RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 ARPC4P59998 168 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 MSMO1Q15800 293 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 FAM106AQ4KMX7 169 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 ZNF57Q68EA5 555 aaPredicted RBP10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 OR4A47Q6IF82 309 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 TMEM61Q8N0U2 210 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 OR13F1Q8NGS4 319 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 OR5H6Q8NGV6 325 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 OR4A5Q8NH83 315 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 FCGR1BQ92637 280 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 SLC25A38Q96DW6 304 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 MLXQ9UH92 298 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 ALMS1Q8TCU4 4167 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 IGLV11-55A0A075B6I3 123 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 TRAV18A0A075B6X5 111 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 ZNF320A2RRD8 509 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 CLEC2LP0C7M8 214 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 MXD1Q05195 221 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 SPAG16Q8N0X2 631 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 UXS1Q8NBZ7 420 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 TRBV7-1A0A0A6YYK4 115 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 MFSD2BA6NFX1 497 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 JTBO76095 146 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 PPYP01298 95 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 DEFA4P12838 97 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 SCAND1P57086 179 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 OR2B8PP59922 312 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 ZNF773Q6PK81 442 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 SLC16A13Q7RTY0 426 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 HOGA1Q86XE5 327 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 ZBTB34Q8NCN2 500 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 AIFM2Q9BRQ8 373 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 RNF167Q9H6Y7 350 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 HRASLSQ9HDD0 168 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 ETV7Q9Y603 341 aa10.84□□□□□ -0.67
PRPF40A-201ENST00000354363 TRAV3A0A0B4J244 114 aa10.83□□□□□ -0.68
PRPF40A-201ENST00000354363 SULT1C2O00338 296 aa10.83□□□□□ -0.68
PRPF40A-201ENST00000354363 RBFOX2O43251 390 aaKnown RBP eCLIP10.83□□□□□ -0.682e-9■■■■■ 32.3
PRPF40A-201ENST00000354363 CLEC3BP05452 202 aa10.83□□□□□ -0.68
PRPF40A-201ENST00000354363 TM4SF20Q53R12 229 aa10.83□□□□□ -0.68
PRPF40A-201ENST00000354363 CXorf58Q96LI9 332 aa10.83□□□□□ -0.68
PRPF40A-201ENST00000354363 SLC5A7Q9GZV3 580 aa10.83□□□□□ -0.68
PRPF40A-201ENST00000354363 IGLC7A0M8Q6 106 aa10.82□□□□□ -0.68
PRPF40A-201ENST00000354363 UPK2O00526 184 aa10.82□□□□□ -0.68
PRPF40A-201ENST00000354363 SCAF4O95104 1147 aaKnown RBP10.82□□□□□ -0.68
PRPF40A-201ENST00000354363 FCER2P06734 321 aa10.82□□□□□ -0.68
PRPF40A-201ENST00000354363 TAS2R31P59538 309 aa10.82□□□□□ -0.68
PRPF40A-201ENST00000354363 POU2AF1Q16633 256 aa10.82□□□□□ -0.68
PRPF40A-201ENST00000354363 IDNKQ5T6J7 187 aa10.82□□□□□ -0.68
PRPF40A-201ENST00000354363 BTNL8Q6UX41 500 aa10.82□□□□□ -0.68
PRPF40A-201ENST00000354363 UNQ9165/PRO28630Q6UXU0 137 aa10.82□□□□□ -0.68
PRPF40A-201ENST00000354363 OR52B4Q8NGK2 314 aa10.82□□□□□ -0.68
PRPF40A-201ENST00000354363 A0A0A6YYH2 397 aa10.81□□□□□ -0.68
PRPF40A-201ENST00000354363 A6NJ64 397 aa10.81□□□□□ -0.68
PRPF40A-201ENST00000354363 HPRT1P00492 218 aa10.81□□□□□ -0.68
PRPF40A-201ENST00000354363 C8orf88P0DMB2 117 aa10.81□□□□□ -0.68
PRPF40A-201ENST00000354363 NQO2P16083 231 aa10.81□□□□□ -0.68
PRPF40A-201ENST00000354363 FXYD4P59646 89 aa10.81□□□□□ -0.68
PRPF40A-201ENST00000354363 CATR1Q13166 79 aa10.81□□□□□ -0.68
PRPF40A-201ENST00000354363 ZNF818PQ6ZRF7 136 aa10.81□□□□□ -0.68
PRPF40A-201ENST00000354363 ZNF502Q8TBZ5 544 aa10.81□□□□□ -0.68
PRPF40A-201ENST00000354363 YTHDF1Q9BYJ9 559 aaKnown RBP10.81□□□□□ -0.68
PRPF40A-201ENST00000354363 AUNIPQ9H7T9 357 aa10.81□□□□□ -0.68
PRPF40A-201ENST00000354363 GPR183P32249 361 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 ANKRD55Q3KP44 614 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 OR51H1Q8NH63 302 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 GIMAP1Q8WWP7 306 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 MARC2Q969Z3 335 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 SRSF8Q9BRL6 282 aaKnown RBP10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 OVOL2Q9BRP0 275 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 GGTLC1Q9BX51 225 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 COMMD5Q9GZQ3 224 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 TMEM140Q9NV12 185 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 LOC102724200A0A096LPH7 203 aaPredicted RBP10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 TRAV25A0A0B4J276 109 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 IGHV3-35A0A0C4DH35 117 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 LOC100506127A0A0U1RQW1 187 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 S1PR2O95136 353 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 ZNF585BQ52M93 769 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 TMEM17Q86X19 198 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 OR5AP2Q8NGF4 316 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 OR10W1Q8NGF6 305 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 ZNF436Q9C0F3 470 aaPredicted RBP10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 PLEKHA2Q9HB19 425 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 DIABLOQ9NR28 239 aa10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 MRPL27Q9P0M9 148 aaKnown RBP10.8□□□□□ -0.68
PRPF40A-201ENST00000354363 MEIS3P1A6NDR6 274 aa10.79□□□□□ -0.68
PRPF40A-201ENST00000354363 FGF2P09038 288 aa10.79□□□□□ -0.68
PRPF40A-201ENST00000354363 PTBP1P26599 531 aaKnown RBP eCLIP10.79□□□□□ -0.68
PRPF40A-201ENST00000354363 CBX5P45973 191 aa10.79□□□□□ -0.68
PRPF40A-201ENST00000354363 ELLP55199 621 aaPredicted RBP10.79□□□□□ -0.68
PRPF40A-201ENST00000354363 AADACL3Q5VUY0 350 aa10.79□□□□□ -0.68
PRPF40A-201ENST00000354363 PLET1Q6UQ28 207 aa10.79□□□□□ -0.68
PRPF40A-201ENST00000354363 DMBX1Q8NFW5 382 aa10.79□□□□□ -0.68
PRPF40A-201ENST00000354363 CD300LFQ8TDQ1 290 aa10.79□□□□□ -0.68
PRPF40A-201ENST00000354363 QTRT1Q9BXR0 403 aaKnown RBP10.79□□□□□ -0.68
PRPF40A-201ENST00000354363 Q9H521 79 aa10.79□□□□□ -0.68
PRPF40A-201ENST00000354363 THYN1Q9P016 225 aa10.79□□□□□ -0.68
PRPF40A-201ENST00000354363 TGOLN2O43493 480 aa10.78□□□□□ -0.68
PRPF40A-201ENST00000354363 ATP6V1G2O95670 118 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms