RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 MED12LQ86YW9 2145 aa8.9□□□□□ -0.98
CAPN3-203ENST00000349748 IGKV1-12A0A0C4DH73 117 aa8.9□□□□□ -0.99
CAPN3-203ENST00000349748 RRHO14718 337 aa8.9□□□□□ -0.99
CAPN3-203ENST00000349748 PDCD6O75340 191 aa8.9□□□□□ -0.99
CAPN3-203ENST00000349748 IGKV1-5P01602 117 aa8.9□□□□□ -0.99
CAPN3-203ENST00000349748 IGKV1D-12P01611 117 aa8.9□□□□□ -0.99
CAPN3-203ENST00000349748 HLA-DQA1P01909 254 aa8.9□□□□□ -0.99
CAPN3-203ENST00000349748 HLA-DRB1P01911 266 aa8.9□□□□□ -0.99
CAPN3-203ENST00000349748 EDDM3BP56851 147 aa8.9□□□□□ -0.99
CAPN3-203ENST00000349748 VWC2Q2TAL6 325 aa8.9□□□□□ -0.99
CAPN3-203ENST00000349748 TMEM249Q2WGJ8 235 aa8.9□□□□□ -0.99
CAPN3-203ENST00000349748 FAM120AOSQ5T036 256 aa8.9□□□□□ -0.99
CAPN3-203ENST00000349748 SSX8Q7RTT4 187 aa8.9□□□□□ -0.99
CAPN3-203ENST00000349748 DGAT2Q96PD7 388 aa8.9□□□□□ -0.99
CAPN3-203ENST00000349748 OR7C1O76099 320 aaPredicted RBP8.89□□□□□ -0.99
CAPN3-203ENST00000349748 AESQ08117 197 aa8.89□□□□□ -0.99
CAPN3-203ENST00000349748 PLCXD2Q0VAA5 305 aa8.89□□□□□ -0.99
CAPN3-203ENST00000349748 SFTPA2Q8IWL1 248 aa8.89□□□□□ -0.99
CAPN3-203ENST00000349748 DEFB119Q8N690 84 aa8.89□□□□□ -0.99
CAPN3-203ENST00000349748 B4GALT7Q9UBV7 327 aa8.89□□□□□ -0.99
CAPN3-203ENST00000349748 CUL9Q8IWT3 2517 aa8.89□□□□□ -0.99
CAPN3-203ENST00000349748 LAMA1P25391 3075 aa8.89□□□□□ -0.99
CAPN3-203ENST00000349748 DIDO1Q9BTC0 2240 aaKnown RBP8.89□□□□□ -0.99
CAPN3-203ENST00000349748 H0Y8X5 98 aa8.89□□□□□ -0.99
CAPN3-203ENST00000349748 HSPB6O14558 160 aa8.89□□□□□ -0.99
CAPN3-203ENST00000349748 INO80CQ6PI98 192 aaPredicted RBP8.89□□□□□ -0.99
CAPN3-203ENST00000349748 ZFYVE21Q9BQ24 234 aa8.89□□□□□ -0.99
CAPN3-203ENST00000349748 BOKQ9UMX3 212 aaPredicted RBP8.89□□□□□ -0.99
CAPN3-203ENST00000349748 A0A1B0GW15 77 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 TMEM189A5PLL7 270 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 DHRS3O75911 302 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 CLEC3BP05452 202 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 CCNOP22674 350 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 MALLQ13021 153 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 WFDC2Q14508 124 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 Q6ZSR6 202 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 SH2D6Q7Z4S9 175 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 TMEM116Q8NCL8 245 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 SPSB4Q96A44 273 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 URB1-AS1Q96HZ7 61 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 SRSF8Q9BRL6 282 aaKnown RBP8.88□□□□□ -0.99
CAPN3-203ENST00000349748 TIMM8BQ9Y5J9 83 aaPredicted RBP8.88□□□□□ -0.99
CAPN3-203ENST00000349748 CPAMD8Q8IZJ3 1885 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 VPS13AQ96RL7 3174 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 A0A1W2PPV4 95 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 PRSS38A1L453 326 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 A6NDN8 102 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 H3BMH7 237 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 GDF5OSQ5U4N7 250 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 C9orf135Q5VTT2 229 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 TMEM14EPQ6UXP3 125 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 SPEM1Q8N4L4 309 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 NANOS1Q8WY41 292 aaKnown RBP8.88□□□□□ -0.99
CAPN3-203ENST00000349748 TSACCQ96A04 125 aaPredicted RBP8.88□□□□□ -0.99
CAPN3-203ENST00000349748 SPAG8Q99932 426 aaPredicted RBP8.88□□□□□ -0.99
CAPN3-203ENST00000349748 TMEM147Q9BVK8 224 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 MRPL16Q9NX20 251 aaKnown RBP8.88□□□□□ -0.99
CAPN3-203ENST00000349748 KCNIP1Q9NZI2 227 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 JPT1Q9UK76 154 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 IGKV1-6A0A0C4DH72 117 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 SIVA1O15304 175 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 INSL3P51460 131 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 PPP1CAP62136 330 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 PATE1Q8WXA2 126 aa8.88□□□□□ -0.99
CAPN3-203ENST00000349748 ESPL1Q14674 2120 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 WDFY3Q8IZQ1 3526 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 CRXO43186 299 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-203ENST00000349748 LIPFP07098 398 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 FABP2P12104 132 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 MRPS21P82921 87 aaKnown RBP8.87□□□□□ -0.99
CAPN3-203ENST00000349748 COLCA1Q6ZS62 124 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 BOD1L2Q8IYS8 172 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 OSR2Q8N2R0 312 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 SMIM20Q8N5G0 67 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 PP6455Q8WZ26 134 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 TMEM191AQ9H0A3 160 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 RABAC1Q9UI14 185 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 KCNS2Q9ULS6 477 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 PCDH15Q96QU1 1955 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 OR11H12B2RN74 326 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 VWC2LB2RUY7 222 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 B5MCH6 92 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 J3KRW8 73 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 CLPSP04118 112 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 GABRG2P18507 467 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 CD24P25063 80 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 FCGR2BP31994 310 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-203ENST00000349748 RPS21P63220 83 aaKnown RBP8.87□□□□□ -0.99
CAPN3-203ENST00000349748 OR8B8Q15620 311 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 SPINK9Q5DT21 86 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 OR11H1Q8NG94 326 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 OR11H2Q8NH07 326 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 MBD6Q96DN6 1003 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 SSBP3Q9BWW4 388 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-203ENST00000349748 CHRNA10Q9GZZ6 450 aa8.87□□□□□ -0.99
CAPN3-203ENST00000349748 SPANXB1Q9NS25 103 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-203ENST00000349748 ADAMTS9Q9P2N4 1935 aa8.86□□□□□ -0.99
CAPN3-203ENST00000349748 COX8AP10176 69 aa8.86□□□□□ -0.99
CAPN3-203ENST00000349748 CEACAM16Q2WEN9 425 aa8.86□□□□□ -0.99
CAPN3-203ENST00000349748 TM4SF20Q53R12 229 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms