RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 MYOZ3Q8TDC0 251 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 R3HDM4Q96D70 268 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 RBMXL1Q96E39 390 aaKnown RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 OR2A7Q96R45 310 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 CLCC1Q96S66 551 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 CITED2Q99967 270 aaPredicted RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 C7orf50Q9BRJ6 194 aaKnown RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 AKIP1Q9NQ31 210 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 COPZ2Q9P299 210 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 NAP1L6A6NFF2 107 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 LINC01548A6NM66 108 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 FCN1O00602 326 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 MPPED1O15442 326 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 RAMP3O60896 148 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 CNIH1O95406 144 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 BRI3O95415 125 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 EGR2P11161 476 aaPredicted RBP3.1□□□□□ -1.91
CNOT4-202ENST00000356162 RPA2P15927 270 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 PPIFP30405 207 aaKnown RBP3.1□□□□□ -1.91
CNOT4-202ENST00000356162 RPL27AP46776 148 aaKnown RBP3.1□□□□□ -1.91
CNOT4-202ENST00000356162 INPP1P49441 399 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 PIGPP57054 158 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 GNB1P62873 340 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 TNXAQ16473 311 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 TCTEX1D4Q5JR98 221 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 KHDC1LQ5JSQ8 128 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 FAAP20Q6NZ36 180 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 UNQ5815/PRO19632Q6UWF5 114 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 C10orf99Q6UWK7 81 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 IDO2Q6ZQW0 420 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 MINDY2Q8NBR6 621 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 OR4F17Q8NGA8 305 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 OR51S1Q8NGJ8 323 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 FAM110DQ8TAY7 271 aaPredicted RBP3.1□□□□□ -1.91
CNOT4-202ENST00000356162 MARCH1Q8TCQ1 289 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 SRSF12Q8WXF0 261 aaKnown RBP3.1□□□□□ -1.91
CNOT4-202ENST00000356162 S100ZQ8WXG8 99 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 MRGPRFQ96AM1 343 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 OR4F4Q96R69 305 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 GPHA2Q96T91 129 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 SRSF8Q9BRL6 282 aaKnown RBP3.1□□□□□ -1.91
CNOT4-202ENST00000356162 CCDC32Q9BV29 185 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 ZNF430Q9H8G1 570 aaPredicted RBP3.1□□□□□ -1.91
CNOT4-202ENST00000356162 HRASLSQ9HDD0 168 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 TMEM140Q9NV12 185 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 LINC00527Q9UJ94 153 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 FBXO7Q9Y3I1 522 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 NUBP2Q9Y5Y2 271 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 CMYA5Q8N3K9 4069 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 A0A1W2PN81 502 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 CRYM-AS1A6NIL9 109 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 MARCH11A6NNE9 402 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 G3V318 75 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 UPK2O00526 184 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 ACTL6BO94805 426 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 ATG12O94817 140 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 HLA-GP17693 338 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 PI3P19957 117 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 UCP1P25874 307 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 PSMB8P28062 276 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 CHRNA7P36544 502 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 LPAR6P43657 344 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 RPL8P62917 257 aaKnown RBP3.1□□□□□ -1.91
CNOT4-202ENST00000356162 DHODHQ02127 395 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 NSUN5P1Q3KNT7 163 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 ZNF585BQ52M93 769 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 AKIRIN2Q53H80 203 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 ZNF57Q68EA5 555 aaPredicted RBP3.1□□□□□ -1.91
CNOT4-202ENST00000356162 OR4A47Q6IF82 309 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 ZNF329Q86UD4 541 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 SLC25A42Q86VD7 318 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 C11orf44Q8N8P7 122 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 DMBX1Q8NFW5 382 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 TSC22D3Q99576 134 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 PHB2Q99623 299 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 SDHCQ99643 169 aaPredicted RBP3.1□□□□□ -1.91
CNOT4-202ENST00000356162 SPIN2AQ99865 258 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 SPIN2BQ9BPZ2 258 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 WDR12Q9GZL7 423 aaKnown RBP3.1□□□□□ -1.91
CNOT4-202ENST00000356162 NAA60Q9H7X0 242 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 MCUBQ9NWR8 336 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 GPR132Q9UNW8 380 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 WSB1Q9Y6I7 421 aa3.1□□□□□ -1.91
CNOT4-202ENST00000356162 PIGBOS1A0A0B4J2F0 54 aa3.09□□□□□ -1.91
CNOT4-202ENST00000356162 NUDT19A8MXV4 375 aa3.09□□□□□ -1.91
CNOT4-202ENST00000356162 SERPINE2P07093 398 aa3.09□□□□□ -1.91
CNOT4-202ENST00000356162 IL6RP08887 468 aaPredicted RBP3.09□□□□□ -1.91
CNOT4-202ENST00000356162 OR9G9P0C7N8 305 aa3.09□□□□□ -1.91
CNOT4-202ENST00000356162 PF4V1P10720 104 aa3.09□□□□□ -1.91
CNOT4-202ENST00000356162 IL7P13232 177 aa3.09□□□□□ -1.91
CNOT4-202ENST00000356162 RUNX1Q01196 453 aa3.09□□□□□ -1.91
CNOT4-202ENST00000356162 PJVKQ0ZLH3 352 aa3.09□□□□□ -1.91
CNOT4-202ENST00000356162 ASPHD1Q5U4P2 390 aa3.09□□□□□ -1.91
CNOT4-202ENST00000356162 SSX9Q7RTT3 188 aa3.09□□□□□ -1.91
CNOT4-202ENST00000356162 KLHL30-AS1Q8NEE0 82 aa3.09□□□□□ -1.91
CNOT4-202ENST00000356162 C4orf3Q8WVX3 66 aa3.09□□□□□ -1.91
CNOT4-202ENST00000356162 IL22RA2Q969J5 263 aa3.09□□□□□ -1.91
CNOT4-202ENST00000356162 SLC25A21Q9BQT8 299 aaPredicted RBP3.09□□□□□ -1.91
CNOT4-202ENST00000356162 FAM103A1Q9BTL3 118 aaKnown RBP3.09□□□□□ -1.91
CNOT4-202ENST00000356162 C5orf66Q9H5L9 145 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms