RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 CA2P00918 260 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 USF1P22415 310 aaPredicted RBP10.04□□□□□ -0.8
CDH5-201ENST00000341529 ERVFRD-1P60508 538 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 RPL30P62888 115 aaKnown RBP10.04□□□□□ -0.8
CDH5-201ENST00000341529 HIST3H3Q16695 136 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 FAM209BQ5JX69 171 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 LOXL4Q96JB6 756 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 ZNF503-AS2A6NEH8 195 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 CBLN1P23435 193 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 CD24P25063 80 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 OTX1P32242 354 aaPredicted RBP10.04□□□□□ -0.8
CDH5-201ENST00000341529 RPL8P62917 257 aaKnown RBP10.04□□□□□ -0.8
CDH5-201ENST00000341529 ID3Q02535 119 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 KIR3DL3Q8N743 410 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 ABHD17AQ96GS6 310 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 TMEM167BQ9NRX6 74 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 CHD9Q3L8U1 2897 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 ZFYVE26Q68DK2 2539 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 CDX4O14627 284 aaPredicted RBP10.04□□□□□ -0.8
CDH5-201ENST00000341529 COL8A1P27658 744 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 KIR2DS2P43631 304 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 PRRX1P54821 245 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 WDR82Q6UXN9 313 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 EIF4E3Q8N5X7 224 aaKnown RBP10.04□□□□□ -0.8
CDH5-201ENST00000341529 VSTM2AQ8TAG5 236 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 LSM10Q969L4 123 aaKnown RBP10.04□□□□□ -0.8
CDH5-201ENST00000341529 NPCDR1Q9BY65 106 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 PLSCR2Q9NRY7 297 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 PITPNC1Q9UKF7 332 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 TMEM56-RWDD3S4R434 201 aa10.04□□□□□ -0.8
CDH5-201ENST00000341529 GNG7O60262 68 aa10.03□□□□□ -0.8
CDH5-201ENST00000341529 ACAA1P09110 424 aaPredicted RBP10.03□□□□□ -0.8
CDH5-201ENST00000341529 IGFBP2P18065 325 aa10.03□□□□□ -0.8
CDH5-201ENST00000341529 HERPUD1Q15011 391 aa10.03□□□□□ -0.8
CDH5-201ENST00000341529 WASHC3Q9Y3C0 194 aa10.03□□□□□ -0.8
CDH5-201ENST00000341529 OR2J3O76001 311 aa10.03□□□□□ -0.8
CDH5-201ENST00000341529 NAPSAO96009 420 aa10.03□□□□□ -0.8
CDH5-201ENST00000341529 MYOD1P15172 320 aa10.03□□□□□ -0.8
CDH5-201ENST00000341529 UBTD1Q9HAC8 227 aa10.03□□□□□ -0.8
CDH5-201ENST00000341529 CGAP01215 116 aa10.03□□□□□ -0.8
CDH5-201ENST00000341529 AGAP20933 346 aa10.03□□□□□ -0.8
CDH5-201ENST00000341529 HTR1DP28221 377 aa10.03□□□□□ -0.8
CDH5-201ENST00000341529 HLA-DRB5Q30154 266 aa10.03□□□□□ -0.8
CDH5-201ENST00000341529 S100A7AQ86SG5 101 aa10.03□□□□□ -0.8
CDH5-201ENST00000341529 STPG3Q8N7X2 389 aa10.03□□□□□ -0.8
CDH5-201ENST00000341529 ELOVL1Q9BW60 279 aa10.03□□□□□ -0.8
CDH5-201ENST00000341529 PDE6DO43924 150 aa10.02□□□□□ -0.8
CDH5-201ENST00000341529 ECSCRQ19T08 205 aa10.02□□□□□ -0.8
CDH5-201ENST00000341529 ZNF324BQ6AW86 544 aaPredicted RBP10.02□□□□□ -0.8
CDH5-201ENST00000341529 SLC35E4Q6ICL7 350 aa10.02□□□□□ -0.8
CDH5-201ENST00000341529 OR4F17Q8NGA8 305 aa10.02□□□□□ -0.8
CDH5-201ENST00000341529 OR4D5Q8NGN0 318 aa10.02□□□□□ -0.8
CDH5-201ENST00000341529 RAB1CQ92928 201 aa10.02□□□□□ -0.8
CDH5-201ENST00000341529 TBX15Q96SF7 602 aa10.02□□□□□ -0.8
CDH5-201ENST00000341529 HSPB9Q9BQS6 159 aa10.02□□□□□ -0.8
CDH5-201ENST00000341529 PAXXQ9BUH6 204 aa10.02□□□□□ -0.8
CDH5-201ENST00000341529 COA4Q9NYJ1 87 aa10.02□□□□□ -0.8
CDH5-201ENST00000341529 NAGKQ9UJ70 344 aa10.02□□□□□ -0.8
CDH5-201ENST00000341529 NUBP1P53384 320 aa10.02□□□□□ -0.81
CDH5-201ENST00000341529 CD81P60033 236 aa10.02□□□□□ -0.81
CDH5-201ENST00000341529 ICAM4Q14773 271 aa10.02□□□□□ -0.81
CDH5-201ENST00000341529 GFI1BQ5VTD9 330 aa10.02□□□□□ -0.81
CDH5-201ENST00000341529 SMIM15Q7Z3B0 74 aa10.02□□□□□ -0.81
CDH5-201ENST00000341529 CLDND2Q8NHS1 167 aa10.02□□□□□ -0.81
CDH5-201ENST00000341529 ANAPC16Q96DE5 110 aa10.02□□□□□ -0.81
CDH5-201ENST00000341529 PGPA6NDG6 321 aa10.02□□□□□ -0.81
CDH5-201ENST00000341529 KBTBD11O94819 623 aa10.02□□□□□ -0.81
CDH5-201ENST00000341529 GLRXP35754 106 aa10.02□□□□□ -0.81
CDH5-201ENST00000341529 RPL27AP46776 148 aaKnown RBP10.02□□□□□ -0.81
CDH5-201ENST00000341529 RNF151Q2KHN1 245 aa10.02□□□□□ -0.81
CDH5-201ENST00000341529 LRRC75BQ2VPJ9 315 aa10.02□□□□□ -0.81
CDH5-201ENST00000341529 NABP2Q9BQ15 211 aa10.02□□□□□ -0.81
CDH5-201ENST00000341529 CGB1A6NKQ9 187 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 IGKV1-5P01602 117 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 ZNF506Q5JVG8 444 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 ATOH7Q8N100 152 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 IL19Q9UHD0 177 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 IGHV3OR16-10A0A075B7F0 116 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 IGKV1-6A0A0C4DH72 117 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 SCO2A0A1W2PP80 73 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 LINC00587B1AMM8 73 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 CD82P27701 267 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 RASL11BQ9BPW5 248 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 AAMDCQ9H7C9 122 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 IDI2-AS1Q9NZ38 188 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 HNRNPA3P51991 378 aaKnown RBP10.01□□□□□ -0.81
CDH5-201ENST00000341529 C10orf55Q5SWW7 151 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 OR4A47Q6IF82 309 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 PRNTQ86SH4 94 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 GGACTQ9BVM4 153 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 ZNRD1Q9P1U0 126 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 TMEM50AO95807 157 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 MPZP25189 248 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 RPRMLQ8N4K4 120 aa10.01□□□□□ -0.81
CDH5-201ENST00000341529 MRPL37Q9BZE1 423 aaKnown RBP10.01□□□□□ -0.81
CDH5-201ENST00000341529 PLXNB1O43157 2135 aa10□□□□□ -0.81
CDH5-201ENST00000341529 VCANP13611 3396 aa10□□□□□ -0.81
CDH5-201ENST00000341529 MUC21A0A0G2JKD1 596 aa10□□□□□ -0.81
CDH5-201ENST00000341529 MUC21A0A140T8X8 626 aa10□□□□□ -0.81
CDH5-201ENST00000341529 C1QTNF9P0C862 333 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms