RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 LDLRAD4O15165 306 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 CEACAM4O75871 244 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 SSBP2P81877 361 aaPredicted RBP10.95□□□□□ -0.66
SMC4-202ENST00000357388 S100A7L2Q5SY68 101 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 TMEM242Q9NWH2 141 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 PAPPAQ13219 1627 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 HBDP02042 147 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 C1QL4Q86Z23 238 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 OR9G1Q8NH87 305 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 GDF15Q99988 308 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 G6PC2Q9NQR9 355 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 A0A0J9YW62 118 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 PPBPP02775 128 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 NBEAP1P0C6P0 100 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 SPANXDQ9BXN6 97 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 GNB1LQ9BYB4 327 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 LAMA4Q16363 1823 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 IGHV1-45A0A0A0MS14 117 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 TRAV24A0A0B4J272 114 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 PPIAL4CA0A0B4J2A2 164 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 PPIAL4GP0DN37 164 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 ERVK11-1P61568 191 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 RPL23P62829 140 aaKnown RBP10.94□□□□□ -0.66
SMC4-202ENST00000357388 SAMD5Q5TGI4 173 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 FAM74A4Q5TZK3 123 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 IFI27L2Q9H2X8 130 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 OSTCQ9NRP0 149 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 SLX4Q8IY92 1834 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 LOC105371242A0A075B767 164 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 IGKV3D-15A0A087WSY6 115 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 NKX2-8O15522 239 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 SNAI2O43623 268 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 IGKV3-15P01624 115 aa10.94□□□□□ -0.66
SMC4-202ENST00000357388 NXT2Q9NPJ8 142 aaKnown RBP10.94□□□□□ -0.66
SMC4-202ENST00000357388 TGIF1Q15583 401 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 TEX45Q8NA69 505 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 OR5AN1Q8NGI8 311 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 CACNA1CQ13936 2221 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 NPIPB13A6NJU9 1138 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 CGB1A6NKQ9 187 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 WDR82Q6UXN9 313 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 PLPPR1Q8TBJ4 325 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
SMC4-202ENST00000357388 NPIPB3Q92617 1050 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 FOXI3A8MTJ6 420 aaPredicted RBP10.93□□□□□ -0.66
SMC4-202ENST00000357388 FER1L6-AS1Q8NA97 138 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 RREB1Q92766 1687 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 SPINT1O43278 529 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 SNRPCP09234 159 aaKnown RBP10.93□□□□□ -0.66
SMC4-202ENST00000357388 SPINK2P20155 84 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 PLNP26678 52 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 SLC25A53Q5H9E4 307 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 DRAM1Q8N682 238 aa10.93□□□□□ -0.66
SMC4-202ENST00000357388 SCO2A0A1W2PP80 73 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 ADMP35318 185 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 LEPP41159 167 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 CCL20P78556 96 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 SRSF4Q08170 494 aaKnown RBP10.92□□□□□ -0.66
SMC4-202ENST00000357388 CACNG8Q8WXS5 425 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 TMEM74BQ9NUR3 256 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 A0A1B0GUL6 1792 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 B9A039 149 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 ABHD12Q8N2K0 398 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 RNF182Q8N6D2 247 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 BTAF1O14981 1849 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 LAMB1P07942 1786 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 FOXS1O43638 330 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 NDUFA3O95167 84 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 UCP1P25874 307 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 ICAM4Q14773 271 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 TM2D1Q9BX74 207 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 NPFFR1Q9GZQ6 430 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 TPRP12270 2363 aaKnown RBP10.92□□□□□ -0.66
SMC4-202ENST00000357388 ATP5L2Q7Z4Y8 100 aa10.92□□□□□ -0.66
SMC4-202ENST00000357388 PHLDA1Q8WV24 401 aaPredicted RBP10.92□□□□□ -0.66
SMC4-202ENST00000357388 HRKO00198 91 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 OSR1Q8TAX0 266 aaPredicted RBP10.91□□□□□ -0.66
SMC4-202ENST00000357388 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.91□□□□□ -0.66
SMC4-202ENST00000357388 RNF222A6NCQ9 220 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 HIST1H2BKO60814 126 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 IGKV1D-16P01601 117 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 IGHV4-39P01824 125 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 HIST1H2BJP06899 126 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 HIST1H2BOP23527 126 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 HIST1H2BBP33778 126 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 HIST1H2BDP58876 126 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 HIST1H2BCP62807 126 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 SRSF1Q07955 248 aaKnown RBP eCLIP10.91□□□□□ -0.669e-8■■□□□ 13.7
SMC4-202ENST00000357388 HIST2H2BEQ16778 126 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 ORMDL2Q53FV1 153 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.91□□□□□ -0.66
SMC4-202ENST00000357388 FAM19A2Q8N3H0 131 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 HIST1H2BHQ93079 126 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 HIST1H2BNQ99877 126 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 HIST1H2BMQ99879 126 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 DNAJC13O75165 2243 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 KBTBD11-OT1A0A1B0GTJ5 212 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 CGAP01215 116 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 CFAP161Q6P656 301 aa10.91□□□□□ -0.66
SMC4-202ENST00000357388 EAF1Q96JC9 268 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms