RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 OR2H2O95918 312 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 LIPFP07098 398 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 CRYBB3P26998 211 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 NPVFQ9HCQ7 196 aa13.16□□□□□ -0.3
SRPK1-201ENST00000346162 AAMDCQ9H7C9 122 aa13.15□□□□□ -0.3
SRPK1-201ENST00000346162 DLL3Q9NYJ7 618 aa13.15□□□□□ -0.3
SRPK1-201ENST00000346162 SOX21Q9Y651 276 aaPredicted RBP13.15□□□□□ -0.3
SRPK1-201ENST00000346162 C1QTNF9BB2RNN3 333 aa13.15□□□□□ -0.3
SRPK1-201ENST00000346162 SLC25A17O43808 307 aa13.15□□□□□ -0.3
SRPK1-201ENST00000346162 FTH1P19P0C7X4 201 aa13.15□□□□□ -0.3
SRPK1-201ENST00000346162 TSPOP30536 169 aa13.15□□□□□ -0.3
SRPK1-201ENST00000346162 PRDX2P32119 198 aa13.15□□□□□ -0.3
SRPK1-201ENST00000346162 ANAPC13Q9BS18 74 aa13.15□□□□□ -0.3
SRPK1-201ENST00000346162 C19orf67A6NJJ6 358 aa13.15□□□□□ -0.3
SRPK1-201ENST00000346162 PGLYRP1O75594 196 aaPredicted RBP13.15□□□□□ -0.3
SRPK1-201ENST00000346162 CFHR1Q03591 330 aa13.15□□□□□ -0.3
SRPK1-201ENST00000346162 STPG1Q5TH74 334 aa13.15□□□□□ -0.3
SRPK1-201ENST00000346162 STXBP6Q8NFX7 210 aa13.15□□□□□ -0.3
SRPK1-201ENST00000346162 SPSB4Q96A44 273 aa13.15□□□□□ -0.3
SRPK1-201ENST00000346162 MRPL13Q9BYD1 178 aaKnown RBP13.15□□□□□ -0.3
SRPK1-201ENST00000346162 ZNF257Q9Y2Q1 563 aa13.15□□□□□ -0.3
SRPK1-201ENST00000346162 IGHV1-69-2A0A0G2JMI3 117 aa13.15□□□□□ -0.31
SRPK1-201ENST00000346162 ODAMA1E959 279 aa13.15□□□□□ -0.31
SRPK1-201ENST00000346162 SP9P0CG40 484 aa13.15□□□□□ -0.31
SRPK1-201ENST00000346162 IGFBP3P17936 291 aaPredicted RBP13.15□□□□□ -0.31
SRPK1-201ENST00000346162 MIC13Q5XKP0 118 aa13.15□□□□□ -0.31
SRPK1-201ENST00000346162 ZNF826PQ6ZT77 177 aa13.15□□□□□ -0.31
SRPK1-201ENST00000346162 FAM169BQ8N8A8 192 aa13.15□□□□□ -0.31
SRPK1-201ENST00000346162 NBASA2RRP1 2371 aa13.14□□□□□ -0.31
SRPK1-201ENST00000346162 IGHV3OR15-7A0A075B7D8 119 aa13.14□□□□□ -0.31
SRPK1-201ENST00000346162 RPL11P62913 178 aaKnown RBP13.14□□□□□ -0.31
SRPK1-201ENST00000346162 KCNMB1Q16558 191 aa13.14□□□□□ -0.31
SRPK1-201ENST00000346162 OR4F17Q8NGA8 305 aa13.14□□□□□ -0.31
SRPK1-201ENST00000346162 PKIBQ9C010 78 aa13.14□□□□□ -0.31
SRPK1-201ENST00000346162 TSC2P49815 1807 aa13.14□□□□□ -0.31
SRPK1-201ENST00000346162 PPIHO43447 177 aaKnown RBP13.14□□□□□ -0.31
SRPK1-201ENST00000346162 COX7A1P24310 79 aa13.14□□□□□ -0.31
SRPK1-201ENST00000346162 SLC25A53Q5H9E4 307 aa13.14□□□□□ -0.31
SRPK1-201ENST00000346162 C5orf17Q8NAS9 161 aa13.14□□□□□ -0.31
SRPK1-201ENST00000346162 OR5A1Q8NGJ0 315 aa13.14□□□□□ -0.31
SRPK1-201ENST00000346162 VSTM2AQ8TAG5 236 aa13.14□□□□□ -0.31
SRPK1-201ENST00000346162 HIST1H4GQ99525 98 aa13.14□□□□□ -0.31
SRPK1-201ENST00000346162 FNDC1Q4ZHG4 1894 aaPredicted RBP13.14□□□□□ -0.31
SRPK1-201ENST00000346162 LRRC75BQ2VPJ9 315 aa13.14□□□□□ -0.31
SRPK1-201ENST00000346162 FADS6Q8N9I5 356 aa13.14□□□□□ -0.31
SRPK1-201ENST00000346162 LSM10Q969L4 123 aaKnown RBP13.14□□□□□ -0.31
SRPK1-201ENST00000346162 NAA38Q9BRA0 125 aaKnown RBP13.14□□□□□ -0.31
SRPK1-201ENST00000346162 ONECUT1Q9UBC0 465 aa13.14□□□□□ -0.31
SRPK1-201ENST00000346162 CACNA1HO95180 2353 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 ESDP10768 282 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 CEACAM8P31997 349 aaPredicted RBP13.13□□□□□ -0.31
SRPK1-201ENST00000346162 ATP1A1-AS1Q5TC04 95 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 ZNF441Q8N8Z8 693 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 PTPRDP23468 1912 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 PRR33A8MZF0 331 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 TMEM238C9JI98 176 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 RBFOX2O43251 390 aaKnown RBP eCLIP13.13□□□□□ -0.31
SRPK1-201ENST00000346162 KLF7O75840 302 aaPredicted RBP13.13□□□□□ -0.31
SRPK1-201ENST00000346162 ORM2P19652 201 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 ATP5G3P48201 142 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 GNB2P62879 340 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 THYN1Q9P016 225 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 AKAP6Q13023 2319 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 ESPL1Q14674 2120 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 SAXO1Q8IYX7 474 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 ZNF837Q96EG3 531 aaPredicted RBP13.13□□□□□ -0.31
SRPK1-201ENST00000346162 UBTD1Q9HAC8 227 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 RFNGQ9Y644 331 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 MDC1Q14676 2089 aaKnown RBP13.13□□□□□ -0.31
SRPK1-201ENST00000346162 SCN8AQ9UQD0 1980 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 C16orf97H3BN30 126 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 CD3EP07766 207 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 TDGF1P13385 188 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 PAX2Q02962 417 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 CENPWQ5EE01 88 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 ASPHD2Q6ICH7 369 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 TNFRSF14Q92956 283 aa13.13□□□□□ -0.31
SRPK1-201ENST00000346162 FLYWCH2Q96CP2 140 aaKnown RBP13.13□□□□□ -0.31
SRPK1-201ENST00000346162 MGST3O14880 152 aa13.12□□□□□ -0.31
SRPK1-201ENST00000346162 STAG3L3P0CL85 134 aa13.12□□□□□ -0.31
SRPK1-201ENST00000346162 SUPT4H1P63272 117 aaKnown RBP13.12□□□□□ -0.31
SRPK1-201ENST00000346162 FGFRL1Q8N441 504 aa13.12□□□□□ -0.31
SRPK1-201ENST00000346162 AHRRA9YTQ3 701 aa13.12□□□□□ -0.31
SRPK1-201ENST00000346162 RND2P52198 227 aa13.12□□□□□ -0.31
SRPK1-201ENST00000346162 ACTL10Q5JWF8 245 aa13.12□□□□□ -0.31
SRPK1-201ENST00000346162 RND1Q92730 232 aa13.12□□□□□ -0.31
SRPK1-201ENST00000346162 PGPEP1LA6NFU8 196 aa13.12□□□□□ -0.31
SRPK1-201ENST00000346162 RBP4P02753 201 aa13.12□□□□□ -0.31
SRPK1-201ENST00000346162 ZNF818PQ6ZRF7 136 aa13.12□□□□□ -0.31
SRPK1-201ENST00000346162 RNASE8Q8TDE3 154 aaKnown RBP13.12□□□□□ -0.31
SRPK1-201ENST00000346162 SIGLEC12Q96PQ1 595 aa13.12□□□□□ -0.31
SRPK1-201ENST00000346162 NCBP2LA6PVI3 153 aaKnown RBP13.12□□□□□ -0.31
SRPK1-201ENST00000346162 OR4D5Q8NGN0 318 aa13.12□□□□□ -0.31
SRPK1-201ENST00000346162 FAM216AQ8WUB2 273 aa13.12□□□□□ -0.31
SRPK1-201ENST00000346162 SNCGO76070 127 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 CLDN14O95500 239 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 CELA3AP09093 270 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 ACP1P24666 158 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 LCN12Q6JVE5 192 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 SYNGR3O43761 229 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms