RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 C20orf204Q6ZNR8 217 aa13.02□□□□□ -0.32
PTPRO-202ENST00000348962 IFI27L2Q9H2X8 130 aa13.02□□□□□ -0.32
PTPRO-202ENST00000348962 PIKFYVEQ9Y2I7 2098 aa13.02□□□□□ -0.32
PTPRO-202ENST00000348962 CACNA1DQ01668 2161 aa13.02□□□□□ -0.32
PTPRO-202ENST00000348962 HSPB1P04792 205 aaKnown RBP13.02□□□□□ -0.32
PTPRO-202ENST00000348962 CA7P43166 264 aa13.02□□□□□ -0.32
PTPRO-202ENST00000348962 FAM3BP58499 235 aaPredicted RBP13.02□□□□□ -0.32
PTPRO-202ENST00000348962 SAMD13Q5VXD3 122 aa13.02□□□□□ -0.32
PTPRO-202ENST00000348962 COLCA1Q6ZS62 124 aa13.02□□□□□ -0.32
PTPRO-202ENST00000348962 SRSF12Q8WXF0 261 aaKnown RBP13.02□□□□□ -0.32
PTPRO-202ENST00000348962 AQP10Q96PS8 301 aa13.02□□□□□ -0.32
PTPRO-202ENST00000348962 CEACAM4O75871 244 aa13.02□□□□□ -0.33
PTPRO-202ENST00000348962 GPR183P32249 361 aa13.02□□□□□ -0.33
PTPRO-202ENST00000348962 C8orf46Q8TAG6 207 aa13.02□□□□□ -0.33
PTPRO-202ENST00000348962 GPR82Q96P67 336 aa13.02□□□□□ -0.33
PTPRO-202ENST00000348962 VDAC2P45880 294 aaPredicted RBP13.01□□□□□ -0.33
PTPRO-202ENST00000348962 FAM74A4Q5TZK3 123 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 CYP2G1PQ6ZSU1 146 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 MRPL20Q9BYC9 149 aaKnown RBP13.01□□□□□ -0.33
PTPRO-202ENST00000348962 A0A1W2PRX2 142 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 H3BTX0 84 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 ARL14EPLP0DKL9 152 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 CCL3L1P16619 93 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 GOLT1AQ6ZVE7 132 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 ZFP30Q9Y2G7 519 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 NBR2O15453 112 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 CD81P60033 236 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 ZNF56Q15929 161 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 TBX15Q96SF7 602 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 IGHV3-49A0A0A0MS15 119 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 C1QL1O75973 258 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 TBX6O95947 436 aaPredicted RBP13.01□□□□□ -0.33
PTPRO-202ENST00000348962 HLA-DQA1P01909 254 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 EFNA4P52798 201 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 PAPPA-AS1Q5QFB9 102 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 TCF24Q7RTU0 167 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 TMEM133Q9H2Q1 129 aa13.01□□□□□ -0.33
PTPRO-202ENST00000348962 DIDO1Q9BTC0 2240 aaKnown RBP13.01□□□□□ -0.33
PTPRO-202ENST00000348962 A0A0G2JK05 382 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 TMEM8BA6NDV4 472 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 GNLYP22749 145 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 LINC00305Q7Z4B0 112 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 RGP1Q92546 391 aaPredicted RBP13□□□□□ -0.33
PTPRO-202ENST00000348962 FOXA2Q9Y261 457 aaPredicted RBP13□□□□□ -0.33
PTPRO-202ENST00000348962 PQLC2LA1A4F0 135 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 PINLYPA6NC86 204 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 FOXI3A8MTJ6 420 aaPredicted RBP13□□□□□ -0.33
PTPRO-202ENST00000348962 FAM209BQ5JX69 171 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 KIR2DL4Q99706 377 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 MAP1LC3AQ9H492 121 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 NEUROG3Q9Y4Z2 214 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 SBF2Q86WG5 1849 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 IGHV1-18A0A0C4DH31 117 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 CRYBB3P26998 211 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 OR4C5Q8NGB2 326 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 TP53RKQ96S44 253 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 GGACTQ9BVM4 153 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 SH3BGRL3Q9H299 93 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 CD69Q07108 199 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 ZCCHC24Q8N2G6 241 aaKnown RBP13□□□□□ -0.33
PTPRO-202ENST00000348962 PLSCR4Q9NRQ2 329 aa13□□□□□ -0.33
PTPRO-202ENST00000348962 SCN2AQ99250 2005 aa12.99□□□□□ -0.33
PTPRO-202ENST00000348962 ZNF207O43670 478 aaKnown RBP12.99□□□□□ -0.33
PTPRO-202ENST00000348962 CLEC19AQ6UXS0 136 aa12.99□□□□□ -0.33
PTPRO-202ENST00000348962 A0A1B0GTI1 187 aa12.99□□□□□ -0.33
PTPRO-202ENST00000348962 MSGN1A6NI15 193 aa12.99□□□□□ -0.33
PTPRO-202ENST00000348962 H7C1H1 209 aa12.99□□□□□ -0.33
PTPRO-202ENST00000348962 IGHV3-11P01762 117 aa12.99□□□□□ -0.33
PTPRO-202ENST00000348962 IGHV3-23P01764 117 aa12.99□□□□□ -0.33
PTPRO-202ENST00000348962 AMY1AP04745 511 aa12.99□□□□□ -0.33
PTPRO-202ENST00000348962 SIGIRRQ6IA17 410 aa12.99□□□□□ -0.33
PTPRO-202ENST00000348962 CBLN2Q8IUK8 224 aa12.99□□□□□ -0.33
PTPRO-202ENST00000348962 CACNG8Q8WXS5 425 aa12.99□□□□□ -0.33
PTPRO-202ENST00000348962 RBBP6Q7Z6E9 1792 aaKnown RBP12.98□□□□□ -0.33
PTPRO-202ENST00000348962 IFITM10A6NMD0 228 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 LYNX1G3V0Z9 82 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 NPIPB7O75200 414 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 LYNX1P0DP58 116 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 ZNF385CQ66K41 422 aaPredicted RBP12.98□□□□□ -0.33
PTPRO-202ENST00000348962 C17orf98A8MV24 154 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 NUDT3O95989 172 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 NBEAP1P0C6P0 100 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 RND3P61587 244 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 ICAM4Q14773 271 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 WDR82Q6UXN9 313 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 WNK3Q9BYP7 1800 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 YPEL1O60688 119 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 UCP1P25874 307 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 RNASEH2CQ8TDP1 164 aaKnown RBP12.98□□□□□ -0.33
PTPRO-202ENST00000348962 PGLYRP4Q96LB8 373 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 YPEL2Q96QA6 119 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 S4R3C0 116 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 TMEM262E9PQX1 116 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 FOXF2Q12947 444 aa12.98□□□□□ -0.33
PTPRO-202ENST00000348962 C9JCJ5 164 aa12.97□□□□□ -0.33
PTPRO-202ENST00000348962 CD300CQ08708 224 aa12.97□□□□□ -0.33
PTPRO-202ENST00000348962 ZNF672Q499Z4 452 aaPredicted RBP12.97□□□□□ -0.33
PTPRO-202ENST00000348962 HIST1H2BAQ96A08 127 aa12.97□□□□□ -0.33
PTPRO-202ENST00000348962 PSMG3Q9BT73 122 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms