RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 POLDIP2Q9Y2S7 368 aa7.11□□□□□ -1.27
TRIM55-204ENST00000353317 VPS13CQ709C8 3753 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 CHD6Q8TD26 2715 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 C12orf77C9JDV5 145 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 C11orf94C9JXX5 98 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 SH2D1BO14796 132 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 SPRY3O43610 288 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 GCGP01275 180 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 SELLP14151 372 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 EGR1P18146 543 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 MSMO1Q15800 293 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 FBXL19-AS1Q494R0 122 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 FAM201AQ5SY85 155 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 TMEM108Q6UXF1 575 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 Q8N7P7 452 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 GALMQ96C23 342 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 NEIL1Q96FI4 390 aaPredicted RBP7.1□□□□□ -1.27
TRIM55-204ENST00000353317 DSCAML1Q8TD84 2053 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 VENTXO95231 258 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 HAND1O96004 215 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 TYMSP04818 313 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 CHRNA7P36544 502 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 KLF3P57682 345 aaPredicted RBP7.1□□□□□ -1.27
TRIM55-204ENST00000353317 SSX2Q16385 188 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 VWC2Q2TAL6 325 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 LINC01551Q86U37 167 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 PLPPR2Q96GM1 343 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 NOL4LQ96MY1 436 aaPredicted RBP7.1□□□□□ -1.27
TRIM55-204ENST00000353317 C2orf88Q9BSF0 95 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 HES4Q9HCC6 221 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 METRNQ9UJH8 293 aa7.1□□□□□ -1.27
TRIM55-204ENST00000353317 USF3Q68DE3 2245 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-204ENST00000353317 E7EQL1 145 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 IFNL4K9M1U5 179 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 LOXP28300 417 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-204ENST00000353317 SRP14P37108 136 aaKnown RBP7.09□□□□□ -1.27
TRIM55-204ENST00000353317 AESQ08117 197 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 GCSAMLQ5JQS6 135 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 ZBTB34Q8NCN2 500 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 NUP37Q8NFH4 326 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 OR2V2Q96R30 315 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 NDUFAF3Q9BU61 184 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 DERL1Q9BUN8 251 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 CXXC4Q9H2H0 198 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 TUBG2Q9NRH3 451 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 KCNIP1Q9NZI2 227 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 LINC00473A8K010 186 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 RBMXL2O75526 392 aaKnown RBP7.09□□□□□ -1.27
TRIM55-204ENST00000353317 IGHV1-46P01743 117 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 HBZP02008 142 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 OR4A8P0C604 315 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 IL3RAP26951 378 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 CDC34P49427 236 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-204ENST00000353317 GNB1P62873 340 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 ACOT6Q3I5F7 207 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-204ENST00000353317 LBHQ53QV2 105 aaPredicted RBP7.09□□□□□ -1.27
TRIM55-204ENST00000353317 FAM78BQ5VT40 261 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 ZNF709Q8N972 641 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 ITLN1Q8WWA0 313 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 RNASE6Q93091 150 aaKnown RBP7.09□□□□□ -1.27
TRIM55-204ENST00000353317 TMEM18Q96B42 140 aa7.09□□□□□ -1.27
TRIM55-204ENST00000353317 DOCK11Q5JSL3 2073 aa7.09□□□□□ -1.28
TRIM55-204ENST00000353317 SVEP1Q4LDE5 3571 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 TRAV38-1A0A0B4J264 116 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 TMEM30CPA0ZSE6 113 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 PGPEP1LA6NFU8 196 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 CLDN14O95500 239 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 ATP5G3P48201 142 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 CNN1P51911 297 aaKnown RBP7.08□□□□□ -1.28
TRIM55-204ENST00000353317 UBE2G2P60604 165 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 CATR1Q13166 79 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 USF2Q15853 346 aaPredicted RBP7.08□□□□□ -1.28
TRIM55-204ENST00000353317 H2BFWTQ7Z2G1 175 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 GCSAMQ8N6F7 178 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 CSMD2Q7Z408 3487 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 A0A1B0GUS0 222 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 A0A1W2PPR1 153 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 OOEPA6NGQ2 149 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 TMEM210A6NLX4 147 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 C15orf62A8K5M9 175 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 C19orf84I3L1E1 186 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 RAB29O14966 203 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 ST8SIA5O15466 376 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 NDUFB4O95168 129 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 SSTR5P35346 364 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 RPL15P61313 204 aaKnown RBP7.08□□□□□ -1.28
TRIM55-204ENST00000353317 LCN2P80188 198 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 PAX5Q02548 391 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 Q3ZCU0 254 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 KCNIP4Q6PIL6 250 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 MOGAT3Q86VF5 341 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 MRPL41Q8IXM3 137 aaKnown RBP7.08□□□□□ -1.28
TRIM55-204ENST00000353317 TPRX1Q8N7U7 411 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 ZNF114Q8NC26 417 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 BEND2Q8NDZ0 799 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 MRGPRDQ8TDS7 321 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 COQ2Q96H96 371 aa7.08□□□□□ -1.28
TRIM55-204ENST00000353317 CIB3Q96Q77 187 aaPredicted RBP7.08□□□□□ -1.28
TRIM55-204ENST00000353317 DOPEY1Q5JWR5 2465 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms