RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 A0A1B0GX30 115 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 SPRY2O43597 315 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 ANXA2RQ3ZCQ2 193 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 VMO1Q7Z5L0 202 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 MMD2Q8IY49 270 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 MYO18AQ92614 2054 aaKnown RBP6.17□□□□□ -1.42
VPS13A-202ENST00000357409 ISLRO14498 428 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 MARCH11A6NNE9 402 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 FCN3O75636 299 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 TCF23Q7RTU1 214 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 SEC11CQ9BY50 192 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 RNASE7Q9H1E1 156 aaKnown RBP6.17□□□□□ -1.42
VPS13A-202ENST00000357409 CASP8AP2Q9UKL3 1982 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 TMEM218A2RU14 115 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 HOGA1Q86XE5 327 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 KLHL30-AS1Q8NEE0 82 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 SSBP4Q9BWG4 385 aaPredicted RBP6.17□□□□□ -1.42
VPS13A-202ENST00000357409 MYH9P35579 1960 aaKnown RBP6.17□□□□□ -1.42
VPS13A-202ENST00000357409 TRBV7-9A0A0J9YWB2 115 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 CA1P00915 261 aaPredicted RBP6.17□□□□□ -1.42
VPS13A-202ENST00000357409 GALP22466 123 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 TIMM23BQ5SRD1 257 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 RPUSD1Q9UJJ7 312 aaKnown RBP6.17□□□□□ -1.42
VPS13A-202ENST00000357409 TCF19Q9Y242 345 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 IGLV1-36A0A0B4J1U3 117 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 CFDP00746 253 aaPredicted RBP6.17□□□□□ -1.42
VPS13A-202ENST00000357409 TNFSF10P50591 281 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 TMEM249Q2WGJ8 235 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 PSMG4Q5JS54 123 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 CYP2G1PQ6ZSU1 146 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 RNF144BQ7Z419 303 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 TMEM101Q96IK0 257 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 TIMM23O14925 209 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 LILRA1O75019 489 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 SPATA45Q537H7 98 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 SRSF2Q01130 221 aaKnown RBP6.17□□□□□ -1.42
VPS13A-202ENST00000357409 ZNF385CQ66K41 422 aaPredicted RBP6.17□□□□□ -1.42
VPS13A-202ENST00000357409 PRSS22Q9GZN4 317 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 FAM206AQ9NX38 181 aa6.17□□□□□ -1.42
VPS13A-202ENST00000357409 TNRC6CQ9HCJ0 1690 aaKnown RBP6.17□□□□□ -1.42
VPS13A-202ENST00000357409 PRRC2BQ5JSZ5 2229 aaKnown RBP6.17□□□□□ -1.42
VPS13A-202ENST00000357409 IGKV2-40A0A087WW87 121 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-202ENST00000357409 IGKV2D-40P01614 121 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-202ENST00000357409 ZNF79Q15937 498 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 ASPHD2Q6ICH7 369 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 COL25A1Q9BXS0 654 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-202ENST00000357409 MAP1LC3AQ9H492 121 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 MRPS18AQ9NVS2 196 aaKnown RBP6.16□□□□□ -1.42
VPS13A-202ENST00000357409 ZFP30Q9Y2G7 519 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 AKAP12Q02952 1782 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 A0A0G2JNJ9 132 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 NBEAP1P0C6P0 100 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 SCRT1Q9BWW7 348 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 Q9UFV3 132 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 IGHV2OR16-5A0A0B4J2B6 119 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 C12orf77C9JDV5 145 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 FGF9P31371 208 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-202ENST00000357409 P2RY6Q15077 328 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 C11orf91Q3C1V1 193 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 CHCHD5Q9BSY4 110 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 ZNF319Q9P2F9 582 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 SIAH2O43255 324 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 IRF3Q14653 427 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 ARPC1AQ92747 370 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 CHCHD2Q9Y6H1 151 aaPredicted RBP6.16□□□□□ -1.42
VPS13A-202ENST00000357409 LEPROTL1O95214 131 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 GREM1O60565 184 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 PITX3O75364 302 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 LINC00614P0C842 121 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 C8orf88P0DMB2 117 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 GLRXP35754 106 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 LOXL4Q96JB6 756 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 NAA38Q9BRA0 125 aaKnown RBP6.16□□□□□ -1.42
VPS13A-202ENST00000357409 ZNF581Q9P0T4 197 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 SHROOM3Q8TF72 1996 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 TRAV14DV4A0A0A6YYC5 116 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 TRAV2A0A0B4J234 112 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 RHOGP84095 191 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 Q6ZT83 130 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 MYH14Q7Z406 1995 aaKnown RBP6.16□□□□□ -1.42
VPS13A-202ENST00000357409 C5orf63A6NC05 138 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 ELOBQ15370 118 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 OR5A1Q8NGJ0 315 aa6.16□□□□□ -1.42
VPS13A-202ENST00000357409 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.15□□□□□ -1.42
VPS13A-202ENST00000357409 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-202ENST00000357409 IL6RP08887 468 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-202ENST00000357409 STPG3Q8N7X2 389 aa6.15□□□□□ -1.42
VPS13A-202ENST00000357409 PEX7O00628 323 aa6.15□□□□□ -1.42
VPS13A-202ENST00000357409 TNFRSF9Q07011 255 aa6.15□□□□□ -1.42
VPS13A-202ENST00000357409 ERCC8Q13216 396 aa6.15□□□□□ -1.42
VPS13A-202ENST00000357409 FAM162BQ5T6X4 162 aa6.15□□□□□ -1.42
VPS13A-202ENST00000357409 ACP7Q6ZNF0 438 aa6.15□□□□□ -1.42
VPS13A-202ENST00000357409 STPG2Q8N412 459 aa6.15□□□□□ -1.42
VPS13A-202ENST00000357409 ZNF430Q9H8G1 570 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-202ENST00000357409 COL4A5P29400 1685 aa6.15□□□□□ -1.42
VPS13A-202ENST00000357409 PRB2P02812 416 aaPredicted RBP6.15□□□□□ -1.43
VPS13A-202ENST00000357409 CBLN1P23435 193 aa6.15□□□□□ -1.43
VPS13A-202ENST00000357409 IFITM3Q01628 133 aa6.15□□□□□ -1.43
VPS13A-202ENST00000357409 IMMP1LQ96LU5 166 aa6.15□□□□□ -1.43
VPS13A-202ENST00000357409 MANBALQ9NQG1 85 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms