RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 VENTXO95231 258 aa6.9□□□□□ -1.31
CDC42SE1-201ENST00000357235 SLC25A6P12236 298 aa6.9□□□□□ -1.31
CDC42SE1-201ENST00000357235 AMTP48728 403 aa6.9□□□□□ -1.31
CDC42SE1-201ENST00000357235 YPEL3P61236 119 aaPredicted RBP6.9□□□□□ -1.31
CDC42SE1-201ENST00000357235 H2BFWTQ7Z2G1 175 aa6.9□□□□□ -1.31
CDC42SE1-201ENST00000357235 POM121L2Q96KW2 1035 aa6.9□□□□□ -1.31
CDC42SE1-201ENST00000357235 TMEM147Q9BVK8 224 aa6.9□□□□□ -1.31
CDC42SE1-201ENST00000357235 NPCDR1Q9BY65 106 aa6.9□□□□□ -1.31
CDC42SE1-201ENST00000357235 ICE1Q9Y2F5 2266 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 NCKAP5O14513 1909 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 PIGBOS1A0A0B4J2F0 54 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 C17orf98A8MV24 154 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 LHX2P50458 406 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 FOXL1Q12952 345 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 SRSF7Q16629 238 aaKnown RBP eCLIP6.89□□□□□ -1.316e-6■■■□□ 15.5
CDC42SE1-201ENST00000357235 ZNF826PQ6ZT77 177 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 MUC15Q8N387 334 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 FAM216AQ8WUB2 273 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 BOKQ9UMX3 212 aaPredicted RBP6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 G3V4G9 280 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 WNT9BO14905 357 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 TAX1BP3O14907 124 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 SPINK4O60575 86 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 TNFSF15O95150 251 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 NPPCP23582 126 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 COL8A2P25067 703 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 ALKBH6Q3KRA9 238 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 PPP1R32Q7Z5V6 425 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 ATOH7Q8N100 152 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 SCCPDHQ8NBX0 429 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 SARAFQ96BY9 339 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 GALMQ96C23 342 aa6.89□□□□□ -1.31
CDC42SE1-201ENST00000357235 DSPP15924 2871 aaKnown RBP6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 RP1L1Q8IWN7 2480 aaPredicted RBP6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 LRRC30A6NM36 301 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 RAB29O14966 203 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 PSPNO60542 156 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 CBLN1P23435 193 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 GFRA1P56159 465 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 EDDM3AQ14507 147 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 RNPS1Q15287 305 aaKnown RBP6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 TMEM14EPQ6UXP3 125 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 FER1L6-AS1Q8NA97 138 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 ZNF114Q8NC26 417 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 ST6GALNAC3Q8NDV1 305 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 OR4F17Q8NGA8 305 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 UHRF2Q96PU4 802 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 LRFN3Q9BTN0 628 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 MRPL18Q9H0U6 180 aaKnown RBP6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 OBP2BQ9NPH6 170 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 SIT1Q9Y3P8 196 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 F2Z2F3 143 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 J3QT63 122 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 K7ESF4 209 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 CELA3BP08861 270 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 WNT2P09544 360 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 PMCHP20382 165 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 ADAMTS20P59510 1910 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 ABHD17BQ5VST6 288 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 STUMQ69YW2 141 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 TCF24Q7RTU0 167 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 MDP1Q86V88 176 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 VKORC1L1Q8N0U8 176 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 OR1N2Q8NGR9 330 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 CEP192Q8TEP8 1941 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 RTL8AQ9BWD3 113 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 FZR1Q9UM11 496 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 WASHC3Q9Y3C0 194 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 MPC1Q9Y5U8 109 aa6.88□□□□□ -1.31
CDC42SE1-201ENST00000357235 MDFIC2A0A1B0GVS7 189 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 MT-CO2P00403 227 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 STAG3L3P0CL85 134 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 KITLGP21583 273 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 SSTR5P35346 364 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 PRRX1P54821 245 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 GNB1P62873 340 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 Q0VG73 95 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 CATR1Q13166 79 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 ACSF3Q4G176 576 aaPredicted RBP6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 PDLIM3Q53GG5 364 aaPredicted RBP6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 MPV17L2Q567V2 206 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 Q6P435 159 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 ZNF497Q6ZNH5 498 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 OR10W1Q8NGF6 305 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 SSMEM1Q8WWF3 244 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 PLSCR4Q9NRQ2 329 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 B4GALT7Q9UBV7 327 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 SMPXQ9UHP9 88 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 PSG11Q9UQ72 335 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 C12orf77C9JDV5 145 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 C17orf112F2Z3M2 114 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 C3orf79P0CE67 100 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 MC5RP33032 325 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 ARG2P78540 354 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 PSG9Q00887 426 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 PMCHL1Q16048 86 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 WDR86Q86TI4 376 aa6.87□□□□□ -1.31
CDC42SE1-201ENST00000357235 ZNF48Q96MX3 618 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms