RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 LINC01587Q99440 93 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 DOCK5Q9H7D0 1870 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 NDUFS5O43920 106 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 LY6EQ16553 131 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 CLEC7AQ9BXN2 247 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 DOCK1Q14185 1865 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 A0A0A6YYD5 115 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 IGHV3-23P01764 117 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 NPCDR1Q9BY65 106 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 V9GYH0 126 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 COL16A1Q07092 1604 aaPredicted RBP6.92□□□□□ -1.3
SCN8A-201ENST00000354534 A0A0G2JLM5 398 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 CXorf51AA0A1B0GTR3 108 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 RPL36A-HNRNPH2H7BZ11 118 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 GFERP55789 205 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 UCP3P55916 312 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 MIXL1Q9H2W2 232 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 SDF2L1Q9HCN8 221 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 IGKCP01834 107 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 EGR1P18146 543 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 HIST1H2BAQ96A08 127 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 NAA38Q9BRA0 125 aaKnown RBP6.92□□□□□ -1.3
SCN8A-201ENST00000354534 TRAV30A0A087WSZ9 112 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 PEAR1Q5VY43 1037 aaPredicted RBP6.92□□□□□ -1.3
SCN8A-201ENST00000354534 SDK2Q58EX2 2172 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 GBF1Q92538 1859 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 PRB1P04280 392 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 PRR35P0CG20 571 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 SPINK14Q6IE38 97 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 WDYHV1Q96HA8 205 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 ZNHIT1O43257 154 aa6.92□□□□□ -1.3
SCN8A-201ENST00000354534 VEGFBP49765 207 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 DSPPQ9NZW4 1301 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 OGG1O15527 345 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 CLEC2AQ6UVW9 174 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 EEF1AKMT3Q96AZ1 226 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 PRB2P02812 416 aaPredicted RBP6.91□□□□□ -1.3
SCN8A-201ENST00000354534 SPANXA1Q9NS26 97 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 IGHV3-49A0A0A0MS15 119 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 IGHV3-35A0A0C4DH35 117 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 LINC00587B1AMM8 73 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 GFRA3O60609 400 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 RPRMQ9NS64 109 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 ARAP2Q8WZ64 1704 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 TRAV17A0A0B4J275 112 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 LILRA5A6NI73 299 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 DLX4Q92988 240 aaPredicted RBP6.91□□□□□ -1.3
SCN8A-201ENST00000354534 PKD1L3Q7Z443 1732 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 CD28P10747 220 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 ST20Q9HBF5 79 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 KLK13Q9UKR3 277 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 IFITM1P13164 125 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 ELSPBP1Q96BH3 223 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 FGF22Q9HCT0 170 aa6.91□□□□□ -1.3
SCN8A-201ENST00000354534 UNQ9370/PRO34162Q6UXP9 181 aa6.9□□□□□ -1.3
SCN8A-201ENST00000354534 APCDD1LQ8NCL9 501 aa6.9□□□□□ -1.3
SCN8A-201ENST00000354534 TMEM186Q96B77 213 aa6.9□□□□□ -1.3
SCN8A-201ENST00000354534 SRSF1Q07955 248 aaKnown RBP eCLIP6.9□□□□□ -1.3
SCN8A-201ENST00000354534 CXorf66Q5JRM2 361 aaPredicted RBP6.9□□□□□ -1.3
SCN8A-201ENST00000354534 MORN3Q6PF18 240 aaPredicted RBP6.9□□□□□ -1.3
SCN8A-201ENST00000354534 A0A0J9YW62 118 aa6.9□□□□□ -1.3
SCN8A-201ENST00000354534 HIGD1CA8MV81 97 aa6.9□□□□□ -1.3
SCN8A-201ENST00000354534 P2RY6Q15077 328 aa6.9□□□□□ -1.3
SCN8A-201ENST00000354534 FAM214BQ7L5A3 538 aa6.9□□□□□ -1.3
SCN8A-201ENST00000354534 DEFB123Q8N688 67 aa6.9□□□□□ -1.3
SCN8A-201ENST00000354534 CD5P06127 495 aa6.9□□□□□ -1.3
SCN8A-201ENST00000354534 PSMG4Q5JS54 123 aa6.9□□□□□ -1.3
SCN8A-201ENST00000354534 C16orf47Q6ZP98 133 aaPredicted RBP6.9□□□□□ -1.3
SCN8A-201ENST00000354534 SELENOHQ8IZQ5 122 aaKnown RBP6.9□□□□□ -1.3
SCN8A-201ENST00000354534 TPRX1Q8N7U7 411 aa6.9□□□□□ -1.3
SCN8A-201ENST00000354534 FER1L6-AS1Q8NA97 138 aa6.9□□□□□ -1.3
SCN8A-201ENST00000354534 PAQR9Q6ZVX9 377 aa6.9□□□□□ -1.31
SCN8A-201ENST00000354534 CHST5Q9GZS9 411 aa6.9□□□□□ -1.31
SCN8A-201ENST00000354534 MRM2Q9UI43 246 aaKnown RBP6.9□□□□□ -1.31
SCN8A-201ENST00000354534 SF3B6Q9Y3B4 125 aaKnown RBP6.9□□□□□ -1.31
SCN8A-201ENST00000354534 DEFB124Q8NES8 71 aa6.9□□□□□ -1.31
SCN8A-201ENST00000354534 GPR132Q9UNW8 380 aa6.9□□□□□ -1.31
SCN8A-201ENST00000354534 PKDREJQ9NTG1 2253 aa6.9□□□□□ -1.31
SCN8A-201ENST00000354534 CA11O75493 328 aa6.9□□□□□ -1.31
SCN8A-201ENST00000354534 SRFP11831 508 aa6.9□□□□□ -1.31
SCN8A-201ENST00000354534 SOX8P57073 446 aa6.9□□□□□ -1.31
SCN8A-201ENST00000354534 UNC119Q13432 240 aa6.9□□□□□ -1.31
SCN8A-201ENST00000354534 TMEM252Q8N6L7 170 aa6.9□□□□□ -1.31
SCN8A-201ENST00000354534 PRDM13Q9H4Q3 707 aa6.9□□□□□ -1.31
SCN8A-201ENST00000354534 SEPSECSQ9HD40 501 aaKnown RBP6.9□□□□□ -1.31
SCN8A-201ENST00000354534 C1QTNF9P0C862 333 aa6.9□□□□□ -1.31
SCN8A-201ENST00000354534 EFNB1P98172 346 aa6.9□□□□□ -1.31
SCN8A-201ENST00000354534 BOD1L2Q8IYS8 172 aa6.9□□□□□ -1.31
SCN8A-201ENST00000354534 IL11P20809 199 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 CCL1P22362 96 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 C9orf50Q5SZB4 431 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 TDHQ8IZJ6 230 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 NRN1Q9NPD7 142 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 IGHV3OR16-13A0A075B7E8 117 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 IGHV3-74A0A0B4J1X5 117 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 FXYD1O00168 92 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 NMBP08949 121 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 CD7P09564 240 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 PNLIPP16233 465 aa6.89□□□□□ -1.31
SCN8A-201ENST00000354534 DCAF12L2Q5VW00 463 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms