RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 OPN1MW3P0DN78 364 aa10.84□□□□□ -0.67
COL18A1-201ENST00000342220 NUDT10Q8NFP7 164 aa10.84□□□□□ -0.67
COL18A1-201ENST00000342220 NIPSNAP3BQ9BS92 247 aa10.84□□□□□ -0.67
COL18A1-201ENST00000342220 RNF24Q9Y225 148 aa10.84□□□□□ -0.67
COL18A1-201ENST00000342220 OR2W1Q9Y3N9 320 aa10.84□□□□□ -0.67
COL18A1-201ENST00000342220 A0A0G2JRQ6 117 aa10.83□□□□□ -0.67
COL18A1-201ENST00000342220 J3QW42 95 aa10.83□□□□□ -0.67
COL18A1-201ENST00000342220 CCL25O15444 150 aa10.83□□□□□ -0.67
COL18A1-201ENST00000342220 UCP1P25874 307 aa10.83□□□□□ -0.67
COL18A1-201ENST00000342220 ID3Q02535 119 aa10.83□□□□□ -0.67
COL18A1-201ENST00000342220 LYPD2Q6UXB3 125 aa10.83□□□□□ -0.67
COL18A1-201ENST00000342220 Q6ZS49 121 aa10.83□□□□□ -0.67
COL18A1-201ENST00000342220 TVP23CQ96ET8 276 aa10.83□□□□□ -0.67
COL18A1-201ENST00000342220 ODAMA1E959 279 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 FAM90A10PA6NDY2 464 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 FAM90A18PA6NE21 464 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 FAM90A16PA6NEW6 464 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 FAM90A20PA6NIJ5 464 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 FAM90A8PA6NJQ4 464 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 FAM90A7PA6NKC0 464 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 FAM90A22PA8MWA6 464 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 FAM90A12PA8MX19 464 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 FAM90A5PA8MXJ8 464 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 FAM90A23PA8MXZ1 464 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 SRP19P09132 144 aaKnown RBP10.83□□□□□ -0.68
COL18A1-201ENST00000342220 FAM90A15PP0C7V4 464 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 FAM90A13PP0C7W8 464 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 FAM90A14PP0C7W9 464 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 FAM90A24PP0C7X0 464 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 IAPPP10997 89 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 VDAC1P21796 283 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 VKORC1L1Q8N0U8 176 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 LYG1Q8N1E2 194 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 FKBP11Q9NYL4 201 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 PLXNB1O43157 2135 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 HSBP1L1C9JCN9 74 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 PAX9P55771 341 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 IGFBPL1Q8WX77 278 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 TMEM18Q96B42 140 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 CREBBPQ92793 2442 aa10.83□□□□□ -0.68
COL18A1-201ENST00000342220 TNCP24821 2201 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.82□□□□□ -0.68
COL18A1-201ENST00000342220 PGLYRP1O75594 196 aaPredicted RBP10.82□□□□□ -0.68
COL18A1-201ENST00000342220 ERVK11-1P61568 191 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 ICAM4Q14773 271 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 COL5A1-AS1Q5SY13 56 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 PRAMEF5Q5TYX0 476 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 CYB561D1Q8N8Q1 229 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 PRORYQ9H606 182 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 KIAA1456Q9P272 454 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 HECTD1Q9ULT8 2610 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 A0A087WWC5 75 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 SRRM5B3KS81 715 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 M0R1X1 148 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 ZNF146Q15072 292 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 RPL39P5Q59GN2 51 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 ALKBH7Q9BT30 221 aaPredicted RBP10.82□□□□□ -0.68
COL18A1-201ENST00000342220 CABLES2Q9BTV7 478 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 PPIAL4EA0A075B759 164 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 PPIAL4DF5H284 164 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 PPIAL4FP0DN26 164 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 COL8A2P25067 703 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 RPL31P62899 125 aaKnown RBP10.82□□□□□ -0.68
COL18A1-201ENST00000342220 CLEC12BQ2HXU8 276 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 PCSK4Q6UW60 755 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 ZNF497Q6ZNH5 498 aa10.82□□□□□ -0.68
COL18A1-201ENST00000342220 CLEC18AA5D8T8 446 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 NKX6-3A6NJ46 265 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 SHISA9B4DS77 424 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 APOBEC3AP31941 199 aaPredicted RBP10.81□□□□□ -0.68
COL18A1-201ENST00000342220 GPR12P47775 334 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 TMEM267Q0VDI3 215 aaPredicted RBP10.81□□□□□ -0.68
COL18A1-201ENST00000342220 ZNF66Q6ZN08 573 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 CLEC18CQ8NCF0 446 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 GNPNAT1Q96EK6 184 aaPredicted RBP10.81□□□□□ -0.68
COL18A1-201ENST00000342220 SDSLQ96GA7 329 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 TBX15Q96SF7 602 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 MS4A5Q9H3V2 200 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 SMDT1Q9H4I9 107 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 SLC25A10Q9UBX3 287 aaPredicted RBP10.81□□□□□ -0.68
COL18A1-201ENST00000342220 DSCAMO60469 2012 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 DYSFO75923 2080 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 LOC102724200A0A096LPH7 203 aaPredicted RBP10.81□□□□□ -0.68
COL18A1-201ENST00000342220 M0QZ24 198 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 FCGR3BO75015 233 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 COX7A1P24310 79 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 ATP6V1FQ16864 119 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 OR5D13Q8NGL4 314 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 GPR146Q96CH1 333 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 GSX1Q9H4S2 264 aaPredicted RBP10.81□□□□□ -0.68
COL18A1-201ENST00000342220 TUBG2Q9NRH3 451 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 TMEM106BQ9NUM4 274 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 IL19Q9UHD0 177 aa10.81□□□□□ -0.68
COL18A1-201ENST00000342220 TRGV10A0A0A0MS01 117 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 KIR2DL5BA0A0G2JN68 375 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 KIR2DL5BA0A0G2JPC4 375 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 OOEPA6NGQ2 149 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 TMEM238C9JI98 176 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 H0Y980 276 aa10.8□□□□□ -0.68
COL18A1-201ENST00000342220 C19orf84I3L1E1 186 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms