RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 ASCL2Q99929 193 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 FOXD3Q9UJU5 478 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-202ENST00000357162 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-202ENST00000357162 A0A0U1RQS6 177 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 COLCA2A8K830 154 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 RNFT1Q5M7Z0 435 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 DTX1Q86Y01 620 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 TMEM186Q96B77 213 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 GPA33Q99795 319 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 PRSS27Q9BQR3 290 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 LOC107984156A0A0G2JMH3 177 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 ARL17AQ8IVW1 177 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 PHF7Q9BWX1 381 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-202ENST00000357162 FSCN3Q9NQT6 498 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 ZNF205O95201 554 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 ZNF703Q9H7S9 590 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-202ENST00000357162 SIT1Q9Y3P8 196 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 TMEFF1Q8IYR6 380 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 F2Z2F3 143 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 GAB4Q2WGN9 574 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 OR8B2Q96RD0 313 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 KLK2P20151 261 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 BADQ92934 168 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 NRN1Q9NPD7 142 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 ADIPOQQ15848 244 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 LAIR2Q6ISS4 152 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 DLX4Q92988 240 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-202ENST00000357162 CCL28Q9NRJ3 127 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 NRXN2Q9P2S2 1712 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 REG1AP05451 166 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 HES3Q5TGS1 186 aa5.64□□□□□ -1.51
VPS13B-202ENST00000357162 TRBV20-1A0A075B6N2 111 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 MPV17P39210 176 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 ANAPC13Q9BS18 74 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 TMEM229AB2RXF0 380 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 CA6P23280 308 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 PRDX2P32119 198 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 ERVK11-1P61568 191 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 GNB1P62873 340 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 SLC25A47Q6Q0C1 308 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 FAM89BQ8N5H3 189 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 LOXL2Q9Y4K0 774 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 BTCP35070 178 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 TBR1Q16650 682 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 SHISA6Q6ZSJ9 500 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 MOB3BQ86TA1 216 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 SDF2L1Q9HCN8 221 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 PHLDA3Q9Y5J5 127 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 DLEU1O43261 78 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 CENPWQ5EE01 88 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 LINC01590Q5TEZ4 76 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 C12orf49Q9H741 205 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 TMEM8BA6NDV4 472 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 KRTCAP3Q53RY4 240 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 LINC00114Q6XXX2 140 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 UBTD1Q9HAC8 227 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 TCF19Q9Y242 345 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 CYSLTR1Q9Y271 337 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 GCN1Q92616 2671 aaKnown RBP5.63□□□□□ -1.51
VPS13B-202ENST00000357162 PSG2P11465 335 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 TNFAIP6P98066 277 aaPredicted RBP5.63□□□□□ -1.51
VPS13B-202ENST00000357162 ZNF714Q96N38 554 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 RNF7Q9UBF6 113 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 IGFBP3P17936 291 aaPredicted RBP5.63□□□□□ -1.51
VPS13B-202ENST00000357162 RND2P52198 227 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 GNB2P62879 340 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 ORMDL2Q53FV1 153 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS13B-202ENST00000357162 A0A096LPE4 126 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 A0A1W2PPZ6 126 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 HINT1P49773 126 aaPredicted RBP5.63□□□□□ -1.51
VPS13B-202ENST00000357162 C19orf54Q5BKX5 351 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 POU2AF1Q16633 256 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 OR4D11Q8NGI4 311 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 TMEM140Q9NV12 185 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 FHL5Q5TD97 284 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 ELOVL5Q9NYP7 299 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 TMEM238C9JI98 176 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 CDAP32320 146 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 ICAM4Q14773 271 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 ZNF721Q8TF20 911 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 MBD1Q9UIS9 605 aaPredicted RBP5.63□□□□□ -1.51
VPS13B-202ENST00000357162 LHFPL6Q9Y693 200 aa5.63□□□□□ -1.51
VPS13B-202ENST00000357162 IGLV3-32A0A0A0MS00 114 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 NXPH3O95157 252 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 RPS27P42677 84 aaKnown RBP5.62□□□□□ -1.51
VPS13B-202ENST00000357162 LTC4SQ16873 150 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 CBLN3Q6UW01 205 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 C12orf76Q8N812 135 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-202ENST00000357162 TRBV6-6A0A0A6YYG2 114 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 PEX7O00628 323 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 TMEM144Q7Z5S9 345 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 SPATA31B1PQ5VZV4 182 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 DRAM1Q8N682 238 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 PGPEP1LA6NFU8 196 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 CSN3P07498 182 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 RAXQ9Y2V3 346 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 TANC1Q9C0D5 1861 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 C1QL1O75973 258 aa5.62□□□□□ -1.51
VPS13B-202ENST00000357162 GAGE2BQ13066 116 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms