RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 PDE6DO43924 150 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 PROP1O75360 226 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 SOX8P57073 446 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 NRN1LQ496H8 165 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 Q8TCH9 128 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 TAAR6Q96RI8 345 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 PIGBOS1A0A0B4J2F0 54 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 IGFBP2P18065 325 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 OR10J1P30954 320 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 PSG5Q15238 335 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 VWA1Q6PCB0 445 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 ZCCHC14Q8WYQ9 949 aaKnown RBP13.38□□□□□ -0.27
SCARB1-202ENST00000339570 SSBP3Q9BWW4 388 aaPredicted RBP13.38□□□□□ -0.27
SCARB1-202ENST00000339570 WNT10AQ9GZT5 417 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 WDR83OSQ9Y284 106 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 NAV3Q8IVL0 2385 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 CYC1P08574 325 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 WNT2P09544 360 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 SPRNQ5BIV9 151 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 ACP7Q6ZNF0 438 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 MIR17HGQ75NE6 70 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 NEU1Q99519 415 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 TIMM8BQ9Y5J9 83 aaPredicted RBP13.38□□□□□ -0.27
SCARB1-202ENST00000339570 NPIPB11E5RHQ5 1161 aa13.37□□□□□ -0.27
SCARB1-202ENST00000339570 TNFSF10P50591 281 aa13.37□□□□□ -0.27
SCARB1-202ENST00000339570 WDR82Q6UXN9 313 aa13.37□□□□□ -0.27
SCARB1-202ENST00000339570 PQLC2Q6ZP29 291 aa13.37□□□□□ -0.27
SCARB1-202ENST00000339570 UHRF2Q96PU4 802 aa13.37□□□□□ -0.27
SCARB1-202ENST00000339570 VAMP8Q9BV40 100 aa13.37□□□□□ -0.27
SCARB1-202ENST00000339570 GGTLC1Q9BX51 225 aa13.37□□□□□ -0.27
SCARB1-202ENST00000339570 ZNF134P52741 427 aa13.37□□□□□ -0.27
SCARB1-202ENST00000339570 COA6Q5JTJ3 125 aaKnown RBP13.37□□□□□ -0.27
SCARB1-202ENST00000339570 CD177Q8N6Q3 437 aa13.37□□□□□ -0.27
SCARB1-202ENST00000339570 TMEM140Q9NV12 185 aa13.37□□□□□ -0.27
SCARB1-202ENST00000339570 CSMD1Q96PZ7 3565 aa13.37□□□□□ -0.27
SCARB1-202ENST00000339570 VENTXO95231 258 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 TDGF1P3P51864 188 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 SRSF6Q13247 344 aaKnown RBP13.36□□□□□ -0.27
SCARB1-202ENST00000339570 DUX4L9Q6RFH8 374 aaPredicted RBP13.36□□□□□ -0.27
SCARB1-202ENST00000339570 Q6ZVH6 145 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 STPG3Q8N7X2 389 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 GP6Q9HCN6 339 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 TMEM106BQ9NUM4 274 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 TP53TG3Q9ULZ0 132 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.36□□□□□ -0.27
SCARB1-202ENST00000339570 KLRC4-KLRK1H3BQV0 150 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 TPPP2P59282 170 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 TMEM164Q5U3C3 297 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 PRR27Q6MZM9 219 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 Q8N7P7 452 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 RND1Q92730 232 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 S1PR3Q99500 378 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 IL6RP08887 468 aaPredicted RBP13.36□□□□□ -0.27
SCARB1-202ENST00000339570 AMTP48728 403 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 C1orf194Q5T5A4 169 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 C11orf53Q8IXP5 236 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 OR5AU1Q8NGC0 362 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 DIRC2Q96SL1 478 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 KCNIP2Q9NS61 270 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 RPH3ALQ9UNE2 315 aa13.36□□□□□ -0.27
SCARB1-202ENST00000339570 SPRY3O43610 288 aa13.35□□□□□ -0.27
SCARB1-202ENST00000339570 GCHFRP30047 84 aa13.35□□□□□ -0.27
SCARB1-202ENST00000339570 PRDX2P32119 198 aa13.35□□□□□ -0.27
SCARB1-202ENST00000339570 DUTP33316 252 aaKnown RBP13.35□□□□□ -0.27
SCARB1-202ENST00000339570 CCL11P51671 97 aa13.35□□□□□ -0.27
SCARB1-202ENST00000339570 ERASQ7Z444 233 aa13.35□□□□□ -0.27
SCARB1-202ENST00000339570 LYG1Q8N1E2 194 aa13.35□□□□□ -0.27
SCARB1-202ENST00000339570 ST6GALNAC3Q8NDV1 305 aa13.35□□□□□ -0.27
SCARB1-202ENST00000339570 PLEKHA3Q9HB20 300 aa13.35□□□□□ -0.27
SCARB1-202ENST00000339570 PDLIM4P50479 330 aa13.35□□□□□ -0.27
SCARB1-202ENST00000339570 C1orf229Q6ZS94 237 aaPredicted RBP13.35□□□□□ -0.27
SCARB1-202ENST00000339570 MMD2Q8IY49 270 aa13.35□□□□□ -0.27
SCARB1-202ENST00000339570 LINC00479Q96M42 142 aa13.35□□□□□ -0.27
SCARB1-202ENST00000339570 ENY2Q9NPA8 101 aa13.35□□□□□ -0.27
SCARB1-202ENST00000339570 TCF19Q9Y242 345 aa13.35□□□□□ -0.27
SCARB1-202ENST00000339570 CD46P15529 392 aa13.34□□□□□ -0.27
SCARB1-202ENST00000339570 EFNB3Q15768 340 aa13.34□□□□□ -0.27
SCARB1-202ENST00000339570 SIGLECL1Q8N7X8 197 aa13.34□□□□□ -0.27
SCARB1-202ENST00000339570 TNFSF15O95150 251 aa13.34□□□□□ -0.27
SCARB1-202ENST00000339570 SUMO1P63165 101 aaKnown RBP13.34□□□□□ -0.27
SCARB1-202ENST00000339570 LCN2P80188 198 aa13.34□□□□□ -0.27
SCARB1-202ENST00000339570 BEND2Q8NDZ0 799 aa13.34□□□□□ -0.27
SCARB1-202ENST00000339570 CXorf1O96002 111 aa13.34□□□□□ -0.27
SCARB1-202ENST00000339570 PLAUP00749 431 aa13.34□□□□□ -0.27
SCARB1-202ENST00000339570 P0C879 139 aa13.34□□□□□ -0.27
SCARB1-202ENST00000339570 CENPWQ5EE01 88 aa13.34□□□□□ -0.27
SCARB1-202ENST00000339570 ARSJQ5FYB0 599 aaPredicted RBP13.34□□□□□ -0.27
SCARB1-202ENST00000339570 ZNF766Q5HY98 468 aa13.34□□□□□ -0.27
SCARB1-202ENST00000339570 CENPVQ7Z7K6 275 aaPredicted RBP13.34□□□□□ -0.27
SCARB1-202ENST00000339570 RCHY1Q96PM5 261 aa13.34□□□□□ -0.27
SCARB1-202ENST00000339570 TMEM208Q9BTX3 173 aa13.34□□□□□ -0.27
SCARB1-202ENST00000339570 CA2P00918 260 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 LINC00310P59036 64 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 SLC35E4Q6ICL7 350 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 TMEM144Q7Z5S9 345 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 TECTAO75443 2155 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 APELAP0DMC3 54 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 MMDQ15546 238 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 SMIM21Q3B7S5 101 aa13.33□□□□□ -0.28
SCARB1-202ENST00000339570 SNRNP40Q96DI7 357 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms