RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 A0A1B0GUT8 65 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 MPV17P39210 176 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 CEACAM3P40198 252 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 GFRA1P56159 465 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 SFTA2Q6UW10 78 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 MIR17HGQ75NE6 70 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 CRIM1Q9NZV1 1036 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 FBLN5Q9UBX5 448 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 RAXQ9Y2V3 346 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 ADAMTSL1Q8N6G6 1762 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 IGHV1-69-2A0A0G2JMI3 117 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 GREM1O60565 184 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 IGHV3-48P01763 117 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 MAGEA5P43359 124 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 ID3Q02535 119 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 TMEM186Q96B77 213 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 SRSF4Q08170 494 aaKnown RBP10.27□□□□□ -0.77
COL12A1-202ENST00000345356 OR10W1Q8NGF6 305 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 TRBV20OR9-2A0A075B6H5 130 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 TMEM50AO95807 157 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 FOXL1Q12952 345 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 LCN12Q6JVE5 192 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 NPIPB3Q92617 1050 aa10.27□□□□□ -0.77
COL12A1-202ENST00000345356 A0A0G2JLM5 398 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 LGALS7P47929 136 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 HSD52Q0P140 79 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 OCIAD2Q56VL3 154 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 DNAJC13O75165 2243 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 IGKV3-7A0A075B6H7 116 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 A0A0A6YYD4 124 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 TRAV1-1A0A0B4J248 108 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 FAM181BA6NEQ2 426 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 NPIPB13A6NJU9 1138 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 NPIPB4C9JG80 1138 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 K7EQS6 105 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 LINC00305Q7Z4B0 112 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 OSTCQ9NRP0 149 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 PPIAL4EA0A075B759 164 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 CD55P08174 381 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 PPIAL4FP0DN26 164 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 ZNF146Q15072 292 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 PSMG4Q5JS54 123 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 TMEM78Q5T7P6 136 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 PPIAL4AQ9Y536 164 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 MCM3APO60318 1980 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 IGKV1D-8A0A087WSZ0 117 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 SEC16AO15027 2179 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 FTH1P19P0C7X4 201 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 TIMP3P35625 211 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 MESP2Q0VG99 397 aa10.26□□□□□ -0.77
COL12A1-202ENST00000345356 A0A1B0GWJ7 208 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 C3orf79P0CE67 100 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 CST9LQ9H4G1 147 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 FBXW9Q5XUX1 488 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 CTSBP07858 339 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 CYSLTR1Q9Y271 337 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 CACNA1IQ9P0X4 2223 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 IGKV1D-13A0A0B4J2D9 117 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 C17orf98A8MV24 154 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 TNFSF15O95150 251 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 IGKV1-13P0DP09 117 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 FCGR2BP31994 310 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-202ENST00000345356 SSPNQ14714 243 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 GAGE13Q4V321 117 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 SPEM1Q8N4L4 309 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 GCSAMQ8N6F7 178 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 WDR31Q8NA23 367 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 ZNF479Q96JC4 524 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 DMRTA2Q96SC8 542 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 DLX6P56179 175 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 TRA2AQ13595 282 aaKnown RBP eCLIP10.25□□□□□ -0.77
COL12A1-202ENST00000345356 GCSAMLQ5JQS6 135 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 BHLHA15Q7RTS1 189 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-202ENST00000345356 RNASEH2CQ8TDP1 164 aaKnown RBP10.25□□□□□ -0.77
COL12A1-202ENST00000345356 LEAP2Q969E1 77 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 NCOR1P1Q9H4R4 102 aa10.25□□□□□ -0.77
COL12A1-202ENST00000345356 RP1L1Q8IWN7 2480 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-202ENST00000345356 ITGB1BP1O14713 200 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 LYPD3O95274 346 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 NXPH1P58417 271 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 LINC01551Q86U37 167 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 LHFPL1Q86WI0 220 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 PRDM14Q9GZV8 571 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 MS4A6AQ9H2W1 248 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 C20orf144Q9BQM9 153 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 AICDAQ9GZX7 198 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 A0A087X0K7 114 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 MUC21A0A0G2JKD1 596 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 MUC21A0A140T8X8 626 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 ATP5LO75964 103 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 HTN1P15515 57 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 MUC21Q5SSG8 566 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 PLPPR1Q8TBJ4 325 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 TMUB1Q9BVT8 246 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 IGHV3-72A0A0B4J1Y9 119 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 CGB1A6NKQ9 187 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 MOSP00540 346 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 NBEAP1P0C6P0 100 aa10.24□□□□□ -0.77
COL12A1-202ENST00000345356 INO80CQ6PI98 192 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-202ENST00000345356 TMEM74BQ9NUR3 256 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms