4D10Q8NGI6 311 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 VN1R17PQ8TDU5 208 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 IGFBPL1Q8WX77 278 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 C5orf66Q9H5L9 145 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 AAMDCQ9H7C9 122 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 TUBA4BQ9H853 241 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 NCOR2Q9Y618 2525 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 IGKV1D-13A0A0B4J2D9 117 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 CCSO14618 274 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 IGKV1-13P0DP09 117 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 MEOX2P50222 304 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 VKORC1L1Q8N0U8 176 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 PIP4P2Q8N4L2 257 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 BSCL2Q96G97 398 aaPredicted RBP7.38□□□□□ -1.23
UPF2-202ENST00000357604 ZNF430Q9H8G1 570 aaPredicted RBP7.38□□□□□ -1.23
UPF2-202ENST00000357604 MDFIC2A0A1B0GVS7 189 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 NPPCP23582 126 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 LFNGQ8NES3 379 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 OR1P1Q8NH06 330 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 SEC22AQ96IW7 307 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 GGACTQ9BVM4 153 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 C19orf24Q9BVV8 132 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 PEF1Q9UBV8 284 aaKnown RBP7.38□□□□□ -1.23
UPF2-202ENST00000357604 TEX50A0A1B0GTY4 177 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 MYCNOSP40205 109 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 CAMLGP49069 296 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 CX3CL1P78423 397 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 FOXB2Q5VYV0 432 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 LYZL2Q7Z4W2 148 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 BCL6BQ8N143 479 aaPredicted RBP7.38□□□□□ -1.23
UPF2-202ENST00000357604 SMIM8Q96KF7 97 aa7.38□□□□□ -1.23
UPF2-202ENST00000357604 RPL12P30050 165 aaKnown RBP7.37□□□□□ -1.23
UPF2-202ENST00000357604 ATP6V0E1O15342 81 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 IGLV1-47P01700 117 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 HKR1P10072 659 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 OR10J1P30954 320 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 DLK1P80370 383 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 ZNF79Q15937 498 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 C9orf66Q5T8R8 295 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 TEPPQ6URK8 271 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 C5orf56Q8N8D9 126 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 NDFIP1Q9BT67 221 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 SVILO95425 2214 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 COL6A6A6NMZ7 2263 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 SAP30O75446 220 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 SULT1A1P50225 295 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 AKIRIN2Q53H80 203 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 OR2T35Q8NGX2 323 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 CACNG8Q8WXS5 425 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 MFFQ9GZY8 342 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 C16orf95Q9H693 158 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 MPDU1O75352 247 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 LCN12Q6JVE5 192 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 CLEC19AQ6UXS0 136 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 LCNL1Q6ZST4 164 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 OR1B1Q8NGR6 318 aa7.37□□□□□ -1.23
UPF2-202ENST00000357604 RBMXL1Q96E39 390 aaKnown RBP7.37□□□□□ -1.23
UPF2-202ENST00000357604 ACTR3CQ9C0K3 210 aaPredicted RBP7.37□□□□□ -1.23
UPF2-202ENST00000357604 TSPAN15O95858 294 aa7.36□□□□□ -1.23
UPF2-202ENST00000357604 HOXA4Q00056 320 aaPredicted RBP7.36□□□□□ -1.23
UPF2-202ENST00000357604 STXBP6Q8NFX7 210 aa7.36□□□□□ -1.23
UPF2-202ENST00000357604 C4orf3Q8WVX3 66 aa7.36□□□□□ -1.23
UPF2-202ENST00000357604 TP53RKQ96S44 253 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms