RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 PSMB11A5LHX3 300 aa11.18□□□□□ -0.62
SCN8A-202ENST00000355133 RBFOX2O43251 390 aaKnown RBP eCLIP11.18□□□□□ -0.62
SCN8A-202ENST00000355133 NEU4Q8WWR8 484 aaPredicted RBP11.18□□□□□ -0.62
SCN8A-202ENST00000355133 C7orf69Q9H7B7 122 aa11.18□□□□□ -0.62
SCN8A-202ENST00000355133 F11RQ9Y624 299 aaKnown RBP11.18□□□□□ -0.62
SCN8A-202ENST00000355133 ASXL3Q9C0F0 2248 aa11.18□□□□□ -0.62
SCN8A-202ENST00000355133 WFIKKN1Q96NZ8 548 aa11.18□□□□□ -0.62
SCN8A-202ENST00000355133 CEACAM4O75871 244 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 TGFAP01135 160 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 CD69Q07108 199 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 LHFPL5Q8TAF8 219 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 C19orf24Q9BVV8 132 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 C17orf98A8MV24 154 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 UMODP07911 640 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 PSG7Q13046 419 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 TCF24Q7RTU0 167 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 PPP1R27Q86WC6 154 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 TRBV20OR9-2A0A075B6H5 130 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 OR4A47Q6IF82 309 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 OR11H4Q8NGC9 324 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 DANCRP0C864 163 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 CENPWQ5EE01 88 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 WDYHV1Q96HA8 205 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 GEMIN7Q9H840 131 aaKnown RBP11.17□□□□□ -0.62
SCN8A-202ENST00000355133 TCF21O43680 179 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 EFEMP2O95967 443 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 GPR183P32249 361 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 OR4D5Q8NGN0 318 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 CLDND2Q8NHS1 167 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 YAE1D1Q9NRH1 226 aa11.17□□□□□ -0.62
SCN8A-202ENST00000355133 SFRP2Q96HF1 295 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 KIR2DL4Q99706 377 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 MRPL20Q9BYC9 149 aaKnown RBP11.16□□□□□ -0.62
SCN8A-202ENST00000355133 IFI27L2Q9H2X8 130 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 GRIFINA4D1Z8 144 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 CLEC19AQ6UXS0 136 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 IGFBP2P18065 325 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 IMMP1LQ96LU5 166 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 KIF13BQ9NQT8 1826 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 MUC21A0A0G2JKD1 596 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 MUC21A0A140T8X8 626 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 GCSAMLQ5JQS6 135 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 MUC21Q5SSG8 566 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 LAIR2Q6ISS4 152 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 OR10S1Q8NGN2 331 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 GATAD1Q8WUU5 269 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 AICDAQ9GZX7 198 aa11.16□□□□□ -0.62
SCN8A-202ENST00000355133 KBTBD11-OT1A0A1B0GTJ5 212 aa11.15□□□□□ -0.62
SCN8A-202ENST00000355133 M0R381 172 aa11.15□□□□□ -0.62
SCN8A-202ENST00000355133 CSRP3P50461 194 aa11.15□□□□□ -0.62
SCN8A-202ENST00000355133 C2orf68Q2NKX9 166 aa11.15□□□□□ -0.62
SCN8A-202ENST00000355133 C1orf162Q8NEQ5 155 aaPredicted RBP11.15□□□□□ -0.62
SCN8A-202ENST00000355133 OSR1Q8TAX0 266 aaPredicted RBP11.15□□□□□ -0.62
SCN8A-202ENST00000355133 SCN4AP35499 1836 aa11.15□□□□□ -0.62
SCN8A-202ENST00000355133 CKAP5Q14008 2032 aa11.15□□□□□ -0.62
SCN8A-202ENST00000355133 TM4SF5O14894 197 aa11.15□□□□□ -0.62
SCN8A-202ENST00000355133 IGHV3-11P01762 117 aa11.15□□□□□ -0.62
SCN8A-202ENST00000355133 TFF3Q07654 80 aa11.15□□□□□ -0.62
SCN8A-202ENST00000355133 OR10AG1Q8NH19 301 aa11.15□□□□□ -0.62
SCN8A-202ENST00000355133 ARPC1AQ92747 370 aa11.15□□□□□ -0.62
SCN8A-202ENST00000355133 C1QTNF5Q9BXJ0 243 aa11.15□□□□□ -0.62
SCN8A-202ENST00000355133 SCGB1A1P11684 91 aa11.15□□□□□ -0.62
SCN8A-202ENST00000355133 NPCDR1Q9BY65 106 aa11.15□□□□□ -0.62
SCN8A-202ENST00000355133 CIRBPQ14011 172 aaKnown RBP11.15□□□□□ -0.62
SCN8A-202ENST00000355133 TEX45Q8NA69 505 aa11.15□□□□□ -0.62
SCN8A-202ENST00000355133 TRAV24A0A0B4J272 114 aa11.15□□□□□ -0.63
SCN8A-202ENST00000355133 SUMO2P61956 95 aaKnown RBP11.15□□□□□ -0.63
SCN8A-202ENST00000355133 NUTF2P61970 127 aaKnown RBP11.15□□□□□ -0.63
SCN8A-202ENST00000355133 COL5A1-AS1Q5SY13 56 aa11.15□□□□□ -0.63
SCN8A-202ENST00000355133 ZNF385CQ66K41 422 aaPredicted RBP11.15□□□□□ -0.63
SCN8A-202ENST00000355133 ATOH7Q8N100 152 aa11.15□□□□□ -0.63
SCN8A-202ENST00000355133 CGAP01215 116 aa11.14□□□□□ -0.63
SCN8A-202ENST00000355133 MRPL14Q6P1L8 145 aaKnown RBP11.14□□□□□ -0.63
SCN8A-202ENST00000355133 IGLV3-19P01714 112 aa11.14□□□□□ -0.63
SCN8A-202ENST00000355133 SAPCD1Q5SSQ6 148 aa11.14□□□□□ -0.63
SCN8A-202ENST00000355133 RGPD3A6NKT7 1758 aaPredicted RBP11.14□□□□□ -0.63
SCN8A-202ENST00000355133 C17orf100A8MU93 164 aa11.14□□□□□ -0.63
SCN8A-202ENST00000355133 FOLR2P14207 255 aa11.14□□□□□ -0.63
SCN8A-202ENST00000355133 EMP1P54849 157 aa11.14□□□□□ -0.63
SCN8A-202ENST00000355133 BIVMQ86UB2 503 aa11.14□□□□□ -0.63
SCN8A-202ENST00000355133 C21orf62Q9NYP8 219 aa11.14□□□□□ -0.63
SCN8A-202ENST00000355133 SHISA3A0PJX4 238 aa11.14□□□□□ -0.63
SCN8A-202ENST00000355133 NBEAP1P0C6P0 100 aa11.14□□□□□ -0.63
SCN8A-202ENST00000355133 FABP2P12104 132 aa11.14□□□□□ -0.63
SCN8A-202ENST00000355133 PMCHL1Q16048 86 aa11.14□□□□□ -0.63
SCN8A-202ENST00000355133 DUX3Q96PT4 197 aa11.14□□□□□ -0.63
SCN8A-202ENST00000355133 TM2D1Q9BX74 207 aa11.14□□□□□ -0.63
SCN8A-202ENST00000355133 NPIPB9F8W1W9 429 aa11.13□□□□□ -0.63
SCN8A-202ENST00000355133 WDR82Q6UXN9 313 aa11.13□□□□□ -0.63
SCN8A-202ENST00000355133 OR4X2Q8NGF9 303 aa11.13□□□□□ -0.63
SCN8A-202ENST00000355133 GAGE10A6NGK3 116 aa11.13□□□□□ -0.63
SCN8A-202ENST00000355133 CCL3L1P16619 93 aa11.13□□□□□ -0.63
SCN8A-202ENST00000355133 RTN4RL2Q86UN3 420 aa11.13□□□□□ -0.63
SCN8A-202ENST00000355133 OR13C6PQ8NH95 151 aa11.13□□□□□ -0.63
SCN8A-202ENST00000355133 A0A0G2JLM5 398 aa11.13□□□□□ -0.63
SCN8A-202ENST00000355133 TFF1P04155 84 aa11.13□□□□□ -0.63
SCN8A-202ENST00000355133 MARVELD3Q96A59 401 aa11.13□□□□□ -0.63
SCN8A-202ENST00000355133 HTN3P15516 51 aa11.13□□□□□ -0.63
SCN8A-202ENST00000355133 LHX2P50458 406 aa11.13□□□□□ -0.63
SCN8A-202ENST00000355133 ZCCHC24Q8N2G6 241 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms