RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 MUC15Q8N387 334 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 CDX2Q99626 313 aaPredicted RBP8□□□□□ -1.13
HOXA1-201ENST00000343060 PHF7Q9BWX1 381 aaPredicted RBP8□□□□□ -1.13
HOXA1-201ENST00000343060 SEPSECSQ9HD40 501 aaKnown RBP8□□□□□ -1.13
HOXA1-201ENST00000343060 TRAV9-2A0A087WT02 112 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 PINLYPA6NC86 204 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 TNFSF4P23510 183 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 GDF1P27539 372 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 DUTP33316 252 aaKnown RBP8□□□□□ -1.13
HOXA1-201ENST00000343060 PRR20EP86478 221 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 PRR20CP86479 221 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 PRR20DP86480 221 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 PRR20BP86481 221 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 PRR20AP86496 221 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 KIAA1644Q3SXP7 199 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 FBLN7Q53RD9 439 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 VASH2Q86V25 355 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 STPG3Q8N7X2 389 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 ZNF439Q8NDP4 499 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 Q8TCH9 128 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 FAM216AQ8WUB2 273 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 NINJ1Q92982 152 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 COQ2Q96H96 371 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 CLEC7AQ9BXN2 247 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 NPVFQ9HCQ7 196 aa8□□□□□ -1.13
HOXA1-201ENST00000343060 TRAV30A0A087WSZ9 112 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 FNDC10F2Z333 226 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 H0YJW9 148 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 IGLV2-8P01709 118 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 CEACAM8P31997 349 aaPredicted RBP7.99□□□□□ -1.13
HOXA1-201ENST00000343060 HINT1P49773 126 aaPredicted RBP7.99□□□□□ -1.13
HOXA1-201ENST00000343060 ARG2P78540 354 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 RHOGP84095 191 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 KLF5Q13887 457 aaPredicted RBP7.99□□□□□ -1.13
HOXA1-201ENST00000343060 GABRA6Q16445 453 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 PRR7Q8TB68 274 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 C18orf32Q8TCD1 76 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 IGF2BP2-AS1Q96M15 143 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 WNT10AQ9GZT5 417 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 TMEM167BQ9NRX6 74 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 CACNA1EQ15878 2313 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 TRAV34A0A0B4J273 112 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 IZUMO1RA6ND01 250 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 HELTA6NFD8 242 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 GDF9O60383 454 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 PLGLB1Q02325 96 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 FOXF2Q12947 444 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 GCNT2Q8N0V5 402 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 OR8B3Q8NGG8 313 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 BORCS7Q96B45 105 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 OR8B2Q96RD0 313 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 TUBG2Q9NRH3 451 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 IL19Q9UHD0 177 aa7.99□□□□□ -1.13
HOXA1-201ENST00000343060 FOXH1O75593 365 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 CGAP01215 116 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 APCSP02743 223 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 CEBPDP49716 269 aaPredicted RBP7.98□□□□□ -1.13
HOXA1-201ENST00000343060 ZXDAP98168 799 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 RELBQ01201 579 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 Q0VFX4 171 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 RAB30Q15771 203 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 PRAMEF5Q5TYX0 476 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 PRAMEF6Q5VXH4 476 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 PQLC2Q6ZP29 291 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 SSMEM1Q8WWF3 244 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 COMMD5Q9GZQ3 224 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 RNASE7Q9H1E1 156 aaKnown RBP7.98□□□□□ -1.13
HOXA1-201ENST00000343060 HEYLQ9NQ87 328 aaPredicted RBP7.98□□□□□ -1.13
HOXA1-201ENST00000343060 LINC00869P0C866 280 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 FOLR3P41439 243 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 LINC00205P59089 165 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 MAJINQ3KP22 176 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 TIGITQ495A1 244 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 TEPPQ6URK8 271 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 Q6ZVH6 145 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 DOLPP1Q86YN1 238 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 FAM19A2Q8N3H0 131 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 C1RLQ9NZP8 487 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 HCFC1P51610 2035 aa7.98□□□□□ -1.13
HOXA1-201ENST00000343060 TET2Q6N021 2002 aaPredicted RBP7.98□□□□□ -1.13
HOXA1-201ENST00000343060 FAM181BA6NEQ2 426 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 PROP1O75360 226 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 CRYBB3P26998 211 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 LRRC10Q5BKY1 277 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 LCN12Q6JVE5 192 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 PPP1R32Q7Z5V6 425 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 OR4A16Q8NH70 328 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 MBD6Q96DN6 1003 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 BOKQ9UMX3 212 aaPredicted RBP7.97□□□□□ -1.13
HOXA1-201ENST00000343060 PSG11Q9UQ72 335 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 TCF19Q9Y242 345 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 C2orf70A6NJV1 201 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 IQCF6A8MYZ5 107 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 C15orf65H3BRN8 121 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 SMPD2O60906 423 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 OR2J3O76001 311 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 TNFSF15O95150 251 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 PPOXP50336 477 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 AESQ08117 197 aa7.97□□□□□ -1.13
HOXA1-201ENST00000343060 SLAQ13239 276 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms