RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 VWC2Q2TAL6 325 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 MIR17HGQ75NE6 70 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 FAM173AQ9BQD7 235 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 GP6Q9HCN6 339 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 SERTAD4Q9NUC0 356 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 DCAF16Q9NXF7 216 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 IL36BQ9NZH7 164 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 TP73-AS1Q9UF72 201 aa8.4□□□□□ -1.06
PTPRA-203ENST00000356147 OOEPA6NGQ2 149 aa8.4□□□□□ -1.07
PTPRA-203ENST00000356147 GCHFRP30047 84 aa8.4□□□□□ -1.07
PTPRA-203ENST00000356147 GPR12P47775 334 aa8.4□□□□□ -1.07
PTPRA-203ENST00000356147 TRIP6Q15654 476 aaKnown RBP8.4□□□□□ -1.07
PTPRA-203ENST00000356147 PQLC2Q6ZP29 291 aa8.4□□□□□ -1.07
PTPRA-203ENST00000356147 BCL2L2Q92843 193 aaPredicted RBP8.4□□□□□ -1.07
PTPRA-203ENST00000356147 C1orf159Q96HA4 380 aa8.4□□□□□ -1.07
PTPRA-203ENST00000356147 FOXJ2Q9P0K8 574 aa8.4□□□□□ -1.07
PTPRA-203ENST00000356147 IGHV3OR15-7A0A075B7D8 119 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 NTN3O00634 580 aaPredicted RBP8.39□□□□□ -1.07
PTPRA-203ENST00000356147 WISP2O76076 250 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 IL6RP08887 468 aaPredicted RBP8.39□□□□□ -1.07
PTPRA-203ENST00000356147 MGST1P10620 155 aaKnown RBP8.39□□□□□ -1.07
PTPRA-203ENST00000356147 CD99P14209 185 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 PCP4P48539 62 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 UBE2NP61088 152 aaKnown RBP8.39□□□□□ -1.07
PTPRA-203ENST00000356147 MRPS11P82912 194 aaKnown RBP8.39□□□□□ -1.07
PTPRA-203ENST00000356147 EFNB3Q15768 340 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 SPATA45Q537H7 98 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 DCAF12Q5T6F0 453 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 STPG3Q8N7X2 389 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 STPG4Q8N801 248 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 SPOCK3Q9BQ16 436 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 SSBP3Q9BWW4 388 aaPredicted RBP8.39□□□□□ -1.07
PTPRA-203ENST00000356147 OPN3Q9H1Y3 402 aaPredicted RBP8.39□□□□□ -1.07
PTPRA-203ENST00000356147 DNAJC4Q9NNZ3 241 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 B4GALT7Q9UBV7 327 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 CXorf1O96002 111 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 IGFBP2P18065 325 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 CHRNB4P30926 498 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 RAB7AP51149 207 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 CENPWQ5EE01 88 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 KLF14Q8TD94 323 aaPredicted RBP8.39□□□□□ -1.07
PTPRA-203ENST00000356147 EAF1Q96JC9 268 aaPredicted RBP8.39□□□□□ -1.07
PTPRA-203ENST00000356147 TAAR6Q96RI8 345 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 C20orf144Q9BQM9 153 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 NRN1Q9NPD7 142 aa8.39□□□□□ -1.07
PTPRA-203ENST00000356147 MRPS18CQ9Y3D5 142 aaKnown RBP8.39□□□□□ -1.07
PTPRA-203ENST00000356147 CACNA1GO43497 2377 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 ZNF253O75346 499 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 CYC1P08574 325 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 SFTPCP11686 197 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 LGALS4P56470 323 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 PSG5Q15238 335 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 MLANAQ16655 118 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 ZNF718Q3SXZ3 478 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 ATP1A1-AS1Q5TC04 95 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 FBXW9Q5XUX1 488 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 C6orf15Q6UXA7 325 aaPredicted RBP8.38□□□□□ -1.07
PTPRA-203ENST00000356147 C1orf229Q6ZS94 237 aaPredicted RBP8.38□□□□□ -1.07
PTPRA-203ENST00000356147 C11orf53Q8IXP5 236 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 HSD17B10Q99714 261 aaKnown RBP8.38□□□□□ -1.07
PTPRA-203ENST00000356147 TXN2Q99757 166 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 GFRA3O60609 400 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 SRIP30626 198 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 DUTP33316 252 aaKnown RBP8.38□□□□□ -1.07
PTPRA-203ENST00000356147 ZNF134P52741 427 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 SELENOTP62341 195 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 PAFAH1B2P68402 229 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 ZNF766Q5HY98 468 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 PMS2CLQ68D20 193 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 Q6ZN92 141 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 Q8IYB0 196 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 LINC00479Q96M42 142 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 DMXL2Q8TDJ6 3036 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 GPX1P07203 203 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 HINT1P49773 126 aaPredicted RBP8.38□□□□□ -1.07
PTPRA-203ENST00000356147 RANP62826 216 aaKnown RBP8.38□□□□□ -1.07
PTPRA-203ENST00000356147 RPEL1Q2QD12 228 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 Q8N976 141 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 STARD4Q96DR4 205 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 V9GYV3 84 aa8.38□□□□□ -1.07
PTPRA-203ENST00000356147 M0QZK8 103 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 OPRK1P41145 380 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 MEOX1P50221 254 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 SUMO1P63165 101 aaKnown RBP8.37□□□□□ -1.07
PTPRA-203ENST00000356147 SSPNQ14714 243 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 ZBTB34Q8NCN2 500 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 TMEM140Q9NV12 185 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 PCNX2A6NKB5 2137 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 OR7C2O60412 319 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 GNG4P50150 75 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 ZNF83P51522 516 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 RNFT1Q5M7Z0 435 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 FAM201AQ5SY85 155 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 WDR82Q6UXN9 313 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 ACP7Q6ZNF0 438 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 CD177Q8N6Q3 437 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 ZNRF1Q8ND25 227 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 SGK494Q96LW2 274 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 ZNF586Q9NXT0 402 aa8.37□□□□□ -1.07
PTPRA-203ENST00000356147 ZNRD1Q9P1U0 126 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms