RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ZNF137PP52743 207 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 ADIPOQQ15848 244 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 VKORC1L1Q8N0U8 176 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 RAX2Q96IS3 184 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 NAT8Q9UHE5 227 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 SEC14L6B5MCN3 397 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 TMEM178BH3BS89 294 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 RPL7P18124 248 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 CEACAM8P31997 349 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 PLPPR1Q8TBJ4 325 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 SMIM8Q96KF7 97 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 NEURL2Q9BR09 285 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 MRPL20Q9BYC9 149 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 FAM215AQ9Y5M1 114 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 HELTA6NFD8 242 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 NDUFS8O00217 210 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 SLC31A2O15432 143 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 VDAC2P45880 294 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 PNRC1Q12796 327 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 OR2T8A6NH00 312 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 REG1AP05451 166 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 FCGR2BP31994 310 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 PSG9Q00887 426 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 ZNF497Q6ZNH5 498 aa13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 LYRM2Q9NU23 88 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-201ENST00000344626 RAB5AP20339 215 aa13.71□□□□□ -0.21
SMARCA4-201ENST00000344626 CLDN34H7C241 214 aa13.71□□□□□ -0.21
SMARCA4-201ENST00000344626 NHLH2Q02577 135 aa13.71□□□□□ -0.21
SMARCA4-201ENST00000344626 SLC25A33Q9BSK2 321 aa13.71□□□□□ -0.21
SMARCA4-201ENST00000344626 MAS1LP35410 378 aa13.71□□□□□ -0.21
SMARCA4-201ENST00000344626 RANP62826 216 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-201ENST00000344626 C3orf36Q3SXR2 165 aa13.71□□□□□ -0.21
SMARCA4-201ENST00000344626 FAM74A3Q4VXF1 159 aa13.71□□□□□ -0.21
SMARCA4-201ENST00000344626 SPSB4Q96A44 273 aa13.71□□□□□ -0.21
SMARCA4-201ENST00000344626 C19orf24Q9BVV8 132 aa13.71□□□□□ -0.21
SMARCA4-201ENST00000344626 NBR2O15453 112 aa13.71□□□□□ -0.22
SMARCA4-201ENST00000344626 HIST3H3Q16695 136 aa13.71□□□□□ -0.22
SMARCA4-201ENST00000344626 GOLT1BQ9Y3E0 138 aa13.71□□□□□ -0.22
SMARCA4-201ENST00000344626 IGHV3OR16-12A0A075B7B8 117 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 IGKV1-9A0A0C4DH69 117 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 NTF3P20783 257 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 ST6GAL2Q96JF0 529 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 TSTD3H0UI37 97 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 ETV2O00321 342 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 PAGE4O60829 102 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 SRSF10O75494 262 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 OR2J3O76001 311 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 AANATQ16613 207 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 NHLRC2Q8NBF2 726 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 ZNF319Q9P2F9 582 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 IL36RNQ9UBH0 155 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 UFC1Q9Y3C8 167 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 NSUN5P1Q3KNT7 163 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 SIGLECL1Q8N7X8 197 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 LTBP2Q14767 1821 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 J3QRE1 110 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 SNRPD3P62318 126 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 FAM209BQ5JX69 171 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 PQLC2Q6ZP29 291 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 DNAJC4Q9NNZ3 241 aa13.7□□□□□ -0.22
SMARCA4-201ENST00000344626 COL8A2P25067 703 aa13.69□□□□□ -0.22
SMARCA4-201ENST00000344626 GRNP28799 593 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-201ENST00000344626 FBXL7Q9UJT9 491 aa13.69□□□□□ -0.22
SMARCA4-201ENST00000344626 RGS13O14921 159 aa13.69□□□□□ -0.22
SMARCA4-201ENST00000344626 RIGQ13278 110 aa13.69□□□□□ -0.22
SMARCA4-201ENST00000344626 WDR73Q6P4I2 378 aa13.69□□□□□ -0.22
SMARCA4-201ENST00000344626 TRBV6-7A0A0A0MS04 114 aa13.69□□□□□ -0.22
SMARCA4-201ENST00000344626 IGKV3-15P01624 115 aa13.69□□□□□ -0.22
SMARCA4-201ENST00000344626 DLK1P80370 383 aa13.69□□□□□ -0.22
SMARCA4-201ENST00000344626 DDB2Q92466 427 aa13.69□□□□□ -0.22
SMARCA4-201ENST00000344626 FOXL2NBQ6ZUU3 175 aa13.69□□□□□ -0.22
SMARCA4-201ENST00000344626 TRAV20A0A0B4J274 112 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 SELLP14151 372 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 TSPOP30536 169 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 RRN3P1Q2M238 152 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 WDR25Q64LD2 544 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 OR4A47Q6IF82 309 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 LINC01356Q8N9X3 169 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 TXNDC17Q9BRA2 123 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 ELOA3CA0A087WX78 387 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 IGHV3-11P01762 117 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 HIST1H3AP68431 136 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 DHRS11Q6UWP2 260 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 SOSTQ9BQB4 213 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 ZNF586Q9NXT0 402 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 MORN2Q502X0 79 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 C12orf54Q6X4T0 127 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 TAF15Q92804 592 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 NAT8BQ9UHF3 227 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 TRAPPC1Q9Y5R8 145 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 ZNF250P15622 560 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 DLX6P56179 175 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 BSXQ3C1V8 233 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 COX19Q49B96 90 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 OR5AU1Q8NGC0 362 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 ANAPC16Q96DE5 110 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 NOL4LQ96MY1 436 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 TRAV24A0A0B4J272 114 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 TNFSF13O75888 250 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 DGAT2L7PQ6IED9 249 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms