RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TCF21O43680 179 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 PSG5Q15238 335 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 C5orf24Q7Z6I8 188 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 FUT9Q9Y231 359 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 PSMB11A5LHX3 300 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 GPX1P07203 203 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 VGLL1Q99990 258 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 ZNF430Q9H8G1 570 aaPredicted RBP9.18□□□□□ -0.94
CLCN6-202ENST00000346436 BEX4Q9NWD9 120 aaPredicted RBP9.18□□□□□ -0.94
CLCN6-202ENST00000346436 EREGO14944 169 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 MPDU1O75352 247 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 SAP30O75446 220 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 CENPFP49454 3210 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 DLX6P56179 175 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 B2MP61769 119 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 HCP5Q6MZN7 132 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 ARPC1AQ92747 370 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 ABHD14BQ96IU4 210 aa9.18□□□□□ -0.94
CLCN6-202ENST00000346436 MRPL37Q9BZE1 423 aaKnown RBP9.18□□□□□ -0.94
CLCN6-202ENST00000346436 CNOT1A5YKK6 2376 aaKnown RBP9.18□□□□□ -0.94
CLCN6-202ENST00000346436 C11orf94C9JXX5 98 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 CD5P06127 495 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 MAS1LP35410 378 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 FAM53AQ6NSI3 398 aaPredicted RBP9.17□□□□□ -0.94
CLCN6-202ENST00000346436 LINC00312Q9Y6C7 94 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 ZIC3O60481 467 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 CLDN18P56856 261 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 EAF1Q96JC9 268 aaPredicted RBP9.17□□□□□ -0.94
CLCN6-202ENST00000346436 MANBALQ9NQG1 85 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 ZNF581Q9P0T4 197 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 NAT8Q9UHE5 227 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 VAX2Q9UIW0 290 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 HSBP1O75506 76 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 SNRPCP09234 159 aaKnown RBP9.17□□□□□ -0.94
CLCN6-202ENST00000346436 SLC35E4Q6ICL7 350 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 H7C1H1 209 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 CD99P14209 185 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 LHX2P50458 406 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 COX19Q49B96 90 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 TOMM20LQ6UXN7 152 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.17□□□□□ -0.94
CLCN6-202ENST00000346436 Q96MF0 132 aa9.17□□□□□ -0.94
CLCN6-202ENST00000346436 PMCHP20382 165 aa9.16□□□□□ -0.94
CLCN6-202ENST00000346436 FAM159AQ6UWV7 190 aa9.16□□□□□ -0.94
CLCN6-202ENST00000346436 PAXXQ9BUH6 204 aa9.16□□□□□ -0.94
CLCN6-202ENST00000346436 NPVFQ9HCQ7 196 aa9.16□□□□□ -0.94
CLCN6-202ENST00000346436 GBGT1Q8N5D6 347 aa9.16□□□□□ -0.94
CLCN6-202ENST00000346436 SIGLECL1Q8N7X8 197 aa9.16□□□□□ -0.94
CLCN6-202ENST00000346436 RFNGQ9Y644 331 aa9.16□□□□□ -0.94
CLCN6-202ENST00000346436 TCL1AP56279 114 aa9.16□□□□□ -0.94
CLCN6-202ENST00000346436 HIST1H3AP68431 136 aa9.16□□□□□ -0.94
CLCN6-202ENST00000346436 ZNF672Q499Z4 452 aaPredicted RBP9.16□□□□□ -0.94
CLCN6-202ENST00000346436 OSR1Q8TAX0 266 aaPredicted RBP9.16□□□□□ -0.94
CLCN6-202ENST00000346436 FBXL7Q9UJT9 491 aa9.16□□□□□ -0.94
CLCN6-202ENST00000346436 CARHSP1Q9Y2V2 147 aaKnown RBP9.16□□□□□ -0.94
CLCN6-202ENST00000346436 DOCK8Q8NF50 2099 aa9.16□□□□□ -0.94
CLCN6-202ENST00000346436 DUSP14O95147 198 aaKnown RBP9.16□□□□□ -0.94
CLCN6-202ENST00000346436 BCL2P10415 239 aa9.16□□□□□ -0.94
CLCN6-202ENST00000346436 DMRTA2Q96SC8 542 aa9.16□□□□□ -0.94
CLCN6-202ENST00000346436 CLDN16Q9Y5I7 305 aa9.16□□□□□ -0.94
CLCN6-202ENST00000346436 IGKV3D-15A0A087WSY6 115 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 IGKV3-15P01624 115 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 FCGR2BP31994 310 aaPredicted RBP9.15□□□□□ -0.94
CLCN6-202ENST00000346436 WFIKKN1Q96NZ8 548 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 TRGV2A0A075B6R0 118 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 A0A087X0M5 115 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 A0A1B0GX30 115 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 RPS20P60866 119 aaKnown RBP9.15□□□□□ -0.94
CLCN6-202ENST00000346436 SUPT4H1P63272 117 aaKnown RBP9.15□□□□□ -0.94
CLCN6-202ENST00000346436 TMEM101Q96IK0 257 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 A6NNC1 897 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 OOSP1A8MZH6 123 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 LEMD1Q68G75 181 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 OR5P3Q8WZ94 311 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 PHLDA3Q9Y5J5 127 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 GVINP1Q7Z2Y8 2422 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 ACACAQ13085 2346 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 TANC1Q9C0D5 1861 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 RNF223E7ERA6 249 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 H0Y980 276 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 LDLRAD4O15165 306 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 CD1BP29016 333 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 PTTG1IPP53801 180 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 HSPE1P61604 102 aaKnown RBP9.15□□□□□ -0.94
CLCN6-202ENST00000346436 WDR73Q6P4I2 378 aa9.15□□□□□ -0.94
CLCN6-202ENST00000346436 KBTBD11O94819 623 aa9.15□□□□□ -0.95
CLCN6-202ENST00000346436 PGA5P0DJD9 388 aa9.15□□□□□ -0.95
CLCN6-202ENST00000346436 LDLRAD2Q5SZI1 272 aa9.15□□□□□ -0.95
CLCN6-202ENST00000346436 SMIM8Q96KF7 97 aa9.15□□□□□ -0.95
CLCN6-202ENST00000346436 DUX3Q96PT4 197 aa9.15□□□□□ -0.95
CLCN6-202ENST00000346436 TM2D1Q9BX74 207 aa9.15□□□□□ -0.95
CLCN6-202ENST00000346436 CACNA1DQ01668 2161 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 TEX50A0A1B0GTY4 177 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 HIST1H1AQ02539 215 aaPredicted RBP9.14□□□□□ -0.95
CLCN6-202ENST00000346436 ACP7Q6ZNF0 438 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 PLSCR4Q9NRQ2 329 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 IQCF6A8MYZ5 107 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 RPL29P47914 159 aaKnown RBP9.14□□□□□ -0.95
CLCN6-202ENST00000346436 RND2P52198 227 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 DLX1P56177 255 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms