RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 RNASE6Q93091 150 aaKnown RBP4.71□□□□□ -1.66
PTPRD-202ENST00000356435 C21orf62Q9NYP8 219 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 NUP205Q92621 2012 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 ZNFX1Q9P2E3 1918 aaKnown RBP4.71□□□□□ -1.66
PTPRD-202ENST00000356435 TRGV11A0A075B6L2 103 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 HOXA3O43365 443 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-202ENST00000356435 LEPROTL1O95214 131 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 PMCHL1Q16048 86 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 C10orf91Q5T1B1 145 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 PPP1R32Q7Z5V6 425 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 CYB561D1Q8N8Q1 229 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 FMC1Q96HJ9 113 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 PMCHL2Q9BQD1 86 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 C11orf68Q9H3H3 251 aaKnown RBP4.71□□□□□ -1.66
PTPRD-202ENST00000356435 EPOPA6NHQ4 379 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 NPIPB7O75200 414 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 THBDP07204 575 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 PKIAP61925 76 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 ACP7Q6ZNF0 438 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 F5P12259 2224 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 FBLL1A6NHQ2 334 aaKnown RBP4.71□□□□□ -1.66
PTPRD-202ENST00000356435 IGF2P01344 180 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 IGHV3-23P01764 117 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 SNRPCP09234 159 aaKnown RBP4.71□□□□□ -1.66
PTPRD-202ENST00000356435 SCTP09683 121 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 SLC25A38Q96DW6 304 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 BEX4Q9NWD9 120 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-202ENST00000356435 OTOFQ9HC10 1997 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 C7orf77A4D0Y5 90 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 CSRP1P21291 193 aaKnown RBP4.71□□□□□ -1.66
PTPRD-202ENST00000356435 HBBP68871 147 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 DTX1Q86Y01 620 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 LEAP2Q969E1 77 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 GSN-AS1Q9NRJ2 163 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 LOC102724200A0A096LPH7 203 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-202ENST00000356435 C19orf67A6NJJ6 358 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 OR11H12B2RN74 326 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 LILRA1O75019 489 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 DUSP14O95147 198 aaKnown RBP4.71□□□□□ -1.66
PTPRD-202ENST00000356435 STAG3L3P0CL85 134 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 GLRXP35754 106 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 LINC00305Q7Z4B0 112 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 NR2C2APQ86WQ0 139 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 OR11H1Q8NG94 326 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 OR4D11Q8NGI4 311 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 OR11H2Q8NH07 326 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 RGP1Q92546 391 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-202ENST00000356435 HIST1H2BAQ96A08 127 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 PLSCR2Q9NRY7 297 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 PIKFYVEQ9Y2I7 2098 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 CXorf65A6NEN9 183 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 AGAP20933 346 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 GPR183P32249 361 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 NCMAPQ5T1S8 102 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 LEMD1Q68G75 181 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 TCF23Q7RTU1 214 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 TEX45Q8NA69 505 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 KCNS1Q96KK3 526 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 IGHV2OR16-5A0A0B4J2B6 119 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 TRBV7-9A0A0J9YWB2 115 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 MOSPD3O75425 235 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 RUNX1Q01196 453 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 PARP14Q460N5 1801 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 UBR3Q6ZT12 1888 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 IGHV3OR16-13A0A075B7E8 117 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 A0A087X0M5 115 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 LOC102723996A0A087X1L8 192 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 IGHV3-74A0A0B4J1X5 117 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 TRBV5-5A0A0J9YX44 114 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 A0A1B0GX30 115 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 K7ERU9 68 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 HSPB1P04792 205 aaKnown RBP4.7□□□□□ -1.66
PTPRD-202ENST00000356435 GLIPR1P48060 266 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 UBE2V2Q15819 145 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 FDCSPQ8NFU4 85 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 C8orf46Q8TAG6 207 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 SLC25A28Q96A46 364 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 COL4A4P53420 1690 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-202ENST00000356435 NUP214P35658 2090 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-202ENST00000356435 TRAV24A0A0B4J272 114 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 H3BTX0 84 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 EIF3GO75821 320 aaKnown RBP eCLIP4.7□□□□□ -1.66
PTPRD-202ENST00000356435 H2BFSP57053 126 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 SLC25A34Q6PIV7 304 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 CLEC19AQ6UXS0 136 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 TAF15Q92804 592 aaKnown RBP eCLIP4.7□□□□□ -1.66
PTPRD-202ENST00000356435 SPSB4Q96A44 273 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 FAM131CQ96AQ9 280 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 LHFPL6Q9Y693 200 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 NPIPB4C9JG80 1138 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 M0R381 172 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 ZNF708P17019 499 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 TMEM170BQ5T4T1 132 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 CYP2G1PQ6ZSU1 146 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 FGFRL1Q8N441 504 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 FOXA2Q9Y261 457 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-202ENST00000356435 PAM16Q9Y3D7 125 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 LINC00312Q9Y6C7 94 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 IGHV3-66A0A0C4DH42 116 aa4.7□□□□□ -1.66
PTPRD-202ENST00000356435 LOC390937A0A1W2PQ73 354 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms