RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 DHFRP00374 187 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 RLN1P04808 185 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 HNRNPCP07910 306 aaKnown RBP eCLIP12.35□□□□□ -0.432e-8■■■■□ 21.9
ATG4B-201ENST00000344376 ERVK-16P61578 105 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 ATP5G2Q06055 141 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 LPCAT3Q6P1A2 487 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 LYSMD2Q8IV50 215 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 NECAP1Q8NC96 275 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 DMBX1Q8NFW5 382 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 C15orf40Q8WUR7 153 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 B9D2Q9BPU9 175 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 FXYD6Q9H0Q3 95 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 HMX3A6NHT5 357 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 NPIPB5A8MRT5 1133 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 TEX22C9J3V5 150 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 GPR31O00270 319 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 PRH1P02810 166 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 EXOSC2Q13868 293 aaKnown RBP12.35□□□□□ -0.43
ATG4B-201ENST00000344376 POU2AF1Q16633 256 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 TATDN3Q17R31 274 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 FAM209BQ5JX69 171 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 SLC2A9Q9NRM0 540 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 EXTL2Q9UBQ6 330 aa12.35□□□□□ -0.43
ATG4B-201ENST00000344376 TRBV9A0A0B4J1U6 114 aa12.34□□□□□ -0.43
ATG4B-201ENST00000344376 PGLYRP1O75594 196 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-201ENST00000344376 TPPPO94811 219 aa12.34□□□□□ -0.43
ATG4B-201ENST00000344376 S1PR2O95136 353 aa12.34□□□□□ -0.43
ATG4B-201ENST00000344376 IL6RP08887 468 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-201ENST00000344376 ZNF735P0CB33 412 aa12.34□□□□□ -0.43
ATG4B-201ENST00000344376 F2RP25116 425 aa12.34□□□□□ -0.43
ATG4B-201ENST00000344376 RPEL1Q2QD12 228 aa12.34□□□□□ -0.43
ATG4B-201ENST00000344376 CENPSQ8N2Z9 138 aa12.34□□□□□ -0.43
ATG4B-201ENST00000344376 RSRP1Q9BUV0 290 aa12.34□□□□□ -0.43
ATG4B-201ENST00000344376 COMMD5Q9GZQ3 224 aa12.34□□□□□ -0.43
ATG4B-201ENST00000344376 TMEM140Q9NV12 185 aa12.34□□□□□ -0.43
ATG4B-201ENST00000344376 KLF5Q13887 457 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-201ENST00000344376 OXA1LQ15070 435 aa12.33□□□□□ -0.44
ATG4B-201ENST00000344376 UPK2O00526 184 aa12.32□□□□□ -0.44
ATG4B-201ENST00000344376 RBMXL2O75526 392 aaKnown RBP12.32□□□□□ -0.44
ATG4B-201ENST00000344376 OR2J3O76001 311 aa12.32□□□□□ -0.44
ATG4B-201ENST00000344376 IFNA6P05013 189 aa12.32□□□□□ -0.44
ATG4B-201ENST00000344376 FGF2P09038 288 aa12.32□□□□□ -0.44
ATG4B-201ENST00000344376 DEFA4P12838 97 aa12.32□□□□□ -0.44
ATG4B-201ENST00000344376 PTBP1P26599 531 aaKnown RBP eCLIP12.32□□□□□ -0.446e-9■■■■□ 20.1
ATG4B-201ENST00000344376 PSMB6P28072 239 aa12.32□□□□□ -0.44
ATG4B-201ENST00000344376 TNFSF8P32971 234 aa12.32□□□□□ -0.44
ATG4B-201ENST00000344376 BCAP31P51572 246 aa12.32□□□□□ -0.44
ATG4B-201ENST00000344376 SYNJ2BPP57105 145 aa12.32□□□□□ -0.44
ATG4B-201ENST00000344376 TRIM16LQ309B1 348 aa12.32□□□□□ -0.44
ATG4B-201ENST00000344376 C15orf32Q32M92 178 aa12.32□□□□□ -0.44
ATG4B-201ENST00000344376 RNASE12Q5GAN4 147 aaKnown RBP12.32□□□□□ -0.44
ATG4B-201ENST00000344376 VAX1Q5SQQ9 334 aa12.32□□□□□ -0.44
ATG4B-201ENST00000344376 OR9G4Q8NGQ1 327 aa12.32□□□□□ -0.44
ATG4B-201ENST00000344376 MIXL1Q9H2W2 232 aa12.32□□□□□ -0.44
ATG4B-201ENST00000344376 LSM4Q9Y4Z0 139 aaKnown RBP12.32□□□□□ -0.44
ATG4B-201ENST00000344376 MARCH11A6NNE9 402 aa12.31□□□□□ -0.44
ATG4B-201ENST00000344376 CTDSP2O14595 271 aa12.31□□□□□ -0.44
ATG4B-201ENST00000344376 RGS5O15539 181 aa12.31□□□□□ -0.44
ATG4B-201ENST00000344376 TRBV12-3P01733 135 aa12.31□□□□□ -0.44
ATG4B-201ENST00000344376 AREGP15514 252 aa12.31□□□□□ -0.44
ATG4B-201ENST00000344376 SPNP16150 400 aa12.31□□□□□ -0.44
ATG4B-201ENST00000344376 HIST1H1BP16401 226 aaKnown RBP12.31□□□□□ -0.44
ATG4B-201ENST00000344376 PHLDA2Q53GA4 152 aa12.31□□□□□ -0.44
ATG4B-201ENST00000344376 RNASE10Q5GAN6 216 aaKnown RBP12.31□□□□□ -0.44
ATG4B-201ENST00000344376 SLC38A6Q8IZM9 456 aa12.31□□□□□ -0.44
ATG4B-201ENST00000344376 ZBTB8BQ8NAP8 495 aaPredicted RBP12.31□□□□□ -0.44
ATG4B-201ENST00000344376 SRSF8Q9BRL6 282 aaKnown RBP12.31□□□□□ -0.44
ATG4B-201ENST00000344376 FBXL7Q9UJT9 491 aa12.31□□□□□ -0.44
ATG4B-201ENST00000344376 TNCP24821 2201 aa12.31□□□□□ -0.44
ATG4B-201ENST00000344376 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.3□□□□□ -0.44
ATG4B-201ENST00000344376 E7EUB6 86 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 CRYGCP07315 174 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 GP9P14770 177 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 TBPP20226 339 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 LPAR6P43657 344 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 DEFA1P59665 94 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 DEFA3P59666 94 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 OR2B8PP59922 312 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 IFITM3Q01628 133 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 THOC7Q6I9Y2 204 aaKnown RBP12.3□□□□□ -0.44
ATG4B-201ENST00000344376 QTRT1Q9BXR0 403 aaKnown RBP12.3□□□□□ -0.44
ATG4B-201ENST00000344376 PEMTQ9UBM1 199 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 SMAD5-AS1Q9Y6J3 95 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 A0A1B0GW64 132 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 M0QYG6 137 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 CYB5BO43169 146 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 PTTG1O95997 202 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 MYOD1P15172 320 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 RPA2P15927 270 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 CTRB1P17538 263 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 UCP3P55916 312 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 CTRB2Q6GPI1 263 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 OR52I2Q8NH67 350 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 FCAMRQ8WWV6 532 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 FAM212BQ9NTI7 297 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-201ENST00000344376 V9GYH0 126 aa12.3□□□□□ -0.44
ATG4B-201ENST00000344376 TRAV3A0A0B4J244 114 aa12.29□□□□□ -0.44
ATG4B-201ENST00000344376 BMPR1BO00238 502 aa12.29□□□□□ -0.44
ATG4B-201ENST00000344376 SNAPC5O75971 98 aa12.29□□□□□ -0.44
ATG4B-201ENST00000344376 KRASP01116 189 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms