RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 IGKV1-16P04430 117 aa6.54□□□□□ -1.36
HMGCR-202ENST00000343975 OR8U8P0C7N1 319 aa6.54□□□□□ -1.36
HMGCR-202ENST00000343975 IFITM3Q01628 133 aa6.54□□□□□ -1.36
HMGCR-202ENST00000343975 CD300CQ08708 224 aa6.54□□□□□ -1.36
HMGCR-202ENST00000343975 PRSS8Q16651 343 aa6.54□□□□□ -1.36
HMGCR-202ENST00000343975 SRSF12Q8WXF0 261 aaKnown RBP6.54□□□□□ -1.36
HMGCR-202ENST00000343975 TMEM158Q8WZ71 300 aa6.54□□□□□ -1.36
HMGCR-202ENST00000343975 DPF1Q92782 380 aa6.54□□□□□ -1.36
HMGCR-202ENST00000343975 SLC25A31Q9H0C2 315 aa6.54□□□□□ -1.36
HMGCR-202ENST00000343975 APCP25054 2843 aa6.54□□□□□ -1.36
HMGCR-202ENST00000343975 CCSO14618 274 aa6.54□□□□□ -1.36
HMGCR-202ENST00000343975 C1orf229Q6ZS94 237 aaPredicted RBP6.54□□□□□ -1.36
HMGCR-202ENST00000343975 ODF3L1Q8IXM7 274 aa6.54□□□□□ -1.36
HMGCR-202ENST00000343975 SEC22AQ96IW7 307 aa6.54□□□□□ -1.36
HMGCR-202ENST00000343975 TMEM56-RWDD3S4R434 201 aa6.54□□□□□ -1.36
HMGCR-202ENST00000343975 A6NDX4 124 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 FAM90A26D6RGX4 464 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 HIST1H1BP16401 226 aaKnown RBP6.53□□□□□ -1.36
HMGCR-202ENST00000343975 RAP2BP61225 183 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 UBA52P62987 128 aaKnown RBP6.53□□□□□ -1.36
HMGCR-202ENST00000343975 RAB31Q13636 194 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 ZNF562Q6V9R5 426 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 C12orf54Q6X4T0 127 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 STRAPQ9Y3F4 350 aaKnown RBP6.53□□□□□ -1.36
HMGCR-202ENST00000343975 SMCO3A2RU48 225 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 NXPH3O95157 252 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 FABP1P07148 127 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 AP2S1P53680 142 aaPredicted RBP6.53□□□□□ -1.36
HMGCR-202ENST00000343975 RRAS2P62070 204 aaPredicted RBP6.53□□□□□ -1.36
HMGCR-202ENST00000343975 ETFRF1Q6IPR1 90 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 ASB13Q8WXK3 278 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 DCUN1D4Q92564 292 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 AJUBAQ96IF1 538 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 SLC35E1Q96K37 410 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 RAB40CQ96S21 281 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 GAR1Q9NY12 217 aaKnown RBP6.53□□□□□ -1.36
HMGCR-202ENST00000343975 ZMAT5Q9UDW3 170 aaKnown RBP6.53□□□□□ -1.36
HMGCR-202ENST00000343975 WSB1Q9Y6I7 421 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 PSMB11A5LHX3 300 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 CORTO00230 105 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 CHST1O43916 411 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 ADAP1O75689 374 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 HLA-DRB1P01911 266 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 LINC00205P59089 165 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 HBG1P69891 147 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 HBG2P69892 147 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 CX3CL1P78423 397 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 LILRB2Q8N423 598 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 GPR146Q96CH1 333 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 ZNF430Q9H8G1 570 aaPredicted RBP6.53□□□□□ -1.36
HMGCR-202ENST00000343975 PRR13Q9NZ81 148 aa6.53□□□□□ -1.36
HMGCR-202ENST00000343975 TRAV41A0A0B4J266 112 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 A0A0G2JLM5 398 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 SYNGR2O43760 224 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 RNASE1P07998 156 aaKnown RBP6.52□□□□□ -1.37
HMGCR-202ENST00000343975 S100A7P31151 101 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 COMMD1Q8N668 190 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 C3orf56Q8N813 242 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 DTD1Q8TEA8 209 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 TMEM230Q96A57 120 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 PFDN2Q9UHV9 154 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 MSGN1A6NI15 193 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 C15orf61A6NNL5 157 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 CLDN34H7C241 214 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 FSHBP01225 129 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 BTCP35070 178 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 ATP5IP56385 69 aaPredicted RBP6.52□□□□□ -1.37
HMGCR-202ENST00000343975 CD83Q01151 205 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 POU2AF1Q16633 256 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 ANKRD55Q3KP44 614 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 ZFP69Q49AA0 526 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 SPANXN5Q5MJ07 72 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 DYNAPQ8N1N2 210 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 CFHR4Q92496 578 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 PINX1Q96BK5 328 aaKnown RBP6.52□□□□□ -1.37
HMGCR-202ENST00000343975 FOXA2Q9Y261 457 aaPredicted RBP6.52□□□□□ -1.37
HMGCR-202ENST00000343975 SMG1Q96Q15 3661 aaKnown RBP6.52□□□□□ -1.37
HMGCR-202ENST00000343975 FXYD6-FXYD2A0A087WZ82 144 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 SSSCA1O60232 199 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 IAPPP10997 89 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 SLC25A6P12236 298 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 HTR2BP41595 481 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 NKX2-5P52952 324 aaPredicted RBP6.52□□□□□ -1.37
HMGCR-202ENST00000343975 EBI3Q14213 229 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 UTF1Q5T230 341 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 S100A7AQ86SG5 101 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 LRTM2Q8N967 370 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 ZNF709Q8N972 641 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 LFNGQ8NES3 379 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 NPBQ8NG41 125 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 OR5T1Q8NG75 326 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 MAGT1Q9H0U3 335 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 ZNF257Q9Y2Q1 563 aa6.52□□□□□ -1.37
HMGCR-202ENST00000343975 MAST4O15021 2626 aa6.51□□□□□ -1.37
HMGCR-202ENST00000343975 APELAP0DMC3 54 aa6.51□□□□□ -1.37
HMGCR-202ENST00000343975 NPBWR1P48145 328 aa6.51□□□□□ -1.37
HMGCR-202ENST00000343975 KRTAP1-1Q07627 177 aa6.51□□□□□ -1.37
HMGCR-202ENST00000343975 FAM209BQ5JX69 171 aa6.51□□□□□ -1.37
HMGCR-202ENST00000343975 OR5M8Q8NGP6 311 aa6.51□□□□□ -1.37
HMGCR-202ENST00000343975 OR2T35Q8NGX2 323 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms