RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 NEURL2Q9BR09 285 aa11.95□□□□□ -0.5
PDGFA-201ENST00000354513 TUBA4BQ9H853 241 aa11.95□□□□□ -0.5
PDGFA-201ENST00000354513 ZC4H2Q9NQZ6 224 aa11.95□□□□□ -0.5
PDGFA-201ENST00000354513 RABL2AQ9UBK7 228 aaPredicted RBP11.95□□□□□ -0.5
PDGFA-201ENST00000354513 PEMTQ9UBM1 199 aa11.95□□□□□ -0.5
PDGFA-201ENST00000354513 RABL2BQ9UNT1 228 aa11.95□□□□□ -0.5
PDGFA-201ENST00000354513 RBMX2Q9Y388 322 aaKnown RBP11.95□□□□□ -0.5
PDGFA-201ENST00000354513 C2orf70A6NJV1 201 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 MPPED1O15442 326 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 TPPPO94811 219 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 IL6RP08887 468 aaPredicted RBP11.94□□□□□ -0.5
PDGFA-201ENST00000354513 ATP5G2Q06055 141 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 TATDN3Q17R31 274 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 DEFB114Q30KQ6 69 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 SPANXN2Q5MJ10 180 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 CCDC190Q86UF4 302 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 MMD2Q8IY49 270 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 PUSL1Q8N0Z8 303 aaKnown RBP11.94□□□□□ -0.5
PDGFA-201ENST00000354513 DEFB125Q8N687 156 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 CACNG8Q8WXS5 425 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 CCDC140Q96MF4 163 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 FANCD2OSQ96PS1 177 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 ABHD1Q96SE0 405 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 OR2W1Q9Y3N9 320 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 SELENOKQ9Y6D0 94 aa11.94□□□□□ -0.5
PDGFA-201ENST00000354513 MEIS3P1A6NDR6 274 aa11.93□□□□□ -0.5
PDGFA-201ENST00000354513 CGB1A6NKQ9 187 aa11.93□□□□□ -0.5
PDGFA-201ENST00000354513 MYOD1P15172 320 aa11.93□□□□□ -0.5
PDGFA-201ENST00000354513 CBX5P45973 191 aa11.93□□□□□ -0.5
PDGFA-201ENST00000354513 C15orf32Q32M92 178 aa11.93□□□□□ -0.5
PDGFA-201ENST00000354513 RNASE12Q5GAN4 147 aaKnown RBP11.93□□□□□ -0.5
PDGFA-201ENST00000354513 NECAP1Q8NC96 275 aa11.93□□□□□ -0.5
PDGFA-201ENST00000354513 GPHA2Q96T91 129 aa11.93□□□□□ -0.5
PDGFA-201ENST00000354513 SPIN2AQ99865 258 aa11.93□□□□□ -0.5
PDGFA-201ENST00000354513 SPIN2BQ9BPZ2 258 aa11.93□□□□□ -0.5
PDGFA-201ENST00000354513 SOSTQ9BQB4 213 aa11.93□□□□□ -0.5
PDGFA-201ENST00000354513 ST6GALNAC5Q9BVH7 336 aa11.93□□□□□ -0.5
PDGFA-201ENST00000354513 TUSC2O75896 110 aa11.92□□□□□ -0.5
PDGFA-201ENST00000354513 KBTBD11O94819 623 aa11.92□□□□□ -0.5
PDGFA-201ENST00000354513 NDUFB8O95169 186 aa11.92□□□□□ -0.5
PDGFA-201ENST00000354513 IGHV3-23P01764 117 aa11.92□□□□□ -0.5
PDGFA-201ENST00000354513 IFNA6P05013 189 aa11.92□□□□□ -0.5
PDGFA-201ENST00000354513 ZNF735P0CB33 412 aa11.92□□□□□ -0.5
PDGFA-201ENST00000354513 FOLR2P14207 255 aa11.92□□□□□ -0.5
PDGFA-201ENST00000354513 KLK9Q2XQG4 91 aa11.92□□□□□ -0.5
PDGFA-201ENST00000354513 TMEM167AQ8TBQ9 72 aa11.92□□□□□ -0.5
PDGFA-201ENST00000354513 WDR89Q96FK6 387 aaPredicted RBP11.92□□□□□ -0.5
PDGFA-201ENST00000354513 SCPEP1Q9HB40 452 aa11.92□□□□□ -0.5
PDGFA-201ENST00000354513 IFT46Q9NQC8 304 aa11.92□□□□□ -0.5
PDGFA-201ENST00000354513 KLK9Q9UKQ9 250 aa11.92□□□□□ -0.5
PDGFA-201ENST00000354513 ZNF257Q9Y2Q1 563 aa11.92□□□□□ -0.5
PDGFA-201ENST00000354513 S4R3C0 116 aa11.92□□□□□ -0.5
PDGFA-201ENST00000354513 V9GYH0 126 aa11.92□□□□□ -0.5
PDGFA-201ENST00000354513 NPIPB5A8MRT5 1133 aa11.91□□□□□ -0.5
PDGFA-201ENST00000354513 LGALS9O00182 355 aa11.91□□□□□ -0.5
PDGFA-201ENST00000354513 SULT1C2O00338 296 aa11.91□□□□□ -0.5
PDGFA-201ENST00000354513 OR2C1O95371 312 aa11.91□□□□□ -0.5
PDGFA-201ENST00000354513 FCER2P06734 321 aa11.91□□□□□ -0.5
PDGFA-201ENST00000354513 AREGP15514 252 aa11.91□□□□□ -0.5
PDGFA-201ENST00000354513 PTBP1P26599 531 aaKnown RBP eCLIP11.91□□□□□ -0.5
PDGFA-201ENST00000354513 ETV6P41212 452 aa11.91□□□□□ -0.5
PDGFA-201ENST00000354513 KIR2DS2P43631 304 aa11.91□□□□□ -0.5
PDGFA-201ENST00000354513 MRPS10P82664 201 aaKnown RBP11.91□□□□□ -0.5
PDGFA-201ENST00000354513 PYDC2Q56P42 97 aa11.91□□□□□ -0.5
PDGFA-201ENST00000354513 LINC00299Q6ZSB3 139 aa11.91□□□□□ -0.5
PDGFA-201ENST00000354513 GVQW1Q8N7I0 195 aa11.91□□□□□ -0.5
PDGFA-201ENST00000354513 OR52I2Q8NH67 350 aa11.91□□□□□ -0.5
PDGFA-201ENST00000354513 GPX8Q8TED1 209 aa11.91□□□□□ -0.5
PDGFA-201ENST00000354513 FCAMRQ8WWV6 532 aa11.91□□□□□ -0.5
PDGFA-201ENST00000354513 SRD5A3Q9H8P0 318 aa11.91□□□□□ -0.5
PDGFA-201ENST00000354513 TMEM213A2RRL7 107 aa11.9□□□□□ -0.5
PDGFA-201ENST00000354513 CTDSPLO15194 276 aa11.9□□□□□ -0.5
PDGFA-201ENST00000354513 CREBL2O60519 120 aaPredicted RBP11.9□□□□□ -0.5
PDGFA-201ENST00000354513 CRYGCP07315 174 aa11.9□□□□□ -0.5
PDGFA-201ENST00000354513 RPL27AP46776 148 aaKnown RBP11.9□□□□□ -0.5
PDGFA-201ENST00000354513 HOGA1Q86XE5 327 aa11.9□□□□□ -0.5
PDGFA-201ENST00000354513 BEST4Q8NFU0 473 aa11.9□□□□□ -0.5
PDGFA-201ENST00000354513 DYNLRB2Q8TF09 96 aa11.9□□□□□ -0.5
PDGFA-201ENST00000354513 OR2A7Q96R45 310 aa11.9□□□□□ -0.5
PDGFA-201ENST00000354513 MLXQ9UH92 298 aa11.9□□□□□ -0.5
PDGFA-201ENST00000354513 FBXL7Q9UJT9 491 aa11.9□□□□□ -0.5
PDGFA-201ENST00000354513 FRAS1Q86XX4 4008 aa11.9□□□□□ -0.5
PDGFA-201ENST00000354513 A8MWP6 167 aa11.89□□□□□ -0.51
PDGFA-201ENST00000354513 OR11H12B2RN74 326 aa11.89□□□□□ -0.51
PDGFA-201ENST00000354513 GABARAPH6UMI1 98 aa11.89□□□□□ -0.51
PDGFA-201ENST00000354513 GGCTO75223 188 aaKnown RBP11.89□□□□□ -0.51
PDGFA-201ENST00000354513 ACTL6BO94805 426 aa11.89□□□□□ -0.51
PDGFA-201ENST00000354513 CTRB1P17538 263 aa11.89□□□□□ -0.51
PDGFA-201ENST00000354513 ZNF79Q15937 498 aa11.89□□□□□ -0.51
PDGFA-201ENST00000354513 CTRB2Q6GPI1 263 aa11.89□□□□□ -0.51
PDGFA-201ENST00000354513 TMEM61Q8N0U2 210 aa11.89□□□□□ -0.51
PDGFA-201ENST00000354513 OR4S2Q8NH73 311 aa11.89□□□□□ -0.51
PDGFA-201ENST00000354513 SMIM4Q8WVI0 70 aa11.89□□□□□ -0.51
PDGFA-201ENST00000354513 TCTEX1D2Q8WW35 142 aa11.89□□□□□ -0.51
PDGFA-201ENST00000354513 FYTTD1Q96QD9 318 aaKnown RBP11.89□□□□□ -0.51
PDGFA-201ENST00000354513 HSD17B10Q99714 261 aaKnown RBP11.89□□□□□ -0.51
PDGFA-201ENST00000354513 SLC2A9Q9NRM0 540 aa11.89□□□□□ -0.51
PDGFA-201ENST00000354513 SLC2A8Q9NY64 477 aa11.89□□□□□ -0.51
PDGFA-201ENST00000354513 ANXA10Q9UJ72 324 aa11.89□□□□□ -0.51
PDGFA-201ENST00000354513 PRELID3BQ9Y3B1 194 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms