RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 C5orf56Q8N8D9 126 aa10.92□□□□□ -0.66
TPM4-202ENST00000344824 OR5M8Q8NGP6 311 aa10.92□□□□□ -0.66
TPM4-202ENST00000344824 OSR1Q8TAX0 266 aaPredicted RBP10.92□□□□□ -0.66
TPM4-202ENST00000344824 GPR146Q96CH1 333 aa10.92□□□□□ -0.66
TPM4-202ENST00000344824 WDR89Q96FK6 387 aaPredicted RBP10.92□□□□□ -0.66
TPM4-202ENST00000344824 OR10C1Q96KK4 312 aa10.92□□□□□ -0.66
TPM4-202ENST00000344824 TMEM140Q9NV12 185 aa10.92□□□□□ -0.66
TPM4-202ENST00000344824 GSKIPQ9P0R6 139 aa10.92□□□□□ -0.66
TPM4-202ENST00000344824 NSG2Q9Y328 171 aa10.92□□□□□ -0.66
TPM4-202ENST00000344824 TMED3Q9Y3Q3 217 aa10.92□□□□□ -0.66
TPM4-202ENST00000344824 DUXBA0A1W2PPF3 345 aa10.91□□□□□ -0.66
TPM4-202ENST00000344824 FGF16O43320 207 aa10.91□□□□□ -0.66
TPM4-202ENST00000344824 SLC25A17O43808 307 aa10.91□□□□□ -0.66
TPM4-202ENST00000344824 SAA1P0DJI8 122 aaPredicted RBP10.91□□□□□ -0.66
TPM4-202ENST00000344824 H2BFSP57053 126 aa10.91□□□□□ -0.66
TPM4-202ENST00000344824 IAH1Q2TAA2 248 aaPredicted RBP10.91□□□□□ -0.66
TPM4-202ENST00000344824 THOC7Q6I9Y2 204 aaKnown RBP10.91□□□□□ -0.66
TPM4-202ENST00000344824 OR5AU1Q8NGC0 362 aa10.91□□□□□ -0.66
TPM4-202ENST00000344824 RHOVQ96L33 236 aa10.91□□□□□ -0.66
TPM4-202ENST00000344824 CITED2Q99967 270 aaPredicted RBP10.91□□□□□ -0.66
TPM4-202ENST00000344824 ZNF436Q9C0F3 470 aaPredicted RBP10.91□□□□□ -0.66
TPM4-202ENST00000344824 WNT10AQ9GZT5 417 aa10.91□□□□□ -0.66
TPM4-202ENST00000344824 CACNG5Q9UF02 275 aa10.91□□□□□ -0.66
TPM4-202ENST00000344824 LINC00527Q9UJ94 153 aa10.91□□□□□ -0.66
TPM4-202ENST00000344824 NOTCH1P46531 2555 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 PIGBOS1A0A0B4J2F0 54 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 PLXNB1O43157 2135 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 RBMXL2O75526 392 aaKnown RBP10.9□□□□□ -0.66
TPM4-202ENST00000344824 CCNKO75909 580 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 SCGB1D2O95969 90 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 OR9G9P0C7N8 305 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 OR2B8PP59922 312 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 MMDQ15546 238 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 VMA21Q3ZAQ7 101 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 NMSQ5H8A3 153 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 OR4A47Q6IF82 309 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 C10orf99Q6UWK7 81 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 SLC35E3Q7Z769 313 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 AKAP14Q86UN6 197 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 OR4X2Q8NGF9 303 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 LSM10Q969L4 123 aaKnown RBP10.9□□□□□ -0.66
TPM4-202ENST00000344824 NOL4LQ96MY1 436 aaPredicted RBP10.9□□□□□ -0.66
TPM4-202ENST00000344824 TSNAXQ99598 290 aaKnown RBP10.9□□□□□ -0.66
TPM4-202ENST00000344824 RANGRFQ9HD47 186 aaPredicted RBP10.9□□□□□ -0.66
TPM4-202ENST00000344824 TPSG1Q9NRR2 321 aa10.9□□□□□ -0.66
TPM4-202ENST00000344824 TRAV3A0A0B4J244 114 aa10.89□□□□□ -0.67
TPM4-202ENST00000344824 PFDN1O60925 122 aa10.89□□□□□ -0.67
TPM4-202ENST00000344824 IGLV2-23P01705 113 aa10.89□□□□□ -0.67
TPM4-202ENST00000344824 TRAPPC2P0DI81 140 aa10.89□□□□□ -0.67
TPM4-202ENST00000344824 TRAPPC2BP0DI82 140 aa10.89□□□□□ -0.67
TPM4-202ENST00000344824 F2RL1P55085 397 aa10.89□□□□□ -0.67
TPM4-202ENST00000344824 PLGLAQ15195 96 aa10.89□□□□□ -0.67
TPM4-202ENST00000344824 Q6ZRM9 215 aa10.89□□□□□ -0.67
TPM4-202ENST00000344824 ZBTB8BQ8NAP8 495 aaPredicted RBP10.89□□□□□ -0.67
TPM4-202ENST00000344824 OR1S1Q8NH92 325 aa10.89□□□□□ -0.67
TPM4-202ENST00000344824 C2orf50Q96LR7 162 aa10.89□□□□□ -0.67
TPM4-202ENST00000344824 CLCC1Q96S66 551 aa10.89□□□□□ -0.67
TPM4-202ENST00000344824 SPIN2AQ99865 258 aa10.89□□□□□ -0.67
TPM4-202ENST00000344824 RASL11BQ9BPW5 248 aa10.89□□□□□ -0.67
TPM4-202ENST00000344824 SPIN2BQ9BPZ2 258 aa10.89□□□□□ -0.67
TPM4-202ENST00000344824 METTL1Q9UBP6 276 aaKnown RBP10.89□□□□□ -0.67
TPM4-202ENST00000344824 PSMB11A5LHX3 300 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 SMLR1H3BR10 107 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 OR2A4O95047 310 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 P0C879 139 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 HLA-GP17693 338 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 LGALS7P47929 136 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 CD300CQ08708 224 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 EBI3Q14213 229 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 SMCO1Q147U7 214 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 PSG5Q15238 335 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 LRRC37A5PQ49AS3 106 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 ZNF329Q86UD4 541 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 NDUFA11Q86Y39 141 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 FOXRED2Q8IWF2 684 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 Q8N6K4 173 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 OR4A16Q8NH70 328 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 FYTTD1Q96QD9 318 aaKnown RBP10.88□□□□□ -0.67
TPM4-202ENST00000344824 OR2A7Q96R45 310 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 AIFM2Q9BRQ8 373 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 FBXL15Q9H469 300 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 KIAA1456Q9P272 454 aa10.88□□□□□ -0.67
TPM4-202ENST00000344824 TCRBV4S1A1TA0A5B7 111 aa10.87□□□□□ -0.67
TPM4-202ENST00000344824 NBR2O15453 112 aa10.87□□□□□ -0.67
TPM4-202ENST00000344824 SNAPC5O75971 98 aa10.87□□□□□ -0.67
TPM4-202ENST00000344824 KBTBD11O94819 623 aa10.87□□□□□ -0.67
TPM4-202ENST00000344824 PF4V1P10720 104 aa10.87□□□□□ -0.67
TPM4-202ENST00000344824 MYOD1P15172 320 aa10.87□□□□□ -0.67
TPM4-202ENST00000344824 S100A10P60903 97 aa10.87□□□□□ -0.67
TPM4-202ENST00000344824 UBE2KP61086 200 aa10.87□□□□□ -0.67
TPM4-202ENST00000344824 POU2AF1Q16633 256 aa10.87□□□□□ -0.67
TPM4-202ENST00000344824 Q8N9W7 124 aa10.87□□□□□ -0.67
TPM4-202ENST00000344824 QTRT1Q9BXR0 403 aaKnown RBP10.87□□□□□ -0.67
TPM4-202ENST00000344824 MEGF8Q7Z7M0 2845 aa10.87□□□□□ -0.67
TPM4-202ENST00000344824 A0A1B0GU03 582 aa10.86□□□□□ -0.67
TPM4-202ENST00000344824 UPK2O00526 184 aa10.86□□□□□ -0.67
TPM4-202ENST00000344824 RRHO14718 337 aa10.86□□□□□ -0.67
TPM4-202ENST00000344824 OPN1MWP04001 364 aa10.86□□□□□ -0.67
TPM4-202ENST00000344824 GIPP09681 153 aaPredicted RBP10.86□□□□□ -0.67
TPM4-202ENST00000344824 OPN1MW2P0DN77 364 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms